RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 TMEM126AQ9H061 195 aa12.12□□□□□ -0.47
CDPF1-202ENST00000381037 SPANXCQ9NY87 97 aa12.12□□□□□ -0.47
CDPF1-202ENST00000381037 TMEM238C9JI98 176 aa12.11□□□□□ -0.47
CDPF1-202ENST00000381037 ZNF861PO60384 105 aa12.11□□□□□ -0.47
CDPF1-202ENST00000381037 KRTAP13-1Q8IUC0 172 aa12.11□□□□□ -0.47
CDPF1-202ENST00000381037 CEND1Q8N111 149 aa12.11□□□□□ -0.47
CDPF1-202ENST00000381037 SPANXB1Q9NS25 103 aaPredicted RBP12.11□□□□□ -0.47
CDPF1-202ENST00000381037 REG3GQ6UW15 175 aa12.1□□□□□ -0.47
CDPF1-202ENST00000381037 TRBV10-3A0A0K0K1G6 114 aa12.09□□□□□ -0.47
CDPF1-202ENST00000381037 KCNQ1DNQ9H478 68 aa12.09□□□□□ -0.47
CDPF1-202ENST00000381037 H0Y9J4 135 aa12.08□□□□□ -0.48
CDPF1-202ENST00000381037 GTF2H5Q6ZYL4 71 aa12.08□□□□□ -0.48
CDPF1-202ENST00000381037 DIRC1Q969H9 104 aa12.08□□□□□ -0.48
CDPF1-202ENST00000381037 PPDPFQ9H3Y8 114 aa12.08□□□□□ -0.48
CDPF1-202ENST00000381037 IGLV6-57P01721 117 aa12.07□□□□□ -0.48
CDPF1-202ENST00000381037 TNXBP22105 4242 aa12.07□□□□□ -0.48
CDPF1-202ENST00000381037 HERC1Q15751 4861 aa12.07□□□□□ -0.48
CDPF1-202ENST00000381037 SPRR1AP35321 89 aa12.06□□□□□ -0.48
CDPF1-202ENST00000381037 KRTAP4-16G5E9R7 235 aaPredicted RBP12.05□□□□□ -0.48
CDPF1-202ENST00000381037 PRYO14603 147 aa12.05□□□□□ -0.48
CDPF1-202ENST00000381037 IFITM1P13164 125 aa12.05□□□□□ -0.48
CDPF1-202ENST00000381037 RPL28P46779 137 aaKnown RBP12.05□□□□□ -0.48
CDPF1-202ENST00000381037 FXYD2P54710 66 aa12.05□□□□□ -0.48
CDPF1-202ENST00000381037 LINC01600Q96MT4 127 aa12.05□□□□□ -0.48
CDPF1-202ENST00000381037 MT1HL1P0DM35 61 aa12.04□□□□□ -0.48
CDPF1-202ENST00000381037 HIST1H4GQ99525 98 aa12.04□□□□□ -0.48
CDPF1-202ENST00000381037 H3BUT2 72 aa12.03□□□□□ -0.48
CDPF1-202ENST00000381037 MUSTN1Q8IVN3 82 aa12.03□□□□□ -0.48
CDPF1-202ENST00000381037 A0A1W2PPM0 123 aa12.02□□□□□ -0.49
CDPF1-202ENST00000381037 K7EP34 96 aa12.02□□□□□ -0.49
CDPF1-202ENST00000381037 KRTAP1-4P0C5Y4 121 aa12.02□□□□□ -0.49
CDPF1-202ENST00000381037 PRLHP81277 87 aa12.02□□□□□ -0.49
CDPF1-202ENST00000381037 FABP2P12104 132 aa12.01□□□□□ -0.49
CDPF1-202ENST00000381037 UBE2AP49459 152 aa12.01□□□□□ -0.49
CDPF1-202ENST00000381037 FAM19A1Q7Z5A9 133 aa12.01□□□□□ -0.49
CDPF1-202ENST00000381037 LINC00337Q8N6G1 96 aa12.01□□□□□ -0.49
CDPF1-202ENST00000381037 TMEM238LA0A1B0GVL6 79 aa12□□□□□ -0.49
CDPF1-202ENST00000381037 A0A1B0GWB2 263 aa12□□□□□ -0.49
CDPF1-202ENST00000381037 A6NJY4 79 aa12□□□□□ -0.49
CDPF1-202ENST00000381037 J3QL48 77 aa12□□□□□ -0.49
CDPF1-202ENST00000381037 S100A7L2Q5SY68 101 aa12□□□□□ -0.49
CDPF1-202ENST00000381037 COPS9Q8WXC6 57 aa12□□□□□ -0.49
CDPF1-202ENST00000381037 RAB37Q96AX2 223 aa11.99□□□□□ -0.49
CDPF1-202ENST00000381037 NHP2Q9NX24 153 aaKnown RBP11.99□□□□□ -0.49
CDPF1-202ENST00000381037 KRTAP10-8P60410 259 aa11.97□□□□□ -0.49
CDPF1-202ENST00000381037 SPCS1Q9Y6A9 102 aa11.97□□□□□ -0.49
CDPF1-202ENST00000381037 TRAV23DV6A0A075B6W5 121 aa11.95□□□□□ -0.5
CDPF1-202ENST00000381037 B5MCH6 92 aa11.94□□□□□ -0.5
CDPF1-202ENST00000381037 OR13C6PQ8NH95 151 aa11.93□□□□□ -0.5
CDPF1-202ENST00000381037 ETDCA0A1B0GVM5 59 aa11.93□□□□□ -0.5
CDPF1-202ENST00000381037 ZNF73O43830 326 aaPredicted RBP11.93□□□□□ -0.5
CDPF1-202ENST00000381037 K7ERJ3 54 aa11.92□□□□□ -0.5
CDPF1-202ENST00000381037 HIGD2AQ9BW72 106 aa11.91□□□□□ -0.5
CDPF1-202ENST00000381037 PRR26Q8N8Z3 221 aa11.9□□□□□ -0.5
CDPF1-202ENST00000381037 CBY1Q9Y3M2 126 aa11.9□□□□□ -0.5
CDPF1-202ENST00000381037 A4D1N5 150 aa11.89□□□□□ -0.51
CDPF1-202ENST00000381037 Q6ZRX8 168 aa11.89□□□□□ -0.51
CDPF1-202ENST00000381037 SMCR5Q8TEV8 140 aa11.89□□□□□ -0.51
CDPF1-202ENST00000381037 NAA38Q9BRA0 125 aaKnown RBP11.89□□□□□ -0.51
CDPF1-202ENST00000381037 OCIAD2Q56VL3 154 aa11.88□□□□□ -0.51
CDPF1-202ENST00000381037 Q9BRP9 147 aa11.88□□□□□ -0.51
CDPF1-202ENST00000381037 K7ERU9 68 aa11.86□□□□□ -0.51
CDPF1-202ENST00000381037 TRAV13-2A0A0B4J235 113 aa11.86□□□□□ -0.51
CDPF1-202ENST00000381037 LYRM7Q5U5X0 104 aa11.86□□□□□ -0.51
CDPF1-202ENST00000381037 ANAPC11Q9NYG5 84 aa11.86□□□□□ -0.51
CDPF1-202ENST00000381037 A0A087X002 238 aa11.85□□□□□ -0.51
CDPF1-202ENST00000381037 F8W1H4 67 aa11.84□□□□□ -0.51
CDPF1-202ENST00000381037 ERC2-IT1O76042 136 aa11.84□□□□□ -0.51
CDPF1-202ENST00000381037 C6orf99Q4VX62 202 aa11.83□□□□□ -0.52
CDPF1-202ENST00000381037 SPRR4Q96PI1 79 aa11.83□□□□□ -0.52
CDPF1-202ENST00000381037 FAM229BQ4G0N7 80 aa11.82□□□□□ -0.52
CDPF1-202ENST00000381037 RPL13AP40429 203 aaKnown RBP11.81□□□□□ -0.52
CDPF1-202ENST00000381037 ELOF1P60002 83 aaKnown RBP11.81□□□□□ -0.52
CDPF1-202ENST00000381037 TRBV7-6A0A0J9YX20 115 aa11.8□□□□□ -0.52
CDPF1-202ENST00000381037 CRYGAP11844 174 aa11.8□□□□□ -0.52
CDPF1-202ENST00000381037 A0A0B4J2C4 111 aa11.79□□□□□ -0.52
CDPF1-202ENST00000381037 KRTAP13-2Q52LG2 175 aa11.79□□□□□ -0.52
CDPF1-202ENST00000381037 SMIM11BQ8TCY0 68 aa11.79□□□□□ -0.52
CDPF1-202ENST00000381037 CFC1BP0CG36 223 aa11.78□□□□□ -0.52
CDPF1-202ENST00000381037 CFC1P0CG37 223 aa11.78□□□□□ -0.52
CDPF1-202ENST00000381037 PRO1854Q9UHT4 67 aa11.78□□□□□ -0.52
CDPF1-202ENST00000381037 TSPAN13O95857 204 aa11.78□□□□□ -0.52
CDPF1-202ENST00000381037 ZNF706Q9Y5V0 76 aaPredicted RBP11.78□□□□□ -0.52
CDPF1-202ENST00000381037 COX7BP24311 80 aa11.77□□□□□ -0.53
CDPF1-202ENST00000381037 TRBV20-1A0A075B6N2 111 aa11.76□□□□□ -0.53
CDPF1-202ENST00000381037 LINC00483Q53H64 154 aa11.76□□□□□ -0.53
CDPF1-202ENST00000381037 DHRS4-AS1Q9P1J3 65 aa11.75□□□□□ -0.53
CDPF1-202ENST00000381037 HMCN2Q8NDA2 5059 aa11.73□□□□□ -0.53
CDPF1-202ENST00000381037 H3BMG7 143 aa11.73□□□□□ -0.53
CDPF1-202ENST00000381037 GAGE2AQ6NT46 116 aa11.71□□□□□ -0.53
CDPF1-202ENST00000381037 ST20-AS1Q8NBB2 130 aa11.71□□□□□ -0.53
CDPF1-202ENST00000381037 TYMSOSQ8TAI1 123 aa11.71□□□□□ -0.53
CDPF1-202ENST00000381037 PRO0461Q9UI25 63 aa11.71□□□□□ -0.53
CDPF1-202ENST00000381037 VPS25Q9BRG1 176 aa11.71□□□□□ -0.54
CDPF1-202ENST00000381037 J3QR89 54 aa11.7□□□□□ -0.54
CDPF1-202ENST00000381037 C3orf22Q8N5N4 141 aa11.7□□□□□ -0.54
CDPF1-202ENST00000381037 PSMB2P49721 201 aa11.67□□□□□ -0.54
CDPF1-202ENST00000381037 SCGB1C2P0DMR2 95 aa11.66□□□□□ -0.54
CDPF1-202ENST00000381037 SPRR1BP22528 89 aa11.66□□□□□ -0.54
CDPF1-202ENST00000381037 TCL1BO95988 128 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms