RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 PRLHP81277 87 aa8.29□□□□□ -1.08
CDX2-201ENST00000381020 TENM3Q9P273 2699 aa8.29□□□□□ -1.08
CDX2-201ENST00000381020 UQCRQO14949 82 aa8.29□□□□□ -1.08
CDX2-201ENST00000381020 GVQW2A0A096LPI5 108 aaPredicted RBP8.29□□□□□ -1.08
CDX2-201ENST00000381020 Q6Q795 121 aa8.28□□□□□ -1.08
CDX2-201ENST00000381020 IGLV6-57P01721 117 aa8.28□□□□□ -1.08
CDX2-201ENST00000381020 SERTAD4-AS1Q5TG53 156 aa8.28□□□□□ -1.08
CDX2-201ENST00000381020 Q6JHZ5 121 aa8.27□□□□□ -1.09
CDX2-201ENST00000381020 REG3GQ6UW15 175 aa8.27□□□□□ -1.09
CDX2-201ENST00000381020 TM2D3Q9BRN9 247 aa8.27□□□□□ -1.09
CDX2-201ENST00000381020 B9D2Q9BPU9 175 aa8.26□□□□□ -1.09
CDX2-201ENST00000381020 CDK2AP2O75956 126 aa8.26□□□□□ -1.09
CDX2-201ENST00000381020 CHTF8P0CG12 524 aa8.26□□□□□ -1.09
CDX2-201ENST00000381020 SMCR5Q8TEV8 140 aa8.26□□□□□ -1.09
CDX2-201ENST00000381020 PKIGQ9Y2B9 76 aa8.25□□□□□ -1.09
CDX2-201ENST00000381020 C1orf137Q5JT78 98 aa8.25□□□□□ -1.09
CDX2-201ENST00000381020 SNURFQ9Y675 71 aa8.25□□□□□ -1.09
CDX2-201ENST00000381020 ELOF1P60002 83 aaKnown RBP8.24□□□□□ -1.09
CDX2-201ENST00000381020 ATP5EP2Q5VTU8 51 aa8.24□□□□□ -1.09
CDX2-201ENST00000381020 Q8NDZ9 215 aa8.24□□□□□ -1.09
CDX2-201ENST00000381020 F8WDY8 70 aa8.24□□□□□ -1.09
CDX2-201ENST00000381020 Q6ZVQ6 151 aa8.23□□□□□ -1.09
CDX2-201ENST00000381020 Q8N9L7 120 aa8.23□□□□□ -1.09
CDX2-201ENST00000381020 COX7CP15954 63 aa8.23□□□□□ -1.09
CDX2-201ENST00000381020 LRCOL1A6NCL2 159 aa8.22□□□□□ -1.09
CDX2-201ENST00000381020 SERP2Q8N6R1 65 aa8.22□□□□□ -1.09
CDX2-201ENST00000381020 ST20-AS1Q8NBB2 130 aa8.22□□□□□ -1.09
CDX2-201ENST00000381020 TRBV7-7A0A0K0K1E9 115 aa8.21□□□□□ -1.09
CDX2-201ENST00000381020 PRYO14603 147 aa8.21□□□□□ -1.1
CDX2-201ENST00000381020 HRCT1Q6UXD1 115 aa8.2□□□□□ -1.1
CDX2-201ENST00000381020 IGLV9-49A0A0B4J1Y8 123 aa8.2□□□□□ -1.1
CDX2-201ENST00000381020 H0Y9J4 135 aa8.2□□□□□ -1.1
CDX2-201ENST00000381020 DEFB116Q30KQ4 102 aa8.19□□□□□ -1.1
CDX2-201ENST00000381020 NHLRC4P0CG21 123 aaPredicted RBP8.19□□□□□ -1.1
CDX2-201ENST00000381020 PHF5AQ7RTV0 110 aaKnown RBP8.19□□□□□ -1.1
CDX2-201ENST00000381020 LINC01547P58512 204 aaPredicted RBP8.19□□□□□ -1.1
CDX2-201ENST00000381020 NBDYA0A0U1RRE5 68 aa8.18□□□□□ -1.1
CDX2-201ENST00000381020 NDUFS5O43920 106 aa8.18□□□□□ -1.1
CDX2-201ENST00000381020 Q6ZQT0 140 aa8.18□□□□□ -1.1
CDX2-201ENST00000381020 ZNF469Q96JG9 3925 aaPredicted RBP8.18□□□□□ -1.1
CDX2-201ENST00000381020 Q6ZRX8 168 aa8.17□□□□□ -1.1
CDX2-201ENST00000381020 WFDC13Q8IUB5 93 aa8.16□□□□□ -1.1
CDX2-201ENST00000381020 LINC00528Q8N1L1 170 aa8.16□□□□□ -1.1
CDX2-201ENST00000381020 LINC00474Q9P2X8 69 aa8.16□□□□□ -1.1
CDX2-201ENST00000381020 PKD1L1Q8TDX9 2849 aa8.16□□□□□ -1.1
CDX2-201ENST00000381020 A0A087WSZ3 146 aa8.15□□□□□ -1.11
CDX2-201ENST00000381020 Q9BRP9 147 aa8.15□□□□□ -1.11
CDX2-201ENST00000381020 J3KT08 172 aa8.14□□□□□ -1.11
CDX2-201ENST00000381020 IGLV5-52A0A0A0MRZ9 124 aa8.13□□□□□ -1.11
CDX2-201ENST00000381020 TRBV7-6A0A0J9YX20 115 aa8.13□□□□□ -1.11
CDX2-201ENST00000381020 NDUFB1O75438 58 aa8.13□□□□□ -1.11
CDX2-201ENST00000381020 PRR4Q16378 134 aa8.13□□□□□ -1.11
CDX2-201ENST00000381020 A0A0U1RQV1 116 aa8.13□□□□□ -1.11
CDX2-201ENST00000381020 C16orf90A8MZG2 172 aa8.13□□□□□ -1.11
CDX2-201ENST00000381020 KCNQ1DNQ9H478 68 aa8.13□□□□□ -1.11
CDX2-201ENST00000381020 TRRAPQ9Y4A5 3859 aa8.12□□□□□ -1.11
CDX2-201ENST00000381020 C1orf134Q5TEV5 83 aa8.12□□□□□ -1.11
CDX2-201ENST00000381020 IGLV1-50A0A075B6I6 118 aa8.12□□□□□ -1.11
CDX2-201ENST00000381020 FAM30AQ9NZY2 134 aa8.12□□□□□ -1.11
CDX2-201ENST00000381020 A0A0G2JQZ4 141 aa8.11□□□□□ -1.11
CDX2-201ENST00000381020 A0A1W2PNN7 141 aa8.11□□□□□ -1.11
CDX2-201ENST00000381020 SPINK6Q6UWN8 80 aa8.1□□□□□ -1.11
CDX2-201ENST00000381020 MPLKIPQ8TAP9 179 aa8.1□□□□□ -1.11
CDX2-201ENST00000381020 APLNQ9ULZ1 77 aa8.1□□□□□ -1.11
CDX2-201ENST00000381020 LOC110117498A0A087WWA1 95 aa8.09□□□□□ -1.11
CDX2-201ENST00000381020 FAM236DA0A1B0GTK5 79 aa8.08□□□□□ -1.12
CDX2-201ENST00000381020 FAM236CP0DP71 79 aa8.08□□□□□ -1.12
CDX2-201ENST00000381020 ERC2-IT1O76042 136 aa8.08□□□□□ -1.12
CDX2-201ENST00000381020 KRTAP26-1Q6PEX3 210 aa8.08□□□□□ -1.12
CDX2-201ENST00000381020 Q8N377 158 aa8.08□□□□□ -1.12
CDX2-201ENST00000381020 EPM2AB3EWF7 344 aa8.08□□□□□ -1.12
CDX2-201ENST00000381020 LINC01600Q96MT4 127 aa8.08□□□□□ -1.12
CDX2-201ENST00000381020 C5orf47Q569G3 176 aa8.07□□□□□ -1.12
CDX2-201ENST00000381020 LINC00476Q8WZB0 136 aa8.06□□□□□ -1.12
CDX2-201ENST00000381020 MP68P56378 58 aa8.06□□□□□ -1.12
CDX2-201ENST00000381020 KRTAP1-5Q9BYS1 174 aa8.06□□□□□ -1.12
CDX2-201ENST00000381020 TLX1NBP0CAT3 122 aa8.05□□□□□ -1.12
CDX2-201ENST00000381020 BRK1Q8WUW1 75 aa8.05□□□□□ -1.12
CDX2-201ENST00000381020 TRAV7A0A075B6U4 112 aa8.04□□□□□ -1.12
CDX2-201ENST00000381020 RTL8CO15255 209 aa8.03□□□□□ -1.12
CDX2-201ENST00000381020 TMEM258P61165 79 aa8.03□□□□□ -1.12
CDX2-201ENST00000381020 CXCL6P80162 114 aa8.03□□□□□ -1.12
CDX2-201ENST00000381020 Q8NBF4 154 aa8.03□□□□□ -1.12
CDX2-201ENST00000381020 ANK3Q12955 4377 aaKnown RBP8.02□□□□□ -1.13
CDX2-201ENST00000381020 OBSCN-AS1Q96MR7 158 aa8.02□□□□□ -1.13
CDX2-201ENST00000381020 TRBV7-4A0A0J9YYF1 115 aa8.02□□□□□ -1.13
CDX2-201ENST00000381020 C9orf163Q8N9P6 203 aa8.02□□□□□ -1.13
CDX2-201ENST00000381020 TENM2Q9NT68 2774 aa8.02□□□□□ -1.13
CDX2-201ENST00000381020 CIRBP-AS1Q8TBR5 109 aa8.01□□□□□ -1.13
CDX2-201ENST00000381020 ZNF706Q9Y5V0 76 aaPredicted RBP7.99□□□□□ -1.13
CDX2-201ENST00000381020 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
CDX2-201ENST00000381020 SVIPQ8NHG7 77 aa7.98□□□□□ -1.13
CDX2-201ENST00000381020 PLA2G2DQ9UNK4 145 aa7.98□□□□□ -1.13
CDX2-201ENST00000381020 IGKV4-1P06312 121 aa7.98□□□□□ -1.13
CDX2-201ENST00000381020 A0A087WTM6 91 aa7.97□□□□□ -1.13
CDX2-201ENST00000381020 SMIM29Q86T20 159 aa7.97□□□□□ -1.13
CDX2-201ENST00000381020 CNBPP62633 177 aaKnown RBP7.96□□□□□ -1.13
CDX2-201ENST00000381020 RPL37AP61513 92 aaKnown RBP7.96□□□□□ -1.14
CDX2-201ENST00000381020 MOBPQ13875 183 aa7.96□□□□□ -1.14
CDX2-201ENST00000381020 TMEM254Q8TBM7 123 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms