RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 COX7B2Q8TF08 81 aa7.74□□□□□ -1.17
TRAF3IP2-208ENST00000392556 IGHV3-73A0A0B4J1V6 119 aa7.73□□□□□ -1.17
TRAF3IP2-208ENST00000392556 MRPL55Q7Z7F7 128 aaKnown RBP7.73□□□□□ -1.17
TRAF3IP2-208ENST00000392556 K7EQD1 137 aa7.73□□□□□ -1.17
TRAF3IP2-208ENST00000392556 IGHV3-53P01767 116 aa7.73□□□□□ -1.17
TRAF3IP2-208ENST00000392556 LINC00158P58513 81 aa7.73□□□□□ -1.17
TRAF3IP2-208ENST00000392556 Q6ZSN1 163 aa7.73□□□□□ -1.17
TRAF3IP2-208ENST00000392556 CELA1Q9UNI1 258 aa7.73□□□□□ -1.17
TRAF3IP2-208ENST00000392556 KMT2AQ03164 3969 aa7.73□□□□□ -1.17
TRAF3IP2-208ENST00000392556 hDV103S1A0JD37 113 aa7.72□□□□□ -1.17
TRAF3IP2-208ENST00000392556 Q9UF83 564 aa7.72□□□□□ -1.17
TRAF3IP2-208ENST00000392556 DNAH6Q9C0G6 4158 aa7.72□□□□□ -1.17
TRAF3IP2-208ENST00000392556 A8MTW9 85 aa7.71□□□□□ -1.17
TRAF3IP2-208ENST00000392556 A0A087WZ39 114 aa7.7□□□□□ -1.18
TRAF3IP2-208ENST00000392556 BPY2O14599 106 aa7.7□□□□□ -1.18
TRAF3IP2-208ENST00000392556 CDC42SE2Q9NRR3 84 aa7.7□□□□□ -1.18
TRAF3IP2-208ENST00000392556 TRBV10-1A0A0K0K1A3 114 aa7.7□□□□□ -1.18
TRAF3IP2-208ENST00000392556 DNAH10Q8IVF4 4471 aa7.7□□□□□ -1.18
TRAF3IP2-208ENST00000392556 Q6ZRP5 223 aa7.69□□□□□ -1.18
TRAF3IP2-208ENST00000392556 NTM-AS1Q6ZSK4 140 aa7.69□□□□□ -1.18
TRAF3IP2-208ENST00000392556 UBE2DNLQ8IWF7 75 aa7.69□□□□□ -1.18
TRAF3IP2-208ENST00000392556 H3BQ85 93 aa7.69□□□□□ -1.18
TRAF3IP2-208ENST00000392556 SPINK13Q1W4C9 94 aa7.69□□□□□ -1.18
TRAF3IP2-208ENST00000392556 A0A1B0GVY2 172 aa7.68□□□□□ -1.18
TRAF3IP2-208ENST00000392556 LYRM9A8MSI8 78 aa7.68□□□□□ -1.18
TRAF3IP2-208ENST00000392556 VPS13DQ5THJ4 4388 aa7.68□□□□□ -1.18
TRAF3IP2-208ENST00000392556 OCR1Q9BZK8 76 aa7.67□□□□□ -1.18
TRAF3IP2-208ENST00000392556 INSP01308 110 aa7.67□□□□□ -1.18
TRAF3IP2-208ENST00000392556 IGKV3-20P01619 116 aa7.67□□□□□ -1.18
TRAF3IP2-208ENST00000392556 Q6ZR54 194 aa7.66□□□□□ -1.18
TRAF3IP2-208ENST00000392556 KTN1-AS1Q86SY8 53 aa7.66□□□□□ -1.18
TRAF3IP2-208ENST00000392556 M0R2N4 97 aa7.66□□□□□ -1.18
TRAF3IP2-208ENST00000392556 KRTAP17-1Q9BYP8 105 aa7.66□□□□□ -1.18
TRAF3IP2-208ENST00000392556 RBM12B-AS1Q9P1G2 102 aa7.66□□□□□ -1.18
TRAF3IP2-208ENST00000392556 HERC2O95714 4834 aa7.65□□□□□ -1.18
TRAF3IP2-208ENST00000392556 RTL8CO15255 209 aa7.65□□□□□ -1.18
TRAF3IP2-208ENST00000392556 FRAS1Q86XX4 4008 aa7.65□□□□□ -1.19
TRAF3IP2-208ENST00000392556 HECTD4Q9Y4D8 3996 aa7.64□□□□□ -1.19
TRAF3IP2-208ENST00000392556 LINC00575Q6W349 94 aa7.64□□□□□ -1.19
TRAF3IP2-208ENST00000392556 C4orf48Q5BLP8 95 aa7.63□□□□□ -1.19
TRAF3IP2-208ENST00000392556 LINC00588Q9Y4M8 146 aa7.63□□□□□ -1.19
TRAF3IP2-208ENST00000392556 UBE2BP63146 152 aa7.63□□□□□ -1.19
TRAF3IP2-208ENST00000392556 C1orf134Q5TEV5 83 aa7.63□□□□□ -1.19
TRAF3IP2-208ENST00000392556 TRAV22A0A0B4J277 110 aa7.62□□□□□ -1.19
TRAF3IP2-208ENST00000392556 C16orf74Q96GX8 76 aa7.62□□□□□ -1.19
TRAF3IP2-208ENST00000392556 TOMM7Q9P0U1 55 aa7.62□□□□□ -1.19
TRAF3IP2-208ENST00000392556 HTN3P15516 51 aa7.61□□□□□ -1.19
TRAF3IP2-208ENST00000392556 CD164L2Q6UWJ8 174 aa7.61□□□□□ -1.19
TRAF3IP2-208ENST00000392556 C1orf64Q8NEQ6 169 aa7.6□□□□□ -1.19
TRAF3IP2-208ENST00000392556 NDUFS5O43920 106 aa7.6□□□□□ -1.19
TRAF3IP2-208ENST00000392556 HIGD2AQ9BW72 106 aa7.6□□□□□ -1.19
TRAF3IP2-208ENST00000392556 IGHV3OR16-9A0A0B4J2B5 98 aa7.59□□□□□ -1.19
TRAF3IP2-208ENST00000392556 SYCNQ0VAF6 134 aa7.59□□□□□ -1.19
TRAF3IP2-208ENST00000392556 M0R378 163 aa7.59□□□□□ -1.2
TRAF3IP2-208ENST00000392556 CYP4F30PQ9H0H9 118 aa7.59□□□□□ -1.2
TRAF3IP2-208ENST00000392556 PSPHP1O15172 72 aa7.58□□□□□ -1.2
TRAF3IP2-208ENST00000392556 IGKV4-1P06312 121 aa7.58□□□□□ -1.2
TRAF3IP2-208ENST00000392556 NBDYA0A0U1RRE5 68 aa7.57□□□□□ -1.2
TRAF3IP2-208ENST00000392556 DEFB130BP0DP73 79 aa7.57□□□□□ -1.2
TRAF3IP2-208ENST00000392556 DEFB130AP0DP74 79 aa7.57□□□□□ -1.2
TRAF3IP2-208ENST00000392556 H3BNG1 76 aa7.57□□□□□ -1.2
TRAF3IP2-208ENST00000392556 HTN1P15515 57 aa7.57□□□□□ -1.2
TRAF3IP2-208ENST00000392556 SCXQ7RTU7 201 aa7.57□□□□□ -1.2
TRAF3IP2-208ENST00000392556 DNAH17Q9UFH2 4485 aa7.57□□□□□ -1.2
TRAF3IP2-208ENST00000392556 UBE2L6O14933 153 aa7.56□□□□□ -1.2
TRAF3IP2-208ENST00000392556 C6orf99Q4VX62 202 aa7.56□□□□□ -1.2
TRAF3IP2-208ENST00000392556 PHF5AQ7RTV0 110 aaKnown RBP7.56□□□□□ -1.2
TRAF3IP2-208ENST00000392556 LINC00612Q8N6U2 182 aa7.56□□□□□ -1.2
TRAF3IP2-208ENST00000392556 PSCAO43653 123 aa7.55□□□□□ -1.2
TRAF3IP2-208ENST00000392556 FAT2Q9NYQ8 4349 aa7.54□□□□□ -1.2
TRAF3IP2-208ENST00000392556 CDK2AP2O75956 126 aa7.54□□□□□ -1.2
TRAF3IP2-208ENST00000392556 UBE2AP49459 152 aa7.54□□□□□ -1.2
TRAF3IP2-208ENST00000392556 ZCCHC13Q8WW36 166 aaKnown RBP7.54□□□□□ -1.2
TRAF3IP2-208ENST00000392556 LRCOL1A6NCL2 159 aa7.54□□□□□ -1.2
TRAF3IP2-208ENST00000392556 DNAH11Q96DT5 4516 aa7.53□□□□□ -1.2
TRAF3IP2-208ENST00000392556 TRBV6-8A0A0A6YYG3 113 aa7.53□□□□□ -1.2
TRAF3IP2-208ENST00000392556 Q5VV11 94 aa7.53□□□□□ -1.2
TRAF3IP2-208ENST00000392556 KIAA1109Q2LD37 5005 aa7.53□□□□□ -1.2
TRAF3IP2-208ENST00000392556 A8MUN3 132 aa7.53□□□□□ -1.2
TRAF3IP2-208ENST00000392556 COX17Q14061 63 aa7.53□□□□□ -1.2
TRAF3IP2-208ENST00000392556 ATP11AUNQ6ZP68 121 aa7.53□□□□□ -1.2
TRAF3IP2-208ENST00000392556 NOP10Q9NPE3 64 aaKnown RBP7.53□□□□□ -1.2
TRAF3IP2-208ENST00000392556 PRR3P79522 188 aaKnown RBP7.52□□□□□ -1.21
TRAF3IP2-208ENST00000392556 Q8IZM0 81 aa7.52□□□□□ -1.21
TRAF3IP2-208ENST00000392556 LINC00269Q8N2A0 174 aa7.52□□□□□ -1.21
TRAF3IP2-208ENST00000392556 C16orf90A8MZG2 172 aa7.52□□□□□ -1.21
TRAF3IP2-208ENST00000392556 DNAH2Q9P225 4427 aa7.51□□□□□ -1.21
TRAF3IP2-208ENST00000392556 PRM2P04554 102 aa7.51□□□□□ -1.21
TRAF3IP2-208ENST00000392556 COX7BP24311 80 aa7.51□□□□□ -1.21
TRAF3IP2-208ENST00000392556 TNP2Q05952 138 aa7.5□□□□□ -1.21
TRAF3IP2-208ENST00000392556 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.5□□□□□ -1.21
TRAF3IP2-208ENST00000392556 Q6ZQY7 126 aa7.5□□□□□ -1.21
TRAF3IP2-208ENST00000392556 DYNC1H1Q14204 4646 aaKnown RBP7.49□□□□□ -1.21
TRAF3IP2-208ENST00000392556 A6NN06 94 aa7.49□□□□□ -1.21
TRAF3IP2-208ENST00000392556 A8MU10 97 aa7.47□□□□□ -1.21
TRAF3IP2-208ENST00000392556 ZNF73O43830 326 aaPredicted RBP7.47□□□□□ -1.21
TRAF3IP2-208ENST00000392556 LIMD2Q9BT23 127 aa7.47□□□□□ -1.21
TRAF3IP2-208ENST00000392556 Q8N9L7 120 aa7.47□□□□□ -1.21
TRAF3IP2-208ENST00000392556 IGLV4-60A0A075B6I1 120 aa7.46□□□□□ -1.21
TRAF3IP2-208ENST00000392556 TRGV2A0A075B6R0 118 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms