RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 OBSCN-AS1Q96MR7 158 aa7.2□□□□□ -1.26
CLCN4-202ENST00000380833 A0A0G2JQZ4 141 aa7.2□□□□□ -1.26
CLCN4-202ENST00000380833 A0A1W2PNN7 141 aa7.2□□□□□ -1.26
CLCN4-202ENST00000380833 FN1P02751 2386 aaKnown RBP7.19□□□□□ -1.26
CLCN4-202ENST00000380833 CSNK1G2-AS1Q8NCQ2 148 aa7.19□□□□□ -1.26
CLCN4-202ENST00000380833 WDR87Q6ZQQ6 2873 aa7.19□□□□□ -1.26
CLCN4-202ENST00000380833 A0A0D9SG42 100 aa7.18□□□□□ -1.26
CLCN4-202ENST00000380833 TLN2Q9Y4G6 2542 aa7.18□□□□□ -1.26
CLCN4-202ENST00000380833 PTPRBP23467 1997 aa7.18□□□□□ -1.26
CLCN4-202ENST00000380833 C9orf163Q8N9P6 203 aa7.18□□□□□ -1.26
CLCN4-202ENST00000380833 PLA2G2DQ9UNK4 145 aa7.17□□□□□ -1.26
CLCN4-202ENST00000380833 TLX1NBP0CAT3 122 aa7.17□□□□□ -1.26
CLCN4-202ENST00000380833 CPAMD8Q8IZJ3 1885 aa7.17□□□□□ -1.26
CLCN4-202ENST00000380833 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
CLCN4-202ENST00000380833 SEC61BP60468 96 aaKnown RBP7.16□□□□□ -1.26
CLCN4-202ENST00000380833 ZNF462Q96JM2 2506 aa7.15□□□□□ -1.26
CLCN4-202ENST00000380833 GOLGB1Q14789 3259 aaKnown RBP7.15□□□□□ -1.26
CLCN4-202ENST00000380833 M0R2T5 61 aa7.15□□□□□ -1.26
CLCN4-202ENST00000380833 C8orf17Q9NRJ1 99 aa7.15□□□□□ -1.26
CLCN4-202ENST00000380833 F8P00451 2351 aa7.15□□□□□ -1.27
CLCN4-202ENST00000380833 ABCA12Q86UK0 2595 aa7.14□□□□□ -1.27
CLCN4-202ENST00000380833 IGLV5-37A0A075B6J1 123 aa7.14□□□□□ -1.27
CLCN4-202ENST00000380833 IGLV7-46A0A075B6I9 117 aa7.14□□□□□ -1.27
CLCN4-202ENST00000380833 KRTAP10-11P60412 298 aa7.13□□□□□ -1.27
CLCN4-202ENST00000380833 KCNQ1DNQ9H478 68 aa7.12□□□□□ -1.27
CLCN4-202ENST00000380833 ZNF575Q86XF7 245 aa7.12□□□□□ -1.27
CLCN4-202ENST00000380833 LINC00304Q8N9R0 145 aa7.11□□□□□ -1.27
CLCN4-202ENST00000380833 EIF4EBP3O60516 100 aaPredicted RBP7.1□□□□□ -1.27
CLCN4-202ENST00000380833 K7EIL1 84 aa7.09□□□□□ -1.27
CLCN4-202ENST00000380833 SPINK7P58062 85 aa7.09□□□□□ -1.27
CLCN4-202ENST00000380833 CAMK2N1Q7Z7J9 78 aa7.09□□□□□ -1.27
CLCN4-202ENST00000380833 Q8NAQ8 132 aa7.09□□□□□ -1.27
CLCN4-202ENST00000380833 COL27A1Q8IZC6 1860 aaPredicted RBP7.08□□□□□ -1.28
CLCN4-202ENST00000380833 GVQW2A0A096LPI5 108 aaPredicted RBP7.08□□□□□ -1.28
CLCN4-202ENST00000380833 IGFL1Q6UW32 110 aa7.08□□□□□ -1.28
CLCN4-202ENST00000380833 A0A1B0GVX0 72 aa7.07□□□□□ -1.28
CLCN4-202ENST00000380833 LINC00528Q8N1L1 170 aa7.07□□□□□ -1.28
CLCN4-202ENST00000380833 SETD2Q9BYW2 2564 aaPredicted RBP7.05□□□□□ -1.28
CLCN4-202ENST00000380833 CENPFP49454 3210 aa7.05□□□□□ -1.28
CLCN4-202ENST00000380833 C15orf56Q8N910 161 aa7.05□□□□□ -1.28
CLCN4-202ENST00000380833 Q8N1X5 172 aa7.04□□□□□ -1.28
CLCN4-202ENST00000380833 MUC22E2RYF6 1773 aaPredicted RBP7.04□□□□□ -1.28
CLCN4-202ENST00000380833 LINC00483Q53H64 154 aa7.03□□□□□ -1.28
CLCN4-202ENST00000380833 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
CLCN4-202ENST00000380833 Q8N377 158 aa7.02□□□□□ -1.29
CLCN4-202ENST00000380833 IGLV1-50A0A075B6I6 118 aa7.02□□□□□ -1.29
CLCN4-202ENST00000380833 A0A1B0GU33 70 aa7.02□□□□□ -1.29
CLCN4-202ENST00000380833 A6NN06 94 aa7.02□□□□□ -1.29
CLCN4-202ENST00000380833 IGLV5-48A0A075B6I7 105 aa7□□□□□ -1.29
CLCN4-202ENST00000380833 C10orf142B7Z368 130 aa7□□□□□ -1.29
CLCN4-202ENST00000380833 ACANP16112 2415 aa7□□□□□ -1.29
CLCN4-202ENST00000380833 KRTAP10-3P60369 221 aa6.98□□□□□ -1.29
CLCN4-202ENST00000380833 A0A087WTM6 91 aa6.97□□□□□ -1.29
CLCN4-202ENST00000380833 CASC10Q5T4H9 136 aa6.97□□□□□ -1.29
CLCN4-202ENST00000380833 A0A1W2PNM2 257 aa6.96□□□□□ -1.3
CLCN4-202ENST00000380833 CHD8Q9HCK8 2581 aa6.95□□□□□ -1.3
CLCN4-202ENST00000380833 H3BNG1 76 aa6.95□□□□□ -1.3
CLCN4-202ENST00000380833 HRES1P13985 223 aa6.94□□□□□ -1.3
CLCN4-202ENST00000380833 POLQO75417 2590 aa6.94□□□□□ -1.3
CLCN4-202ENST00000380833 USP9XQ93008 2570 aaPredicted RBP6.93□□□□□ -1.3
CLCN4-202ENST00000380833 ROMO1P60602 79 aa6.93□□□□□ -1.3
CLCN4-202ENST00000380833 ZNF861PO60384 105 aa6.93□□□□□ -1.3
CLCN4-202ENST00000380833 Q6ZSA8 131 aa6.93□□□□□ -1.3
CLCN4-202ENST00000380833 COL4A2P08572 1712 aa6.93□□□□□ -1.3
CLCN4-202ENST00000380833 PSORS1C2Q9UIG4 136 aa6.92□□□□□ -1.3
CLCN4-202ENST00000380833 PKD1L2Q7Z442 2459 aa6.91□□□□□ -1.3
CLCN4-202ENST00000380833 NDUFAF8A1L188 74 aa6.89□□□□□ -1.31
CLCN4-202ENST00000380833 KRTAP25-1Q3LHN0 102 aa6.88□□□□□ -1.31
CLCN4-202ENST00000380833 SPTBN4Q9H254 2564 aa6.88□□□□□ -1.31
CLCN4-202ENST00000380833 TNP2Q05952 138 aa6.88□□□□□ -1.31
CLCN4-202ENST00000380833 MTORP42345 2549 aa6.87□□□□□ -1.31
CLCN4-202ENST00000380833 UTRNP46939 3433 aa6.87□□□□□ -1.31
CLCN4-202ENST00000380833 ANKRD17O75179 2603 aaKnown RBP6.86□□□□□ -1.31
CLCN4-202ENST00000380833 FASNP49327 2511 aaKnown RBP6.85□□□□□ -1.31
CLCN4-202ENST00000380833 SPRR4Q96PI1 79 aa6.85□□□□□ -1.31
CLCN4-202ENST00000380833 ANKRD11Q6UB99 2663 aaPredicted RBP6.84□□□□□ -1.32
CLCN4-202ENST00000380833 C19orf73Q9NVV2 129 aa6.82□□□□□ -1.32
CLCN4-202ENST00000380833 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
CLCN4-202ENST00000380833 LINC00612Q8N6U2 182 aa6.81□□□□□ -1.32
CLCN4-202ENST00000380833 SPATA8Q6RVD6 105 aa6.78□□□□□ -1.32
CLCN4-202ENST00000380833 PCSK5Q92824 1860 aa6.77□□□□□ -1.33
CLCN4-202ENST00000380833 A0A087X002 238 aa6.76□□□□□ -1.33
CLCN4-202ENST00000380833 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
CLCN4-202ENST00000380833 CEP295Q9C0D2 2601 aa6.75□□□□□ -1.33
CLCN4-202ENST00000380833 USP9YO00507 2555 aaPredicted RBP6.75□□□□□ -1.33
CLCN4-202ENST00000380833 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
CLCN4-202ENST00000380833 USP24Q9UPU5 2620 aa6.74□□□□□ -1.33
CLCN4-202ENST00000380833 MMP24-AS1A0A0U1RRL7 71 aa6.73□□□□□ -1.33
CLCN4-202ENST00000380833 A0A096LNT2 108 aa6.72□□□□□ -1.33
CLCN4-202ENST00000380833 Q5VSD8 79 aa6.72□□□□□ -1.33
CLCN4-202ENST00000380833 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
CLCN4-202ENST00000380833 GIG44P09565 113 aaPredicted RBP6.72□□□□□ -1.33
CLCN4-202ENST00000380833 BPTFQ12830 3046 aa6.71□□□□□ -1.34
CLCN4-202ENST00000380833 KLK9Q2XQG4 91 aa6.68□□□□□ -1.34
CLCN4-202ENST00000380833 H1FX-AS1Q4G0G2 97 aa6.68□□□□□ -1.34
CLCN4-202ENST00000380833 PRR34Q9NV39 138 aa6.68□□□□□ -1.34
CLCN4-202ENST00000380833 ZCCHC13Q8WW36 166 aaKnown RBP6.65□□□□□ -1.34
CLCN4-202ENST00000380833 MGAM2Q2M2H8 2515 aa6.65□□□□□ -1.35
CLCN4-202ENST00000380833 S4R3F8 94 aa6.64□□□□□ -1.35
CLCN4-202ENST00000380833 Q6ZR54 194 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms