RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 TMEM254Q8TBM7 123 aa3.41□□□□□ -1.86
LTN1-202ENST00000389194 CELSR2Q9HCU4 2923 aa3.41□□□□□ -1.86
LTN1-202ENST00000389194 PHF5AQ7RTV0 110 aaKnown RBP3.41□□□□□ -1.86
LTN1-202ENST00000389194 LITAFQ99732 161 aa3.4□□□□□ -1.86
LTN1-202ENST00000389194 TRBV7-6A0A0J9YX20 115 aa3.4□□□□□ -1.86
LTN1-202ENST00000389194 TRBV7-7A0A0K0K1E9 115 aa3.4□□□□□ -1.87
LTN1-202ENST00000389194 H0Y9P7 68 aa3.4□□□□□ -1.87
LTN1-202ENST00000389194 MUC3AQ02505 3323 aa3.4□□□□□ -1.87
LTN1-202ENST00000389194 TM2D3Q9BRN9 247 aa3.4□□□□□ -1.87
LTN1-202ENST00000389194 HCG22E2RYF7 251 aa3.4□□□□□ -1.87
LTN1-202ENST00000389194 PMAIP1Q13794 54 aa3.39□□□□□ -1.87
LTN1-202ENST00000389194 C9orf129Q5T035 196 aaKnown RBP3.39□□□□□ -1.87
LTN1-202ENST00000389194 NHLRC4P0CG21 123 aaPredicted RBP3.39□□□□□ -1.87
LTN1-202ENST00000389194 SMIM26A0A096LP01 95 aa3.39□□□□□ -1.87
LTN1-202ENST00000389194 KRTAP24-1Q3LI83 254 aa3.39□□□□□ -1.87
LTN1-202ENST00000389194 DMDP11532 3685 aa3.39□□□□□ -1.87
LTN1-202ENST00000389194 NDUFC1O43677 76 aa3.39□□□□□ -1.87
LTN1-202ENST00000389194 C1orf195Q5TG92 126 aa3.39□□□□□ -1.87
LTN1-202ENST00000389194 IL17DQ8TAD2 202 aa3.39□□□□□ -1.87
LTN1-202ENST00000389194 Q6ZRP5 223 aa3.38□□□□□ -1.87
LTN1-202ENST00000389194 IGSF10Q6WRI0 2623 aa3.38□□□□□ -1.87
LTN1-202ENST00000389194 NSD1Q96L73 2696 aaPredicted RBP3.38□□□□□ -1.87
LTN1-202ENST00000389194 MOBPQ13875 183 aa3.38□□□□□ -1.87
LTN1-202ENST00000389194 HIVEP1P15822 2718 aa3.38□□□□□ -1.87
LTN1-202ENST00000389194 IGKV2D-30A0A075B6S6 120 aa3.38□□□□□ -1.87
LTN1-202ENST00000389194 IGKV2-30P06310 120 aa3.38□□□□□ -1.87
LTN1-202ENST00000389194 FSHBP01225 129 aa3.38□□□□□ -1.87
LTN1-202ENST00000389194 SERP1Q9Y6X1 66 aa3.38□□□□□ -1.87
LTN1-202ENST00000389194 V9GYY9 64 aa3.38□□□□□ -1.87
LTN1-202ENST00000389194 IGLV8-61A0A075B6I0 122 aa3.38□□□□□ -1.87
LTN1-202ENST00000389194 IGLV5-45A0A087WSX0 123 aa3.38□□□□□ -1.87
LTN1-202ENST00000389194 MDFIQ99750 246 aa3.38□□□□□ -1.87
LTN1-202ENST00000389194 Q8NAQ8 132 aa3.37□□□□□ -1.87
LTN1-202ENST00000389194 SPACA4Q8TDM5 124 aa3.37□□□□□ -1.87
LTN1-202ENST00000389194 ZANQ9Y493 2812 aa3.37□□□□□ -1.87
LTN1-202ENST00000389194 SERTAD4-AS1Q5TG53 156 aa3.37□□□□□ -1.87
LTN1-202ENST00000389194 C2orf48Q96LS8 159 aa3.37□□□□□ -1.87
LTN1-202ENST00000389194 FLG2Q5D862 2391 aaPredicted RBP3.37□□□□□ -1.87
LTN1-202ENST00000389194 CSMD1Q96PZ7 3565 aa3.36□□□□□ -1.87
LTN1-202ENST00000389194 LINC00588Q9Y4M8 146 aa3.36□□□□□ -1.87
LTN1-202ENST00000389194 NUPR2A6NF83 97 aa3.36□□□□□ -1.87
LTN1-202ENST00000389194 KRTAP10-3P60369 221 aa3.36□□□□□ -1.87
LTN1-202ENST00000389194 Q6ZQT0 140 aa3.36□□□□□ -1.87
LTN1-202ENST00000389194 C1orf64Q8NEQ6 169 aa3.36□□□□□ -1.87
LTN1-202ENST00000389194 DNAH10OSP0CZ25 163 aa3.36□□□□□ -1.87
LTN1-202ENST00000389194 GIG44P09565 113 aaPredicted RBP3.36□□□□□ -1.87
LTN1-202ENST00000389194 LINC00476Q8WZB0 136 aa3.36□□□□□ -1.87
LTN1-202ENST00000389194 ZNF706Q9Y5V0 76 aaPredicted RBP3.36□□□□□ -1.87
LTN1-202ENST00000389194 ANAPC11Q9NYG5 84 aa3.35□□□□□ -1.87
LTN1-202ENST00000389194 SPAG11AQ6PDA7 123 aa3.35□□□□□ -1.87
LTN1-202ENST00000389194 LINC00474Q9P2X8 69 aa3.35□□□□□ -1.87
LTN1-202ENST00000389194 C1orf134Q5TEV5 83 aa3.35□□□□□ -1.87
LTN1-202ENST00000389194 STAB2Q8WWQ8 2551 aa3.35□□□□□ -1.87
LTN1-202ENST00000389194 ZNF575Q86XF7 245 aa3.35□□□□□ -1.87
LTN1-202ENST00000389194 DCHS2Q6V1P9 2916 aa3.34□□□□□ -1.87
LTN1-202ENST00000389194 EPM2AB3EWF7 344 aa3.34□□□□□ -1.87
LTN1-202ENST00000389194 LINC01561Q8N1V8 128 aa3.34□□□□□ -1.87
LTN1-202ENST00000389194 CSNK1G2-AS1Q8NCQ2 148 aa3.34□□□□□ -1.87
LTN1-202ENST00000389194 ELOF1P60002 83 aaKnown RBP3.34□□□□□ -1.87
LTN1-202ENST00000389194 ATP5EP56381 51 aaPredicted RBP3.34□□□□□ -1.87
LTN1-202ENST00000389194 KRTAP10-11P60412 298 aa3.34□□□□□ -1.87
LTN1-202ENST00000389194 FBN2P35556 2912 aa3.34□□□□□ -1.88
LTN1-202ENST00000389194 CASC10Q5T4H9 136 aa3.34□□□□□ -1.88
LTN1-202ENST00000389194 K7EQZ3 153 aa3.33□□□□□ -1.88
LTN1-202ENST00000389194 CXCL6P80162 114 aa3.33□□□□□ -1.88
LTN1-202ENST00000389194 Q6ZRX8 168 aa3.33□□□□□ -1.88
LTN1-202ENST00000389194 APCP25054 2843 aa3.32□□□□□ -1.88
LTN1-202ENST00000389194 ITPR2Q14571 2701 aa3.32□□□□□ -1.88
LTN1-202ENST00000389194 VPREB1P12018 145 aa3.32□□□□□ -1.88
LTN1-202ENST00000389194 NF1P21359 2839 aa3.32□□□□□ -1.88
LTN1-202ENST00000389194 hDV103S1A0JD37 113 aa3.32□□□□□ -1.88
LTN1-202ENST00000389194 TRBV7-4A0A0J9YYF1 115 aa3.31□□□□□ -1.88
LTN1-202ENST00000389194 A0A096LNT2 108 aa3.31□□□□□ -1.88
LTN1-202ENST00000389194 C19orf73Q9NVV2 129 aa3.31□□□□□ -1.88
LTN1-202ENST00000389194 Q8NBF4 154 aa3.3□□□□□ -1.88
LTN1-202ENST00000389194 SVEP1Q4LDE5 3571 aa3.3□□□□□ -1.88
LTN1-202ENST00000389194 IGLV6-57P01721 117 aa3.3□□□□□ -1.88
LTN1-202ENST00000389194 K7ERS5 55 aa3.3□□□□□ -1.88
LTN1-202ENST00000389194 SMG1Q96Q15 3661 aaKnown RBP3.3□□□□□ -1.88
LTN1-202ENST00000389194 RTL8CO15255 209 aa3.3□□□□□ -1.88
LTN1-202ENST00000389194 C15orf56Q8N910 161 aa3.3□□□□□ -1.88
LTN1-202ENST00000389194 ERC2-IT1O76042 136 aa3.29□□□□□ -1.88
LTN1-202ENST00000389194 C7orf65Q6ZTY9 151 aa3.29□□□□□ -1.88
LTN1-202ENST00000389194 KMT2BQ9UMN6 2715 aaPredicted RBP3.29□□□□□ -1.88
LTN1-202ENST00000389194 NIPBLQ6KC79 2804 aaeCLIP3.28□□□□□ -1.88
LTN1-202ENST00000389194 NBDYA0A0U1RRE5 68 aa3.28□□□□□ -1.88
LTN1-202ENST00000389194 K7EIL1 84 aa3.28□□□□□ -1.88
LTN1-202ENST00000389194 Q8N377 158 aa3.28□□□□□ -1.88
LTN1-202ENST00000389194 DMBT1Q9UGM3 2413 aaPredicted RBP3.28□□□□□ -1.88
LTN1-202ENST00000389194 A8MUN3 132 aa3.28□□□□□ -1.88
LTN1-202ENST00000389194 SMR3BP02814 79 aaPredicted RBP3.28□□□□□ -1.88
LTN1-202ENST00000389194 LOC110117498A0A087WWA1 95 aa3.28□□□□□ -1.88
LTN1-202ENST00000389194 GVQW2A0A096LPI5 108 aaPredicted RBP3.27□□□□□ -1.89
LTN1-202ENST00000389194 C16orf90A8MZG2 172 aa3.27□□□□□ -1.89
LTN1-202ENST00000389194 KLK9Q2XQG4 91 aa3.27□□□□□ -1.89
LTN1-202ENST00000389194 IGFL1Q6UW32 110 aa3.27□□□□□ -1.89
LTN1-202ENST00000389194 CELSR1Q9NYQ6 3014 aa3.27□□□□□ -1.89
LTN1-202ENST00000389194 KRTAP1-3Q8IUG1 177 aa3.27□□□□□ -1.89
LTN1-202ENST00000389194 LINC00528Q8N1L1 170 aa3.27□□□□□ -1.89
LTN1-202ENST00000389194 IGLV1-50A0A075B6I6 118 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms