RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 LOC107984156A0A0G2JMH3 177 aa4.54□□□□□ -1.68
HMGB3P1-201ENST00000393368 C20orf202A1L168 122 aa4.54□□□□□ -1.68
HMGB3P1-201ENST00000393368 H3BS24 57 aa4.54□□□□□ -1.68
HMGB3P1-201ENST00000393368 PRYO14603 147 aa4.54□□□□□ -1.68
HMGB3P1-201ENST00000393368 ARL17AQ8IVW1 177 aa4.54□□□□□ -1.68
HMGB3P1-201ENST00000393368 HIST1H2BLQ99880 126 aa4.54□□□□□ -1.68
HMGB3P1-201ENST00000393368 MIEN1Q9BRT3 115 aa4.54□□□□□ -1.68
HMGB3P1-201ENST00000393368 DDTP30046 118 aa4.53□□□□□ -1.68
HMGB3P1-201ENST00000393368 KRTAP13-2Q52LG2 175 aa4.53□□□□□ -1.68
HMGB3P1-201ENST00000393368 KCNQ1DNQ9H478 68 aa4.53□□□□□ -1.68
HMGB3P1-201ENST00000393368 SPANXB1Q9NS25 103 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P1-201ENST00000393368 KRTAP4-16G5E9R7 235 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P1-201ENST00000393368 S100A2P29034 98 aa4.52□□□□□ -1.69
HMGB3P1-201ENST00000393368 SPRR1AP35321 89 aa4.52□□□□□ -1.69
HMGB3P1-201ENST00000393368 RPL13AP40429 203 aaKnown RBP4.52□□□□□ -1.69
HMGB3P1-201ENST00000393368 SNRPEP62304 92 aaKnown RBP4.52□□□□□ -1.69
HMGB3P1-201ENST00000393368 PCP2Q8IVA1 136 aa4.52□□□□□ -1.69
HMGB3P1-201ENST00000393368 LINC00308Q8TCZ7 52 aa4.52□□□□□ -1.69
HMGB3P1-201ENST00000393368 TRBV10-2A0A0K0K1G8 114 aa4.51□□□□□ -1.69
HMGB3P1-201ENST00000393368 ETDCA0A1B0GVM5 59 aa4.51□□□□□ -1.69
HMGB3P1-201ENST00000393368 NDUFC2O95298 119 aa4.51□□□□□ -1.69
HMGB3P1-201ENST00000393368 TSPAN13O95857 204 aa4.51□□□□□ -1.69
HMGB3P1-201ENST00000393368 CRYGAP11844 174 aa4.51□□□□□ -1.69
HMGB3P1-201ENST00000393368 S100A7L2Q5SY68 101 aa4.51□□□□□ -1.69
HMGB3P1-201ENST00000393368 LINC00337Q8N6G1 96 aa4.51□□□□□ -1.69
HMGB3P1-201ENST00000393368 TYMSOSQ8TAI1 123 aa4.51□□□□□ -1.69
HMGB3P1-201ENST00000393368 SMCR5Q8TEV8 140 aa4.51□□□□□ -1.69
HMGB3P1-201ENST00000393368 B5MCH6 92 aa4.5□□□□□ -1.69
HMGB3P1-201ENST00000393368 TIMM17BO60830 172 aa4.5□□□□□ -1.69
HMGB3P1-201ENST00000393368 ERC2-IT1O76042 136 aa4.5□□□□□ -1.69
HMGB3P1-201ENST00000393368 SCGB1D1O95968 90 aa4.5□□□□□ -1.69
HMGB3P1-201ENST00000393368 IGLV6-57P01721 117 aa4.5□□□□□ -1.69
HMGB3P1-201ENST00000393368 SCGB1D4Q6XE38 83 aa4.5□□□□□ -1.69
HMGB3P1-201ENST00000393368 C3orf22Q8N5N4 141 aa4.5□□□□□ -1.69
HMGB3P1-201ENST00000393368 SPRR4Q96PI1 79 aa4.5□□□□□ -1.69
HMGB3P1-201ENST00000393368 PPDPFQ9H3Y8 114 aa4.5□□□□□ -1.69
HMGB3P1-201ENST00000393368 RNF213Q63HN8 5207 aa4.5□□□□□ -1.69
HMGB3P1-201ENST00000393368 TRAV23DV6A0A075B6W5 121 aa4.49□□□□□ -1.69
HMGB3P1-201ENST00000393368 FAM229BQ4G0N7 80 aa4.49□□□□□ -1.69
HMGB3P1-201ENST00000393368 OR13C6PQ8NH95 151 aa4.49□□□□□ -1.69
HMGB3P1-201ENST00000393368 Q9BRP9 147 aa4.49□□□□□ -1.69
HMGB3P1-201ENST00000393368 SPANXCQ9NY87 97 aa4.49□□□□□ -1.69
HMGB3P1-201ENST00000393368 S100A12P80511 92 aa4.48□□□□□ -1.69
HMGB3P1-201ENST00000393368 SPANXDQ9BXN6 97 aa4.48□□□□□ -1.69
HMGB3P1-201ENST00000393368 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
HMGB3P1-201ENST00000393368 C5orf52A6NGY3 159 aa4.47□□□□□ -1.69
HMGB3P1-201ENST00000393368 ZNF73O43830 326 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P1-201ENST00000393368 GAGE2AQ6NT46 116 aa4.47□□□□□ -1.69
HMGB3P1-201ENST00000393368 Q6ZRX8 168 aa4.47□□□□□ -1.69
HMGB3P1-201ENST00000393368 PRR4Q16378 134 aa4.46□□□□□ -1.7
HMGB3P1-201ENST00000393368 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
HMGB3P1-201ENST00000393368 MUSTN1Q8IVN3 82 aa4.46□□□□□ -1.7
HMGB3P1-201ENST00000393368 LINC00304Q8N9R0 145 aa4.46□□□□□ -1.7
HMGB3P1-201ENST00000393368 RETNLBQ9BQ08 111 aa4.46□□□□□ -1.7
HMGB3P1-201ENST00000393368 ZNF706Q9Y5V0 76 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P1-201ENST00000393368 HSBP1L1C9JCN9 74 aa4.45□□□□□ -1.7
HMGB3P1-201ENST00000393368 AKR1D1P51857 326 aa4.45□□□□□ -1.7
HMGB3P1-201ENST00000393368 ST20-AS1Q8NBB2 130 aa4.45□□□□□ -1.7
HMGB3P1-201ENST00000393368 IGLV9-49A0A0B4J1Y8 123 aa4.44□□□□□ -1.7
HMGB3P1-201ENST00000393368 LINC00483Q53H64 154 aa4.44□□□□□ -1.7
HMGB3P1-201ENST00000393368 A6NDN8 102 aa4.43□□□□□ -1.7
HMGB3P1-201ENST00000393368 IFITM1P13164 125 aa4.43□□□□□ -1.7
HMGB3P1-201ENST00000393368 C6orf99Q4VX62 202 aa4.43□□□□□ -1.7
HMGB3P1-201ENST00000393368 LINC00518Q8N0U6 118 aa4.43□□□□□ -1.7
HMGB3P1-201ENST00000393368 Q8NBF4 154 aa4.43□□□□□ -1.7
HMGB3P1-201ENST00000393368 MOBPQ13875 183 aa4.42□□□□□ -1.7
HMGB3P1-201ENST00000393368 JOSD1Q15040 202 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P1-201ENST00000393368 COX7BP24311 80 aa4.41□□□□□ -1.7
HMGB3P1-201ENST00000393368 HINT1P49773 126 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P1-201ENST00000393368 ELOF1P60002 83 aaKnown RBP4.41□□□□□ -1.7
HMGB3P1-201ENST00000393368 Q6ZVH6 145 aa4.41□□□□□ -1.7
HMGB3P1-201ENST00000393368 COPS9Q8WXC6 57 aa4.41□□□□□ -1.7
HMGB3P1-201ENST00000393368 C12orf57Q99622 126 aa4.41□□□□□ -1.7
HMGB3P1-201ENST00000393368 PAM16Q9Y3D7 125 aa4.41□□□□□ -1.7
HMGB3P1-201ENST00000393368 COX8AP10176 69 aa4.4□□□□□ -1.71
HMGB3P1-201ENST00000393368 PCP4P48539 62 aa4.4□□□□□ -1.71
HMGB3P1-201ENST00000393368 SPATA45Q537H7 98 aa4.4□□□□□ -1.71
HMGB3P1-201ENST00000393368 C9orf153Q5TBE3 101 aa4.4□□□□□ -1.71
HMGB3P1-201ENST00000393368 C14orf144Q96I85 54 aa4.4□□□□□ -1.71
HMGB3P1-201ENST00000393368 CBY1Q9Y3M2 126 aa4.4□□□□□ -1.71
HMGB3P1-201ENST00000393368 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
HMGB3P1-201ENST00000393368 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
HMGB3P1-201ENST00000393368 DEFB105AQ8NG35 78 aa4.39□□□□□ -1.71
HMGB3P1-201ENST00000393368 SMIM11BQ8TCY0 68 aa4.39□□□□□ -1.71
HMGB3P1-201ENST00000393368 DHRS4-AS1Q9P1J3 65 aa4.39□□□□□ -1.71
HMGB3P1-201ENST00000393368 MUC2Q02817 5179 aa4.38□□□□□ -1.71
HMGB3P1-201ENST00000393368 TRAV13-2A0A0B4J235 113 aa4.38□□□□□ -1.71
HMGB3P1-201ENST00000393368 HIST1H4GQ99525 98 aa4.38□□□□□ -1.71
HMGB3P1-201ENST00000393368 VAMP8Q9BV40 100 aa4.38□□□□□ -1.71
HMGB3P1-201ENST00000393368 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
HMGB3P1-201ENST00000393368 A0A1B0GWB2 263 aa4.37□□□□□ -1.71
HMGB3P1-201ENST00000393368 Q1RN00 199 aa4.37□□□□□ -1.71
HMGB3P1-201ENST00000393368 SPAG11AQ6PDA7 123 aa4.37□□□□□ -1.71
HMGB3P1-201ENST00000393368 TRBV7-6A0A0J9YX20 115 aa4.36□□□□□ -1.71
HMGB3P1-201ENST00000393368 DLEU1O43261 78 aa4.36□□□□□ -1.71
HMGB3P1-201ENST00000393368 SPRR1BP22528 89 aa4.36□□□□□ -1.71
HMGB3P1-201ENST00000393368 HRCT1Q6UXD1 115 aa4.36□□□□□ -1.71
HMGB3P1-201ENST00000393368 C2orf91Q6ZV80 131 aa4.36□□□□□ -1.71
HMGB3P1-201ENST00000393368 IGLV7-46A0A075B6I9 117 aa4.35□□□□□ -1.71
HMGB3P1-201ENST00000393368 H7C2G1 150 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 203.8 ms