RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 FREM1Q5H8C1 2179 aa1.31□□□□□ -2.2
PTPRC-205ENST00000391970 UTRNP46939 3433 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 LRRK2Q5S007 2527 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 DEFB131BA0A096LNP1 70 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 LINC00959A0A1B0GUT2 108 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 M0QY20 66 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 RNASE3P12724 160 aaKnown RBP1.3□□□□□ -2.2
PTPRC-205ENST00000391970 SPINK7P58062 85 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 RPL39P62891 51 aaKnown RBP1.3□□□□□ -2.2
PTPRC-205ENST00000391970 CSAG1Q6PB30 78 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 LINC00575Q6W349 94 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 Q6ZQY7 126 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 DEFB132Q7Z7B7 95 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 COA5Q86WW8 74 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 DMAC1Q96GE9 116 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 MED13Q9UHV7 2174 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 TNCP24821 2201 aa1.3□□□□□ -2.2
PTPRC-205ENST00000391970 IGLV5-48A0A075B6I7 105 aa1.29□□□□□ -2.2
PTPRC-205ENST00000391970 IGKV2-40A0A087WW87 121 aaPredicted RBP1.29□□□□□ -2.2
PTPRC-205ENST00000391970 TRGV4A0A0C4DH28 118 aa1.29□□□□□ -2.2
PTPRC-205ENST00000391970 H0YGG7 62 aa1.29□□□□□ -2.2
PTPRC-205ENST00000391970 K7EIM0 57 aa1.29□□□□□ -2.2
PTPRC-205ENST00000391970 M0R2N4 97 aa1.29□□□□□ -2.2
PTPRC-205ENST00000391970 UQCR11O14957 56 aa1.29□□□□□ -2.2
PTPRC-205ENST00000391970 IGKV2D-40P01614 121 aaPredicted RBP1.29□□□□□ -2.2
PTPRC-205ENST00000391970 MGPP08493 103 aa1.29□□□□□ -2.2
PTPRC-205ENST00000391970 KRTAP12-4P60329 112 aa1.29□□□□□ -2.2
PTPRC-205ENST00000391970 MIR22HGQ0VDD5 57 aa1.29□□□□□ -2.2
PTPRC-205ENST00000391970 WFDC10AQ9H1F0 79 aa1.29□□□□□ -2.2
PTPRC-205ENST00000391970 ZGRF1Q86YA3 2104 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 WDFY4Q6ZS81 3184 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 ZFHX4Q86UP3 3567 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 NUPR2A6NF83 97 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 CCL3L1P16619 93 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 HAMPP81172 84 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 SPAG11BQ08648 103 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 COX17Q14061 63 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 RPL39P5Q59GN2 51 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 SPAG11AQ6PDA7 123 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 Q8TAT8 98 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 CDKN2A-AS1Q9UH64 79 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 BRWD1Q9NSI6 2320 aa1.28□□□□□ -2.2
PTPRC-205ENST00000391970 SPTBN5Q9NRC6 3674 aaKnown RBP1.27□□□□□ -2.21
PTPRC-205ENST00000391970 F5P12259 2224 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 IGKV3-7A0A075B6H7 116 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 LYNX1G3V0Z9 82 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 MRPL33O75394 65 aaKnown RBP1.27□□□□□ -2.21
PTPRC-205ENST00000391970 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 FDCSPQ8NFU4 85 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 GAFA1Q96PS6 74 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 LINC00472Q9H8W2 130 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 CRCT1Q9UGL9 99 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 RANBP2P49792 3224 aaKnown RBP1.27□□□□□ -2.21
PTPRC-205ENST00000391970 KALRNO60229 2985 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 NBEAQ8NFP9 2946 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 NBEAL2Q6ZNJ1 2754 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 ZNF292O60281 2723 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 C2CD3Q4AC94 2353 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 DIDO1Q9BTC0 2240 aaKnown RBP1.27□□□□□ -2.21
PTPRC-205ENST00000391970 SZT2Q5T011 3432 aa1.27□□□□□ -2.21
PTPRC-205ENST00000391970 RYR1P21817 5038 aa1.26□□□□□ -2.21
PTPRC-205ENST00000391970 KIAA0100Q14667 2235 aaKnown RBP1.26□□□□□ -2.21
PTPRC-205ENST00000391970 RP1P56715 2156 aa1.26□□□□□ -2.21
PTPRC-205ENST00000391970 A0A087WTM6 91 aa1.26□□□□□ -2.21
PTPRC-205ENST00000391970 IGKV3OR2-268A0A0C4DH90 116 aa1.26□□□□□ -2.21
PTPRC-205ENST00000391970 A8MTW9 85 aa1.26□□□□□ -2.21
PTPRC-205ENST00000391970 LINC00158P58513 81 aa1.26□□□□□ -2.21
PTPRC-205ENST00000391970 KRTAP5-7Q6L8G8 165 aa1.26□□□□□ -2.21
PTPRC-205ENST00000391970 Q8IZM0 81 aa1.26□□□□□ -2.21
PTPRC-205ENST00000391970 PTPRQQ9UMZ3 2332 aa1.26□□□□□ -2.21
PTPRC-205ENST00000391970 VPS13AQ96RL7 3174 aa1.25□□□□□ -2.21
PTPRC-205ENST00000391970 IGHV3-64A0A075B6Q5 118 aa1.25□□□□□ -2.21
PTPRC-205ENST00000391970 KRTAP12-1P59990 96 aa1.25□□□□□ -2.21
PTPRC-205ENST00000391970 KAAG1Q9UBP8 84 aa1.25□□□□□ -2.21
PTPRC-205ENST00000391970 UNC80Q8N2C7 3258 aa1.25□□□□□ -2.21
PTPRC-205ENST00000391970 DNAJC13O75165 2243 aa1.25□□□□□ -2.21
PTPRC-205ENST00000391970 DOCK10Q96BY6 2186 aa1.25□□□□□ -2.21
PTPRC-205ENST00000391970 LAMA2P24043 3122 aaKnown RBP1.24□□□□□ -2.21
PTPRC-205ENST00000391970 PRRC2BQ5JSZ5 2229 aaKnown RBP1.24□□□□□ -2.21
PTPRC-205ENST00000391970 MYO9AB2RTY4 2548 aa1.24□□□□□ -2.21
PTPRC-205ENST00000391970 WDR87Q6ZQQ6 2873 aa1.24□□□□□ -2.21
PTPRC-205ENST00000391970 KRTAP5-8O75690 187 aa1.24□□□□□ -2.21
PTPRC-205ENST00000391970 LY6G6CO95867 125 aa1.24□□□□□ -2.21
PTPRC-205ENST00000391970 STATHP02808 62 aa1.24□□□□□ -2.21
PTPRC-205ENST00000391970 DEFB103AP81534 67 aa1.24□□□□□ -2.21
PTPRC-205ENST00000391970 DEFB113Q30KQ7 82 aa1.24□□□□□ -2.21
PTPRC-205ENST00000391970 DEFB112Q30KQ8 113 aa1.24□□□□□ -2.21
PTPRC-205ENST00000391970 C10orf55Q5SWW7 151 aa1.24□□□□□ -2.21
PTPRC-205ENST00000391970 Q9Y3F1 56 aa1.24□□□□□ -2.21
PTPRC-205ENST00000391970 IGSF10Q6WRI0 2623 aa1.24□□□□□ -2.21
PTPRC-205ENST00000391970 MGAQ8IWI9 3026 aa1.23□□□□□ -2.21
PTPRC-205ENST00000391970 ICE1Q9Y2F5 2266 aa1.23□□□□□ -2.21
PTPRC-205ENST00000391970 XIRP2A4UGR9 3374 aa1.23□□□□□ -2.21
PTPRC-205ENST00000391970 GVQW2A0A096LPI5 108 aaPredicted RBP1.23□□□□□ -2.21
PTPRC-205ENST00000391970 K7EQZ3 153 aa1.23□□□□□ -2.21
PTPRC-205ENST00000391970 ANGP03950 147 aaKnown RBP1.23□□□□□ -2.21
PTPRC-205ENST00000391970 PRB4P10163 310 aaPredicted RBP1.23□□□□□ -2.21
PTPRC-205ENST00000391970 COX6A2Q02221 97 aa1.23□□□□□ -2.21
PTPRC-205ENST00000391970 PCOTHQ58A44 107 aa1.23□□□□□ -2.21
PTPRC-205ENST00000391970 PATE1Q8WXA2 126 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 551.3 ms