RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 LOC101927531A0A1B0GV80 90 aa7.23□□□□□ -1.25
LINC00654-201ENST00000379053 SSBP3-AS1Q7Z2R9 100 aa7.23□□□□□ -1.25
LINC00654-201ENST00000379053 MRPL34Q9BQ48 92 aaKnown RBP7.23□□□□□ -1.25
LINC00654-201ENST00000379053 A8MWP4 228 aa7.23□□□□□ -1.25
LINC00654-201ENST00000379053 IGLV6-57P01721 117 aa7.23□□□□□ -1.25
LINC00654-201ENST00000379053 DSCR10P59022 87 aa7.23□□□□□ -1.25
LINC00654-201ENST00000379053 OBSCN-AS1Q96MR7 158 aa7.23□□□□□ -1.25
LINC00654-201ENST00000379053 C9orf163Q8N9P6 203 aa7.21□□□□□ -1.25
LINC00654-201ENST00000379053 KCNQ1DNQ9H478 68 aa7.21□□□□□ -1.26
LINC00654-201ENST00000379053 C15orf56Q8N910 161 aa7.2□□□□□ -1.26
LINC00654-201ENST00000379053 APLNQ9ULZ1 77 aa7.2□□□□□ -1.26
LINC00654-201ENST00000379053 PRR34Q9NV39 138 aa7.19□□□□□ -1.26
LINC00654-201ENST00000379053 IGLV7-43P04211 117 aa7.18□□□□□ -1.26
LINC00654-201ENST00000379053 ANAPC11Q9NYG5 84 aa7.18□□□□□ -1.26
LINC00654-201ENST00000379053 IGLV5-37A0A075B6J1 123 aa7.18□□□□□ -1.26
LINC00654-201ENST00000379053 A8MUN3 132 aa7.17□□□□□ -1.26
LINC00654-201ENST00000379053 GIG44P09565 113 aaPredicted RBP7.17□□□□□ -1.26
LINC00654-201ENST00000379053 K7EQZ3 153 aa7.17□□□□□ -1.26
LINC00654-201ENST00000379053 IGFL1Q6UW32 110 aa7.17□□□□□ -1.26
LINC00654-201ENST00000379053 LCE6AA0A183 80 aa7.15□□□□□ -1.26
LINC00654-201ENST00000379053 PSORS1C2Q9UIG4 136 aa7.15□□□□□ -1.26
LINC00654-201ENST00000379053 C9orf129Q5T035 196 aaKnown RBP7.15□□□□□ -1.26
LINC00654-201ENST00000379053 KRTAP1-3Q8IUG1 177 aa7.15□□□□□ -1.27
LINC00654-201ENST00000379053 ZNF575Q86XF7 245 aa7.14□□□□□ -1.27
LINC00654-201ENST00000379053 KRTAP21-3Q3LHN1 58 aa7.14□□□□□ -1.27
LINC00654-201ENST00000379053 C8orf17Q9NRJ1 99 aa7.14□□□□□ -1.27
LINC00654-201ENST00000379053 SPINT4Q6UDR6 99 aa7.14□□□□□ -1.27
LINC00654-201ENST00000379053 LINC01600Q96MT4 127 aa7.13□□□□□ -1.27
LINC00654-201ENST00000379053 LINC00612Q8N6U2 182 aa7.13□□□□□ -1.27
LINC00654-201ENST00000379053 LITAFQ99732 161 aa7.13□□□□□ -1.27
LINC00654-201ENST00000379053 KRTAP1-1Q07627 177 aa7.12□□□□□ -1.27
LINC00654-201ENST00000379053 A0A1B0GVX0 72 aa7.12□□□□□ -1.27
LINC00654-201ENST00000379053 A0A1W2PNN7 141 aa7.11□□□□□ -1.27
LINC00654-201ENST00000379053 TLX1NBP0CAT3 122 aa7.11□□□□□ -1.27
LINC00654-201ENST00000379053 CYP4F30PQ9H0H9 118 aa7.1□□□□□ -1.27
LINC00654-201ENST00000379053 A0A0G2JQZ4 141 aa7.1□□□□□ -1.27
LINC00654-201ENST00000379053 TNP2Q05952 138 aa7.09□□□□□ -1.27
LINC00654-201ENST00000379053 PRR15Q8IV56 129 aa7.09□□□□□ -1.27
LINC00654-201ENST00000379053 Q6ZSA8 131 aa7.09□□□□□ -1.27
LINC00654-201ENST00000379053 CNBPP62633 177 aaKnown RBP7.09□□□□□ -1.27
LINC00654-201ENST00000379053 HELZ2Q9BYK8 2649 aaKnown RBP7.09□□□□□ -1.28
LINC00654-201ENST00000379053 CD164Q04900 197 aa7.08□□□□□ -1.28
LINC00654-201ENST00000379053 ERC2-IT1O76042 136 aa7.08□□□□□ -1.28
LINC00654-201ENST00000379053 PLA2G2DQ9UNK4 145 aa7.08□□□□□ -1.28
LINC00654-201ENST00000379053 PCSK5Q92824 1860 aa7.08□□□□□ -1.28
LINC00654-201ENST00000379053 SPRR4Q96PI1 79 aa7.08□□□□□ -1.28
LINC00654-201ENST00000379053 Q8N377 158 aa7.07□□□□□ -1.28
LINC00654-201ENST00000379053 LINC01554Q52M75 96 aa7.07□□□□□ -1.28
LINC00654-201ENST00000379053 COA5Q86WW8 74 aa7.07□□□□□ -1.28
LINC00654-201ENST00000379053 KLKP1Q107X0 134 aa7.06□□□□□ -1.28
LINC00654-201ENST00000379053 IGLV7-46A0A075B6I9 117 aa7.04□□□□□ -1.28
LINC00654-201ENST00000379053 UQCR11O14957 56 aa7.03□□□□□ -1.28
LINC00654-201ENST00000379053 OXTP01178 125 aa7.02□□□□□ -1.29
LINC00654-201ENST00000379053 H7BZZ5 65 aa7.02□□□□□ -1.29
LINC00654-201ENST00000379053 FLNAP21333 2647 aaKnown RBP7.01□□□□□ -1.29
LINC00654-201ENST00000379053 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
LINC00654-201ENST00000379053 CRIPTQ9P021 101 aa7.01□□□□□ -1.29
LINC00654-201ENST00000379053 STAB1Q9NY15 2570 aa7□□□□□ -1.29
LINC00654-201ENST00000379053 SEC61BP60468 96 aaKnown RBP7□□□□□ -1.29
LINC00654-201ENST00000379053 KTN1-AS1Q86SY8 53 aa7□□□□□ -1.29
LINC00654-201ENST00000379053 ITPR3Q14573 2671 aa6.98□□□□□ -1.29
LINC00654-201ENST00000379053 PRR26Q8N8Z3 221 aa6.98□□□□□ -1.29
LINC00654-201ENST00000379053 Q5VSD8 79 aa6.98□□□□□ -1.29
LINC00654-201ENST00000379053 LCA10Q71F78 164 aa6.98□□□□□ -1.29
LINC00654-201ENST00000379053 IGLV5-48A0A075B6I7 105 aa6.98□□□□□ -1.29
LINC00654-201ENST00000379053 Q8N1X5 172 aa6.98□□□□□ -1.29
LINC00654-201ENST00000379053 SETXQ7Z333 2677 aaKnown RBP6.97□□□□□ -1.29
LINC00654-201ENST00000379053 MIR22HGQ0VDD5 57 aa6.97□□□□□ -1.29
LINC00654-201ENST00000379053 BPTFQ12830 3046 aa6.96□□□□□ -1.29
LINC00654-201ENST00000379053 WIPF1O43516 503 aa6.96□□□□□ -1.3
LINC00654-201ENST00000379053 A0A0D9SG42 100 aa6.95□□□□□ -1.3
LINC00654-201ENST00000379053 PRRC2CQ9Y520 2896 aaKnown RBP6.94□□□□□ -1.3
LINC00654-201ENST00000379053 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
LINC00654-201ENST00000379053 A0A1W2PNM2 257 aa6.92□□□□□ -1.3
LINC00654-201ENST00000379053 CFAP46Q8IYW2 2715 aa6.91□□□□□ -1.3
LINC00654-201ENST00000379053 FAM104AQ969W3 186 aa6.91□□□□□ -1.3
LINC00654-201ENST00000379053 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
LINC00654-201ENST00000379053 FAM229BQ4G0N7 80 aa6.85□□□□□ -1.31
LINC00654-201ENST00000379053 CDC42SE1Q9NRR8 79 aa6.84□□□□□ -1.31
LINC00654-201ENST00000379053 TEP1Q99973 2627 aaKnown RBP6.83□□□□□ -1.32
LINC00654-201ENST00000379053 PLAC8Q9NZF1 115 aa6.82□□□□□ -1.32
LINC00654-201ENST00000379053 SPANXA2-OT1Q8N9U9 137 aa6.81□□□□□ -1.32
LINC00654-201ENST00000379053 GOLGB1Q14789 3259 aaKnown RBP6.8□□□□□ -1.32
LINC00654-201ENST00000379053 CENPEQ02224 2701 aa6.8□□□□□ -1.32
LINC00654-201ENST00000379053 HRES1P13985 223 aa6.77□□□□□ -1.33
LINC00654-201ENST00000379053 Q1T7F1 81 aa6.77□□□□□ -1.33
LINC00654-201ENST00000379053 H3BS24 57 aa6.77□□□□□ -1.33
LINC00654-201ENST00000379053 CSAG1Q6PB30 78 aa6.77□□□□□ -1.33
LINC00654-201ENST00000379053 OCR1Q9BZK8 76 aa6.74□□□□□ -1.33
LINC00654-201ENST00000379053 CR1P17927 2039 aa6.74□□□□□ -1.33
LINC00654-201ENST00000379053 ZCCHC13Q8WW36 166 aaKnown RBP6.74□□□□□ -1.33
LINC00654-201ENST00000379053 TEX15Q9BXT5 2789 aa6.73□□□□□ -1.33
LINC00654-201ENST00000379053 COL6A5A8TX70 2615 aa6.71□□□□□ -1.33
LINC00654-201ENST00000379053 FLG2Q5D862 2391 aaPredicted RBP6.71□□□□□ -1.33
LINC00654-201ENST00000379053 S4R3F8 94 aa6.71□□□□□ -1.34
LINC00654-201ENST00000379053 BAHCC1Q9P281 2608 aa6.7□□□□□ -1.34
LINC00654-201ENST00000379053 LUZP6Q538Z0 58 aa6.7□□□□□ -1.34
LINC00654-201ENST00000379053 Q5XG85 94 aa6.7□□□□□ -1.34
LINC00654-201ENST00000379053 KRTAP10-1P60331 282 aa6.69□□□□□ -1.34
LINC00654-201ENST00000379053 CEP350Q5VT06 3117 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms