RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 CFC1BP0CG36 223 aa11.5□□□□□ -0.57
SMN2-202ENST00000380742 CFC1P0CG37 223 aa11.5□□□□□ -0.57
SMN2-202ENST00000380742 SPRR1AP35321 89 aa11.5□□□□□ -0.57
SMN2-202ENST00000380742 KRTAP4-16G5E9R7 235 aaPredicted RBP11.48□□□□□ -0.57
SMN2-202ENST00000380742 CTAG1AP78358 180 aa11.48□□□□□ -0.57
SMN2-202ENST00000380742 FAM19A1Q7Z5A9 133 aa11.47□□□□□ -0.57
SMN2-202ENST00000380742 ABCA13Q86UQ4 5058 aa11.46□□□□□ -0.57
SMN2-202ENST00000380742 TMEM238LA0A1B0GVL6 79 aa11.46□□□□□ -0.57
SMN2-202ENST00000380742 A6NJY4 79 aa11.46□□□□□ -0.57
SMN2-202ENST00000380742 KRTAP13-1Q8IUC0 172 aa11.46□□□□□ -0.57
SMN2-202ENST00000380742 A0A0B4J2C4 111 aa11.45□□□□□ -0.58
SMN2-202ENST00000380742 ZNF73O43830 326 aaPredicted RBP11.45□□□□□ -0.58
SMN2-202ENST00000380742 CBY1Q9Y3M2 126 aa11.45□□□□□ -0.58
SMN2-202ENST00000380742 ZNF861PO60384 105 aa11.44□□□□□ -0.58
SMN2-202ENST00000380742 RPL13AP40429 203 aaKnown RBP11.44□□□□□ -0.58
SMN2-202ENST00000380742 PRLHP81277 87 aa11.44□□□□□ -0.58
SMN2-202ENST00000380742 BVES-AS1Q5T3Y7 98 aa11.44□□□□□ -0.58
SMN2-202ENST00000380742 ETDCA0A1B0GVM5 59 aa11.43□□□□□ -0.58
SMN2-202ENST00000380742 UBE2AP49459 152 aa11.43□□□□□ -0.58
SMN2-202ENST00000380742 SMIM11BQ8TCY0 68 aa11.43□□□□□ -0.58
SMN2-202ENST00000380742 RAB37Q96AX2 223 aa11.43□□□□□ -0.58
SMN2-202ENST00000380742 B5MCH6 92 aa11.42□□□□□ -0.58
SMN2-202ENST00000380742 NHP2Q9NX24 153 aaKnown RBP11.42□□□□□ -0.58
SMN2-202ENST00000380742 RPL28P46779 137 aaKnown RBP11.41□□□□□ -0.58
SMN2-202ENST00000380742 HINT1P49773 126 aaPredicted RBP11.41□□□□□ -0.58
SMN2-202ENST00000380742 C6orf99Q4VX62 202 aa11.41□□□□□ -0.58
SMN2-202ENST00000380742 SPINK6Q6UWN8 80 aa11.41□□□□□ -0.58
SMN2-202ENST00000380742 DIRC1Q969H9 104 aa11.41□□□□□ -0.58
SMN2-202ENST00000380742 H0Y9J4 135 aa11.4□□□□□ -0.59
SMN2-202ENST00000380742 PRO1854Q9UHT4 67 aa11.4□□□□□ -0.59
SMN2-202ENST00000380742 A0A1B0GWB2 263 aa11.39□□□□□ -0.59
SMN2-202ENST00000380742 K7ERJ3 54 aa11.39□□□□□ -0.59
SMN2-202ENST00000380742 INAFM2P0DMQ5 153 aa11.39□□□□□ -0.59
SMN2-202ENST00000380742 H7C2G1 150 aa11.38□□□□□ -0.59
SMN2-202ENST00000380742 M0R143 59 aa11.38□□□□□ -0.59
SMN2-202ENST00000380742 Q6ZRX8 168 aa11.38□□□□□ -0.59
SMN2-202ENST00000380742 SMCR5Q8TEV8 140 aa11.36□□□□□ -0.59
SMN2-202ENST00000380742 Q9BRP9 147 aa11.36□□□□□ -0.59
SMN2-202ENST00000380742 HIGD2AQ9BW72 106 aa11.36□□□□□ -0.59
SMN2-202ENST00000380742 TRBV7-6A0A0J9YX20 115 aa11.35□□□□□ -0.59
SMN2-202ENST00000380742 ELOF1P60002 83 aaKnown RBP11.35□□□□□ -0.59
SMN2-202ENST00000380742 COX7BP24311 80 aa11.34□□□□□ -0.59
SMN2-202ENST00000380742 FAT3Q8TDW7 4589 aa11.34□□□□□ -0.59
SMN2-202ENST00000380742 PCLOQ9Y6V0 5065 aa11.32□□□□□ -0.6
SMN2-202ENST00000380742 ERC2-IT1O76042 136 aa11.31□□□□□ -0.6
SMN2-202ENST00000380742 Q1RN00 199 aa11.31□□□□□ -0.6
SMN2-202ENST00000380742 LRP1Q07954 4544 aaKnown RBP11.31□□□□□ -0.6
SMN2-202ENST00000380742 BATFQ16520 125 aa11.29□□□□□ -0.6
SMN2-202ENST00000380742 MYCBP2O75592 4640 aa11.29□□□□□ -0.6
SMN2-202ENST00000380742 FLG2Q5D862 2391 aaPredicted RBP11.29□□□□□ -0.6
SMN2-202ENST00000380742 TSPAN13O95857 204 aa11.28□□□□□ -0.6
SMN2-202ENST00000380742 VAMP3Q15836 100 aa11.28□□□□□ -0.6
SMN2-202ENST00000380742 DHRS4-AS1Q9P1J3 65 aa11.28□□□□□ -0.6
SMN2-202ENST00000380742 PCP4L1A6NKN8 68 aa11.27□□□□□ -0.61
SMN2-202ENST00000380742 KRTAP1-4P0C5Y4 121 aa11.27□□□□□ -0.61
SMN2-202ENST00000380742 TRIAP1O43715 76 aa11.26□□□□□ -0.61
SMN2-202ENST00000380742 LINC00575Q6W349 94 aa11.24□□□□□ -0.61
SMN2-202ENST00000380742 SPRR4Q96PI1 79 aa11.24□□□□□ -0.61
SMN2-202ENST00000380742 ST20-AS1Q8NBB2 130 aa11.23□□□□□ -0.61
SMN2-202ENST00000380742 SNHG12Q9BXW3 62 aa11.23□□□□□ -0.61
SMN2-202ENST00000380742 PSMB2P49721 201 aa11.22□□□□□ -0.61
SMN2-202ENST00000380742 ANAPC11Q9NYG5 84 aa11.22□□□□□ -0.61
SMN2-202ENST00000380742 H0YGX0 51 aa11.21□□□□□ -0.61
SMN2-202ENST00000380742 LINC01600Q96MT4 127 aa11.2□□□□□ -0.62
SMN2-202ENST00000380742 FAM218AQ96MZ4 157 aa11.2□□□□□ -0.62
SMN2-202ENST00000380742 ZNF706Q9Y5V0 76 aaPredicted RBP11.2□□□□□ -0.62
SMN2-202ENST00000380742 SLC25A20O43772 301 aa11.19□□□□□ -0.62
SMN2-202ENST00000380742 hADV29S1A0JD25 119 aa11.18□□□□□ -0.62
SMN2-202ENST00000380742 OXTP01178 125 aa11.17□□□□□ -0.62
SMN2-202ENST00000380742 GAGE2AQ6NT46 116 aa11.17□□□□□ -0.62
SMN2-202ENST00000380742 NAA38Q9BRA0 125 aaKnown RBP11.17□□□□□ -0.62
SMN2-202ENST00000380742 TNXBP22105 4242 aa11.17□□□□□ -0.62
SMN2-202ENST00000380742 KRTAP29-1A8MX34 341 aaPredicted RBP11.16□□□□□ -0.62
SMN2-202ENST00000380742 COX6CP09669 75 aa11.16□□□□□ -0.62
SMN2-202ENST00000380742 LINC00483Q53H64 154 aa11.16□□□□□ -0.62
SMN2-202ENST00000380742 PRR26Q8N8Z3 221 aa11.16□□□□□ -0.62
SMN2-202ENST00000380742 CLEC2BQ92478 149 aa11.16□□□□□ -0.62
SMN2-202ENST00000380742 A0A087X002 238 aa11.16□□□□□ -0.62
SMN2-202ENST00000380742 TAX1BP3O14907 124 aa11.15□□□□□ -0.63
SMN2-202ENST00000380742 FAM229BQ4G0N7 80 aa11.15□□□□□ -0.63
SMN2-202ENST00000380742 LINC01547P58512 204 aaPredicted RBP11.14□□□□□ -0.63
SMN2-202ENST00000380742 Q6ZQY7 126 aa11.14□□□□□ -0.63
SMN2-202ENST00000380742 SCGB1C2P0DMR2 95 aa11.13□□□□□ -0.63
SMN2-202ENST00000380742 DEFB105AQ8NG35 78 aa11.13□□□□□ -0.63
SMN2-202ENST00000380742 IGLV5-48A0A075B6I7 105 aa11.12□□□□□ -0.63
SMN2-202ENST00000380742 MT1HL1P0DM35 61 aa11.12□□□□□ -0.63
SMN2-202ENST00000380742 CRYGAP11844 174 aa11.12□□□□□ -0.63
SMN2-202ENST00000380742 SPRR1BP22528 89 aa11.12□□□□□ -0.63
SMN2-202ENST00000380742 KRTAP10-8P60410 259 aa11.12□□□□□ -0.63
SMN2-202ENST00000380742 KRTAP13-2Q52LG2 175 aa11.12□□□□□ -0.63
SMN2-202ENST00000380742 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.11□□□□□ -0.63
SMN2-202ENST00000380742 A0A1B0GX51 115 aa11.1□□□□□ -0.63
SMN2-202ENST00000380742 C9orf118A6NHY6 69 aa11.1□□□□□ -0.63
SMN2-202ENST00000380742 H3BUT2 72 aa11.1□□□□□ -0.63
SMN2-202ENST00000380742 TEX49A0A1B0GTD5 131 aa11.09□□□□□ -0.63
SMN2-202ENST00000380742 SNCGO76070 127 aa11.09□□□□□ -0.63
SMN2-202ENST00000380742 Q8N377 158 aa11.09□□□□□ -0.63
SMN2-202ENST00000380742 COL5A1-AS1Q5SY13 56 aa11.08□□□□□ -0.64
SMN2-202ENST00000380742 C3orf22Q8N5N4 141 aa11.08□□□□□ -0.64
SMN2-202ENST00000380742 LST1O00453 97 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms