RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 WIPF1O43516 503 aa3.89□□□□□ -1.79
RFX3-204ENST00000382004 KRTAP24-1Q3LI83 254 aa3.89□□□□□ -1.79
RFX3-204ENST00000382004 PKD1L2Q7Z442 2459 aa3.88□□□□□ -1.79
RFX3-204ENST00000382004 ZNF861PO60384 105 aa3.88□□□□□ -1.79
RFX3-204ENST00000382004 SETD2Q9BYW2 2564 aaPredicted RBP3.88□□□□□ -1.79
RFX3-204ENST00000382004 MUC22E2RYF6 1773 aaPredicted RBP3.88□□□□□ -1.79
RFX3-204ENST00000382004 KCNQ1DNQ9H478 68 aa3.88□□□□□ -1.79
RFX3-204ENST00000382004 Q1T7F1 81 aa3.87□□□□□ -1.79
RFX3-204ENST00000382004 Q8N377 158 aa3.87□□□□□ -1.79
RFX3-204ENST00000382004 C15orf56Q8N910 161 aa3.87□□□□□ -1.79
RFX3-204ENST00000382004 CR1P17927 2039 aa3.86□□□□□ -1.79
RFX3-204ENST00000382004 KLKP1Q107X0 134 aa3.86□□□□□ -1.79
RFX3-204ENST00000382004 LINC00528Q8N1L1 170 aa3.86□□□□□ -1.79
RFX3-204ENST00000382004 M0R2T5 61 aa3.86□□□□□ -1.79
RFX3-204ENST00000382004 LITAFQ99732 161 aa3.86□□□□□ -1.79
RFX3-204ENST00000382004 WDR87Q6ZQQ6 2873 aa3.85□□□□□ -1.79
RFX3-204ENST00000382004 H7BZZ5 65 aa3.85□□□□□ -1.79
RFX3-204ENST00000382004 NCOR2Q9Y618 2525 aa3.84□□□□□ -1.79
RFX3-204ENST00000382004 FLG2Q5D862 2391 aaPredicted RBP3.83□□□□□ -1.8
RFX3-204ENST00000382004 PCSK5Q92824 1860 aa3.83□□□□□ -1.8
RFX3-204ENST00000382004 USP9XQ93008 2570 aaPredicted RBP3.83□□□□□ -1.8
RFX3-204ENST00000382004 C9orf163Q8N9P6 203 aa3.83□□□□□ -1.8
RFX3-204ENST00000382004 IGLV7-43P04211 117 aa3.83□□□□□ -1.8
RFX3-204ENST00000382004 Q6ZSA8 131 aa3.82□□□□□ -1.8
RFX3-204ENST00000382004 A0A087WTM6 91 aa3.82□□□□□ -1.8
RFX3-204ENST00000382004 TLX1NBP0CAT3 122 aa3.82□□□□□ -1.8
RFX3-204ENST00000382004 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
RFX3-204ENST00000382004 PSORS1C2Q9UIG4 136 aa3.81□□□□□ -1.8
RFX3-204ENST00000382004 PRR26Q8N8Z3 221 aa3.81□□□□□ -1.8
RFX3-204ENST00000382004 EIF4EBP3O60516 100 aaPredicted RBP3.81□□□□□ -1.8
RFX3-204ENST00000382004 A0A1B0GU33 70 aa3.81□□□□□ -1.8
RFX3-204ENST00000382004 SPANXA2-OT1Q8N9U9 137 aa3.81□□□□□ -1.8
RFX3-204ENST00000382004 H3BS24 57 aa3.81□□□□□ -1.8
RFX3-204ENST00000382004 ANKRD17O75179 2603 aaKnown RBP3.8□□□□□ -1.8
RFX3-204ENST00000382004 PLA2G2DQ9UNK4 145 aa3.8□□□□□ -1.8
RFX3-204ENST00000382004 SPRR4Q96PI1 79 aa3.79□□□□□ -1.8
RFX3-204ENST00000382004 KRTAP10-11P60412 298 aa3.79□□□□□ -1.8
RFX3-204ENST00000382004 PIEZO1Q92508 2521 aa3.79□□□□□ -1.8
RFX3-204ENST00000382004 K7EIL1 84 aa3.79□□□□□ -1.8
RFX3-204ENST00000382004 A0A1W2PNM2 257 aa3.77□□□□□ -1.81
RFX3-204ENST00000382004 PRR34Q9NV39 138 aa3.76□□□□□ -1.81
RFX3-204ENST00000382004 IGLV7-46A0A075B6I9 117 aa3.76□□□□□ -1.81
RFX3-204ENST00000382004 SPINK7P58062 85 aa3.76□□□□□ -1.81
RFX3-204ENST00000382004 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
RFX3-204ENST00000382004 SRCAPQ6ZRS2 3230 aa3.76□□□□□ -1.81
RFX3-204ENST00000382004 CASC10Q5T4H9 136 aa3.76□□□□□ -1.81
RFX3-204ENST00000382004 COL4A2P08572 1712 aa3.75□□□□□ -1.81
RFX3-204ENST00000382004 SPTBN4Q9H254 2564 aa3.75□□□□□ -1.81
RFX3-204ENST00000382004 LINC00612Q8N6U2 182 aa3.75□□□□□ -1.81
RFX3-204ENST00000382004 S4R3F8 94 aa3.75□□□□□ -1.81
RFX3-204ENST00000382004 HRES1P13985 223 aa3.75□□□□□ -1.81
RFX3-204ENST00000382004 MTORP42345 2549 aa3.74□□□□□ -1.81
RFX3-204ENST00000382004 CSAG1Q6PB30 78 aa3.74□□□□□ -1.81
RFX3-204ENST00000382004 USP9YO00507 2555 aaPredicted RBP3.73□□□□□ -1.81
RFX3-204ENST00000382004 DMAC1Q96GE9 116 aa3.73□□□□□ -1.81
RFX3-204ENST00000382004 USP24Q9UPU5 2620 aa3.73□□□□□ -1.81
RFX3-204ENST00000382004 CHD8Q9HCK8 2581 aa3.73□□□□□ -1.81
RFX3-204ENST00000382004 C19orf73Q9NVV2 129 aa3.72□□□□□ -1.81
RFX3-204ENST00000382004 Q75L30 129 aa3.72□□□□□ -1.81
RFX3-204ENST00000382004 GIG44P09565 113 aaPredicted RBP3.71□□□□□ -1.82
RFX3-204ENST00000382004 OCR1Q9BZK8 76 aa3.71□□□□□ -1.82
RFX3-204ENST00000382004 POLQO75417 2590 aa3.71□□□□□ -1.82
RFX3-204ENST00000382004 BPTFQ12830 3046 aa3.71□□□□□ -1.82
RFX3-204ENST00000382004 R4GN34 69 aa3.71□□□□□ -1.82
RFX3-204ENST00000382004 CNBPP62633 177 aaKnown RBP3.7□□□□□ -1.82
RFX3-204ENST00000382004 H1FX-AS1Q4G0G2 97 aa3.7□□□□□ -1.82
RFX3-204ENST00000382004 FAM229BQ4G0N7 80 aa3.7□□□□□ -1.82
RFX3-204ENST00000382004 C10orf142B7Z368 130 aa3.69□□□□□ -1.82
RFX3-204ENST00000382004 ANKRD11Q6UB99 2663 aaPredicted RBP3.69□□□□□ -1.82
RFX3-204ENST00000382004 KRTAP10-3P60369 221 aa3.69□□□□□ -1.82
RFX3-204ENST00000382004 TNP2Q05952 138 aa3.68□□□□□ -1.82
RFX3-204ENST00000382004 Q8N9P0 234 aaPredicted RBP3.68□□□□□ -1.82
RFX3-204ENST00000382004 ZCCHC13Q8WW36 166 aaKnown RBP3.68□□□□□ -1.82
RFX3-204ENST00000382004 LINC01558Q9Y6Z2 57 aa3.66□□□□□ -1.82
RFX3-204ENST00000382004 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.66□□□□□ -1.82
RFX3-204ENST00000382004 ROMO1P60602 79 aa3.65□□□□□ -1.83
RFX3-204ENST00000382004 PLAC4Q8WY50 150 aa3.64□□□□□ -1.83
RFX3-204ENST00000382004 KLK9Q2XQG4 91 aa3.64□□□□□ -1.83
RFX3-204ENST00000382004 FASNP49327 2511 aaKnown RBP3.63□□□□□ -1.83
RFX3-204ENST00000382004 M0QZ58 72 aa3.63□□□□□ -1.83
RFX3-204ENST00000382004 Q5W150 140 aa3.63□□□□□ -1.83
RFX3-204ENST00000382004 CENPFP49454 3210 aa3.63□□□□□ -1.83
RFX3-204ENST00000382004 Q5VV11 94 aa3.63□□□□□ -1.83
RFX3-204ENST00000382004 MMP24-AS1A0A0U1RRL7 71 aa3.62□□□□□ -1.83
RFX3-204ENST00000382004 RPL37P61927 97 aaKnown RBP3.62□□□□□ -1.83
RFX3-204ENST00000382004 Q5XG85 94 aa3.61□□□□□ -1.83
RFX3-204ENST00000382004 SEC61BP60468 96 aaKnown RBP3.6□□□□□ -1.83
RFX3-204ENST00000382004 FP248Q71RG6 208 aaPredicted RBP3.6□□□□□ -1.83
RFX3-204ENST00000382004 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
RFX3-204ENST00000382004 ADM2Q7Z4H4 148 aa3.58□□□□□ -1.84
RFX3-204ENST00000382004 MGAM2Q2M2H8 2515 aa3.58□□□□□ -1.84
RFX3-204ENST00000382004 SPATA8Q6RVD6 105 aa3.57□□□□□ -1.84
RFX3-204ENST00000382004 A0A096LNT2 108 aa3.57□□□□□ -1.84
RFX3-204ENST00000382004 CYSTM1Q9H1C7 97 aa3.57□□□□□ -1.84
RFX3-204ENST00000382004 Q5VSD8 79 aa3.57□□□□□ -1.84
RFX3-204ENST00000382004 C20orf166-AS1Q96NR2 134 aa3.56□□□□□ -1.84
RFX3-204ENST00000382004 EPG5Q9HCE0 2579 aa3.56□□□□□ -1.84
RFX3-204ENST00000382004 PLAC8Q9NZF1 115 aa3.55□□□□□ -1.84
RFX3-204ENST00000382004 CEP295Q9C0D2 2601 aa3.55□□□□□ -1.84
RFX3-204ENST00000382004 Q8NDZ9 215 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms