RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 CASC2Q6XLA1 102 aa9.74□□□□□ -0.85
ZNF541-203ENST00000391901 LIMD2Q9BT23 127 aa9.74□□□□□ -0.85
ZNF541-203ENST00000391901 ADGRG4Q8IZF6 3080 aa9.74□□□□□ -0.85
ZNF541-203ENST00000391901 H7BZZ5 65 aa9.73□□□□□ -0.85
ZNF541-203ENST00000391901 Q6ZQT0 140 aa9.73□□□□□ -0.85
ZNF541-203ENST00000391901 KRTAP10-11P60412 298 aa9.73□□□□□ -0.85
ZNF541-203ENST00000391901 GCN1Q92616 2671 aaKnown RBP9.73□□□□□ -0.85
ZNF541-203ENST00000391901 ELOF1P60002 83 aaKnown RBP9.72□□□□□ -0.85
ZNF541-203ENST00000391901 UBR5O95071 2799 aaPredicted RBP9.72□□□□□ -0.85
ZNF541-203ENST00000391901 KLKP1Q107X0 134 aa9.71□□□□□ -0.85
ZNF541-203ENST00000391901 Q6ZRP5 223 aa9.71□□□□□ -0.85
ZNF541-203ENST00000391901 SERTAD4-AS1Q5TG53 156 aa9.71□□□□□ -0.86
ZNF541-203ENST00000391901 SPEGQ15772 3267 aa9.71□□□□□ -0.86
ZNF541-203ENST00000391901 IGHV6-1A0A0B4J1U7 121 aa9.7□□□□□ -0.86
ZNF541-203ENST00000391901 LOC110117498A0A087WWA1 95 aa9.7□□□□□ -0.86
ZNF541-203ENST00000391901 GVQW2A0A096LPI5 108 aaPredicted RBP9.69□□□□□ -0.86
ZNF541-203ENST00000391901 DNAH10OSP0CZ25 163 aa9.68□□□□□ -0.86
ZNF541-203ENST00000391901 LINC00612Q8N6U2 182 aa9.68□□□□□ -0.86
ZNF541-203ENST00000391901 COL12A1Q99715 3063 aa9.68□□□□□ -0.86
ZNF541-203ENST00000391901 DMXL2Q8TDJ6 3036 aa9.68□□□□□ -0.86
ZNF541-203ENST00000391901 VPREB1P12018 145 aa9.68□□□□□ -0.86
ZNF541-203ENST00000391901 SMIM29Q86T20 159 aa9.68□□□□□ -0.86
ZNF541-203ENST00000391901 TACC2O95359 2948 aa9.67□□□□□ -0.86
ZNF541-203ENST00000391901 PHF5AQ7RTV0 110 aaKnown RBP9.67□□□□□ -0.86
ZNF541-203ENST00000391901 A8MUN3 132 aa9.66□□□□□ -0.86
ZNF541-203ENST00000391901 KALRNO60229 2985 aa9.66□□□□□ -0.86
ZNF541-203ENST00000391901 Q6ZRX8 168 aa9.66□□□□□ -0.86
ZNF541-203ENST00000391901 K7EIL1 84 aa9.66□□□□□ -0.86
ZNF541-203ENST00000391901 CHTF8P0CG12 524 aa9.66□□□□□ -0.86
ZNF541-203ENST00000391901 PRR34Q9NV39 138 aa9.66□□□□□ -0.86
ZNF541-203ENST00000391901 HCG22E2RYF7 251 aa9.66□□□□□ -0.86
ZNF541-203ENST00000391901 NBDYA0A0U1RRE5 68 aa9.65□□□□□ -0.86
ZNF541-203ENST00000391901 ST20-AS1Q8NBB2 130 aa9.65□□□□□ -0.86
ZNF541-203ENST00000391901 Q5XG85 94 aa9.65□□□□□ -0.86
ZNF541-203ENST00000391901 IGLV6-57P01721 117 aa9.65□□□□□ -0.87
ZNF541-203ENST00000391901 hDV103S1A0JD37 113 aa9.64□□□□□ -0.87
ZNF541-203ENST00000391901 FAM168BA1KXE4 195 aa9.63□□□□□ -0.87
ZNF541-203ENST00000391901 NBEAL2Q6ZNJ1 2754 aa9.63□□□□□ -0.87
ZNF541-203ENST00000391901 EYSQ5T1H1 3165 aa9.63□□□□□ -0.87
ZNF541-203ENST00000391901 PCOTHQ58A44 107 aa9.62□□□□□ -0.87
ZNF541-203ENST00000391901 H0Y9P7 68 aa9.61□□□□□ -0.87
ZNF541-203ENST00000391901 C16orf90A8MZG2 172 aa9.61□□□□□ -0.87
ZNF541-203ENST00000391901 Q8NBF4 154 aa9.59□□□□□ -0.87
ZNF541-203ENST00000391901 LINC00476Q8WZB0 136 aa9.59□□□□□ -0.87
ZNF541-203ENST00000391901 A0A1B0GW54 56 aa9.58□□□□□ -0.88
ZNF541-203ENST00000391901 EPM2AB3EWF7 344 aa9.58□□□□□ -0.88
ZNF541-203ENST00000391901 C15orf56Q8N910 161 aa9.58□□□□□ -0.88
ZNF541-203ENST00000391901 ZZEF1O43149 2961 aa9.58□□□□□ -0.88
ZNF541-203ENST00000391901 LINC01600Q96MT4 127 aa9.58□□□□□ -0.88
ZNF541-203ENST00000391901 NBEAL1Q6ZS30 2694 aa9.58□□□□□ -0.88
ZNF541-203ENST00000391901 MOBPQ13875 183 aa9.58□□□□□ -0.88
ZNF541-203ENST00000391901 CYSTM1Q9H1C7 97 aa9.58□□□□□ -0.88
ZNF541-203ENST00000391901 REV3LO60673 3130 aa9.57□□□□□ -0.88
ZNF541-203ENST00000391901 ERC2-IT1O76042 136 aa9.57□□□□□ -0.88
ZNF541-203ENST00000391901 RETNLBQ9BQ08 111 aa9.57□□□□□ -0.88
ZNF541-203ENST00000391901 C9orf129Q5T035 196 aaKnown RBP9.56□□□□□ -0.88
ZNF541-203ENST00000391901 CR1P17927 2039 aa9.56□□□□□ -0.88
ZNF541-203ENST00000391901 KTN1-AS1Q86SY8 53 aa9.56□□□□□ -0.88
ZNF541-203ENST00000391901 RTL8CO15255 209 aa9.55□□□□□ -0.88
ZNF541-203ENST00000391901 ITPR1Q14643 2758 aa9.55□□□□□ -0.88
ZNF541-203ENST00000391901 CFAP47Q6ZTR5 3102 aa9.54□□□□□ -0.88
ZNF541-203ENST00000391901 FAM104AQ969W3 186 aa9.54□□□□□ -0.88
ZNF541-203ENST00000391901 TRAV22A0A0B4J277 110 aa9.54□□□□□ -0.88
ZNF541-203ENST00000391901 LINC00528Q8N1L1 170 aa9.54□□□□□ -0.88
ZNF541-203ENST00000391901 C1orf64Q8NEQ6 169 aa9.54□□□□□ -0.88
ZNF541-203ENST00000391901 SPAG11AQ6PDA7 123 aa9.52□□□□□ -0.88
ZNF541-203ENST00000391901 KCNQ1DNQ9H478 68 aa9.52□□□□□ -0.89
ZNF541-203ENST00000391901 K7ERS5 55 aa9.52□□□□□ -0.89
ZNF541-203ENST00000391901 PRR15Q8IV56 129 aa9.51□□□□□ -0.89
ZNF541-203ENST00000391901 IGLV1-50A0A075B6I6 118 aa9.51□□□□□ -0.89
ZNF541-203ENST00000391901 LRBAP50851 2863 aa9.5□□□□□ -0.89
ZNF541-203ENST00000391901 SPTBN5Q9NRC6 3674 aaKnown RBP9.5□□□□□ -0.89
ZNF541-203ENST00000391901 OXTP01178 125 aa9.48□□□□□ -0.89
ZNF541-203ENST00000391901 CASC10Q5T4H9 136 aa9.48□□□□□ -0.89
ZNF541-203ENST00000391901 ATP11AUNQ6ZP68 121 aa9.48□□□□□ -0.89
ZNF541-203ENST00000391901 CYP4F30PQ9H0H9 118 aa9.48□□□□□ -0.89
ZNF541-203ENST00000391901 FP248Q71RG6 208 aaPredicted RBP9.47□□□□□ -0.89
ZNF541-203ENST00000391901 SPACA4Q8TDM5 124 aa9.46□□□□□ -0.89
ZNF541-203ENST00000391901 RPL37AP61513 92 aaKnown RBP9.46□□□□□ -0.89
ZNF541-203ENST00000391901 NSD1Q96L73 2696 aaPredicted RBP9.46□□□□□ -0.9
ZNF541-203ENST00000391901 TRBV7-4A0A0J9YYF1 115 aa9.45□□□□□ -0.9
ZNF541-203ENST00000391901 C7orf65Q6ZTY9 151 aa9.44□□□□□ -0.9
ZNF541-203ENST00000391901 C8orf87E5RJ46 101 aa9.44□□□□□ -0.9
ZNF541-203ENST00000391901 DMXL1Q9Y485 3027 aa9.43□□□□□ -0.9
ZNF541-203ENST00000391901 ITPR2Q14571 2701 aa9.43□□□□□ -0.9
ZNF541-203ENST00000391901 LCA10Q71F78 164 aa9.43□□□□□ -0.9
ZNF541-203ENST00000391901 Q8N377 158 aa9.43□□□□□ -0.9
ZNF541-203ENST00000391901 OBSCN-AS1Q96MR7 158 aa9.42□□□□□ -0.9
ZNF541-203ENST00000391901 WWC2-AS2Q96NR7 200 aa9.42□□□□□ -0.9
ZNF541-203ENST00000391901 RBM12B-AS1Q9P1G2 102 aa9.41□□□□□ -0.9
ZNF541-203ENST00000391901 BAHCC1Q9P281 2608 aa9.41□□□□□ -0.9
ZNF541-203ENST00000391901 A0A0G2JQZ4 141 aa9.41□□□□□ -0.9
ZNF541-203ENST00000391901 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
ZNF541-203ENST00000391901 IGKV2D-30A0A075B6S6 120 aa9.39□□□□□ -0.91
ZNF541-203ENST00000391901 K7EQZ3 153 aa9.39□□□□□ -0.91
ZNF541-203ENST00000391901 IGKV2-30P06310 120 aa9.39□□□□□ -0.91
ZNF541-203ENST00000391901 C9orf163Q8N9P6 203 aa9.39□□□□□ -0.91
ZNF541-203ENST00000391901 SPINK1P00995 79 aa9.39□□□□□ -0.91
ZNF541-203ENST00000391901 TLX1NBP0CAT3 122 aa9.39□□□□□ -0.91
ZNF541-203ENST00000391901 LOC400499M0QZD8 3231 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms