RNA–Protein interactions for RNA: ENST00000381271.6

KLHL42-201, Transcript of kelch like family member 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL42, Length 6,703 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-201ENST00000381271 ZNF575Q86XF7 245 aa10.54□□□□□ -0.72
KLHL42-201ENST00000381271 IGLV5-37A0A075B6J1 123 aa10.53□□□□□ -0.72
KLHL42-201ENST00000381271 LINC00304Q8N9R0 145 aa10.53□□□□□ -0.72
KLHL42-201ENST00000381271 UQCR11O14957 56 aa10.51□□□□□ -0.73
KLHL42-201ENST00000381271 RPS28P62857 69 aaKnown RBP10.51□□□□□ -0.73
KLHL42-201ENST00000381271 LITAFQ99732 161 aa10.51□□□□□ -0.73
KLHL42-201ENST00000381271 KRTAP10-11P60412 298 aa10.51□□□□□ -0.73
KLHL42-201ENST00000381271 C8orf17Q9NRJ1 99 aa10.49□□□□□ -0.73
KLHL42-201ENST00000381271 MIR22HGQ0VDD5 57 aa10.49□□□□□ -0.73
KLHL42-201ENST00000381271 C15orf56Q8N910 161 aa10.47□□□□□ -0.73
KLHL42-201ENST00000381271 K7EIL1 84 aa10.46□□□□□ -0.73
KLHL42-201ENST00000381271 KCNQ1DNQ9H478 68 aa10.45□□□□□ -0.74
KLHL42-201ENST00000381271 CSNK1G2-AS1Q8NCQ2 148 aa10.45□□□□□ -0.74
KLHL42-201ENST00000381271 EIF4EBP3O60516 100 aaPredicted RBP10.44□□□□□ -0.74
KLHL42-201ENST00000381271 ZNF861PO60384 105 aa10.43□□□□□ -0.74
KLHL42-201ENST00000381271 A0A1B0GVX0 72 aa10.43□□□□□ -0.74
KLHL42-201ENST00000381271 PRR15Q8IV56 129 aa10.43□□□□□ -0.74
KLHL42-201ENST00000381271 LINC00528Q8N1L1 170 aa10.42□□□□□ -0.74
KLHL42-201ENST00000381271 Q8N377 158 aa10.41□□□□□ -0.74
KLHL42-201ENST00000381271 EPG5Q9HCE0 2579 aa10.41□□□□□ -0.74
KLHL42-201ENST00000381271 DNAH12Q6ZR08 3092 aa10.4□□□□□ -0.74
KLHL42-201ENST00000381271 Q8N1X5 172 aa10.39□□□□□ -0.75
KLHL42-201ENST00000381271 ANKRD17O75179 2603 aaKnown RBP10.39□□□□□ -0.75
KLHL42-201ENST00000381271 A0A087WTM6 91 aa10.38□□□□□ -0.75
KLHL42-201ENST00000381271 RBM12B-AS1Q9P1G2 102 aa10.37□□□□□ -0.75
KLHL42-201ENST00000381271 CYP4F30PQ9H0H9 118 aa10.37□□□□□ -0.75
KLHL42-201ENST00000381271 FLNBO75369 2602 aaKnown RBP10.36□□□□□ -0.75
KLHL42-201ENST00000381271 IGLV5-48A0A075B6I7 105 aa10.35□□□□□ -0.75
KLHL42-201ENST00000381271 KRTAP10-3P60369 221 aa10.34□□□□□ -0.75
KLHL42-201ENST00000381271 PCSK5Q92824 1860 aa10.34□□□□□ -0.75
KLHL42-201ENST00000381271 ERC2-IT1O76042 136 aa10.33□□□□□ -0.76
KLHL42-201ENST00000381271 CASC10Q5T4H9 136 aa10.33□□□□□ -0.76
KLHL42-201ENST00000381271 PSORS1C2Q9UIG4 136 aa10.32□□□□□ -0.76
KLHL42-201ENST00000381271 IGLV7-43P04211 117 aa10.31□□□□□ -0.76
KLHL42-201ENST00000381271 PRR34Q9NV39 138 aa10.29□□□□□ -0.76
KLHL42-201ENST00000381271 C19orf73Q9NVV2 129 aa10.28□□□□□ -0.76
KLHL42-201ENST00000381271 LINC00336Q6ZUF6 198 aa10.27□□□□□ -0.77
KLHL42-201ENST00000381271 C9orf163Q8N9P6 203 aa10.26□□□□□ -0.77
KLHL42-201ENST00000381271 CDC42SE1Q9NRR8 79 aa10.26□□□□□ -0.77
KLHL42-201ENST00000381271 GIG44P09565 113 aaPredicted RBP10.25□□□□□ -0.77
KLHL42-201ENST00000381271 FAM104AQ969W3 186 aa10.25□□□□□ -0.77
KLHL42-201ENST00000381271 HECTD1Q9ULT8 2610 aa10.24□□□□□ -0.77
KLHL42-201ENST00000381271 PRRC2CQ9Y520 2896 aaKnown RBP10.24□□□□□ -0.77
KLHL42-201ENST00000381271 CEP350Q5VT06 3117 aa10.24□□□□□ -0.77
KLHL42-201ENST00000381271 CAMK2N1Q7Z7J9 78 aa10.23□□□□□ -0.77
KLHL42-201ENST00000381271 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
KLHL42-201ENST00000381271 KLKP1Q107X0 134 aa10.21□□□□□ -0.78
KLHL42-201ENST00000381271 H7BZZ5 65 aa10.2□□□□□ -0.78
KLHL42-201ENST00000381271 Q6ZSA8 131 aa10.19□□□□□ -0.78
KLHL42-201ENST00000381271 TLX1NBP0CAT3 122 aa10.18□□□□□ -0.78
KLHL42-201ENST00000381271 A0A1W2PNM2 257 aa10.18□□□□□ -0.78
KLHL42-201ENST00000381271 USP24Q9UPU5 2620 aa10.18□□□□□ -0.78
KLHL42-201ENST00000381271 PLA2G2DQ9UNK4 145 aa10.18□□□□□ -0.78
KLHL42-201ENST00000381271 KLK9Q2XQG4 91 aa10.17□□□□□ -0.78
KLHL42-201ENST00000381271 KTN1-AS1Q86SY8 53 aa10.14□□□□□ -0.79
KLHL42-201ENST00000381271 LINC00612Q8N6U2 182 aa10.13□□□□□ -0.79
KLHL42-201ENST00000381271 WIPF1O43516 503 aa10.12□□□□□ -0.79
KLHL42-201ENST00000381271 LUZP6Q538Z0 58 aa10.12□□□□□ -0.79
KLHL42-201ENST00000381271 PCNTO95613 3336 aa10.11□□□□□ -0.79
KLHL42-201ENST00000381271 LCA10Q71F78 164 aa10.11□□□□□ -0.79
KLHL42-201ENST00000381271 MGAM2Q2M2H8 2515 aa10.11□□□□□ -0.79
KLHL42-201ENST00000381271 PRR26Q8N8Z3 221 aa10.11□□□□□ -0.79
KLHL42-201ENST00000381271 CD164Q04900 197 aa10.1□□□□□ -0.79
KLHL42-201ENST00000381271 C5orf42Q9H799 3197 aa10.09□□□□□ -0.79
KLHL42-201ENST00000381271 TNP2Q05952 138 aa10.09□□□□□ -0.79
KLHL42-201ENST00000381271 CR1P17927 2039 aa10.09□□□□□ -0.79
KLHL42-201ENST00000381271 A0A096LNT2 108 aa10.07□□□□□ -0.8
KLHL42-201ENST00000381271 CNBPP62633 177 aaKnown RBP10.07□□□□□ -0.8
KLHL42-201ENST00000381271 IGLV7-46A0A075B6I9 117 aa10.05□□□□□ -0.8
KLHL42-201ENST00000381271 BPTFQ12830 3046 aa10.04□□□□□ -0.8
KLHL42-201ENST00000381271 SPANXA2-OT1Q8N9U9 137 aa10.01□□□□□ -0.81
KLHL42-201ENST00000381271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.99□□□□□ -0.81
KLHL42-201ENST00000381271 Q1T7F1 81 aa9.98□□□□□ -0.81
KLHL42-201ENST00000381271 Q5VSD8 79 aa9.98□□□□□ -0.81
KLHL42-201ENST00000381271 ATRQ13535 2644 aa9.97□□□□□ -0.81
KLHL42-201ENST00000381271 LINC00483Q53H64 154 aa9.97□□□□□ -0.81
KLHL42-201ENST00000381271 A0A1B0GU33 70 aa9.97□□□□□ -0.81
KLHL42-201ENST00000381271 HRES1P13985 223 aa9.94□□□□□ -0.82
KLHL42-201ENST00000381271 KRTAP1-3Q8IUG1 177 aa9.92□□□□□ -0.82
KLHL42-201ENST00000381271 MAST4O15021 2626 aa9.92□□□□□ -0.82
KLHL42-201ENST00000381271 OCR1Q9BZK8 76 aa9.9□□□□□ -0.83
KLHL42-201ENST00000381271 S4R3F8 94 aa9.86□□□□□ -0.83
KLHL42-201ENST00000381271 KRTAP1-1Q07627 177 aa9.85□□□□□ -0.83
KLHL42-201ENST00000381271 Q8N9P0 234 aaPredicted RBP9.85□□□□□ -0.83
KLHL42-201ENST00000381271 RANBP2P49792 3224 aaKnown RBP9.84□□□□□ -0.83
KLHL42-201ENST00000381271 FLG2Q5D862 2391 aaPredicted RBP9.84□□□□□ -0.83
KLHL42-201ENST00000381271 MKI67P46013 3256 aaKnown RBP9.81□□□□□ -0.84
KLHL42-201ENST00000381271 CHD7Q9P2D1 2997 aa9.81□□□□□ -0.84
KLHL42-201ENST00000381271 FAM229BQ4G0N7 80 aa9.8□□□□□ -0.84
KLHL42-201ENST00000381271 LAMA3Q16787 3333 aa9.8□□□□□ -0.84
KLHL42-201ENST00000381271 ZCCHC13Q8WW36 166 aaKnown RBP9.8□□□□□ -0.84
KLHL42-201ENST00000381271 PRAC1Q96KF2 57 aa9.8□□□□□ -0.84
KLHL42-201ENST00000381271 HELZ2Q9BYK8 2649 aaKnown RBP9.8□□□□□ -0.84
KLHL42-201ENST00000381271 CSAG1Q6PB30 78 aa9.8□□□□□ -0.84
KLHL42-201ENST00000381271 BRCA2P51587 3418 aa9.79□□□□□ -0.84
KLHL42-201ENST00000381271 FLNAP21333 2647 aaKnown RBP9.76□□□□□ -0.85
KLHL42-201ENST00000381271 ITPR3Q14573 2671 aa9.76□□□□□ -0.85
KLHL42-201ENST00000381271 CFAP46Q8IYW2 2715 aa9.75□□□□□ -0.85
KLHL42-201ENST00000381271 CENPEQ02224 2701 aa9.74□□□□□ -0.85
KLHL42-201ENST00000381271 MMP24-AS1A0A0U1RRL7 71 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms