RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 SCGB1D1O95968 90 aa11.09□□□□□ -0.63
TMEM88B-201ENST00000378821 S100A12P80511 92 aa11.09□□□□□ -0.63
TMEM88B-201ENST00000378821 FAM229BQ4G0N7 80 aa11.09□□□□□ -0.63
TMEM88B-201ENST00000378821 ANAPC11Q9NYG5 84 aa11.09□□□□□ -0.63
TMEM88B-201ENST00000378821 PRR4Q16378 134 aa11.08□□□□□ -0.64
TMEM88B-201ENST00000378821 KRTAP13-2Q52LG2 175 aa11.08□□□□□ -0.64
TMEM88B-201ENST00000378821 TYMSOSQ8TAI1 123 aa11.08□□□□□ -0.64
TMEM88B-201ENST00000378821 TRAV23DV6A0A075B6W5 121 aa11.06□□□□□ -0.64
TMEM88B-201ENST00000378821 B5MCH6 92 aa11.05□□□□□ -0.64
TMEM88B-201ENST00000378821 SMCR5Q8TEV8 140 aa11.04□□□□□ -0.64
TMEM88B-201ENST00000378821 TSPAN13O95857 204 aa11.03□□□□□ -0.64
TMEM88B-201ENST00000378821 IFITM1P13164 125 aa11.03□□□□□ -0.64
TMEM88B-201ENST00000378821 Q6ZVH6 145 aa11.02□□□□□ -0.65
TMEM88B-201ENST00000378821 OR13C6PQ8NH95 151 aa11.02□□□□□ -0.65
TMEM88B-201ENST00000378821 SPRR4Q96PI1 79 aa11.02□□□□□ -0.65
TMEM88B-201ENST00000378821 PPDPFQ9H3Y8 114 aa11.02□□□□□ -0.65
TMEM88B-201ENST00000378821 ZNF73O43830 326 aaPredicted RBP11.01□□□□□ -0.65
TMEM88B-201ENST00000378821 CTAG1AP78358 180 aa11.01□□□□□ -0.65
TMEM88B-201ENST00000378821 Q6ZRX8 168 aa11.01□□□□□ -0.65
TMEM88B-201ENST00000378821 MUSTN1Q8IVN3 82 aa11.01□□□□□ -0.65
TMEM88B-201ENST00000378821 COPS9Q8WXC6 57 aa11.01□□□□□ -0.65
TMEM88B-201ENST00000378821 LINC00518Q8N0U6 118 aa11□□□□□ -0.65
TMEM88B-201ENST00000378821 Q9BRP9 147 aa11□□□□□ -0.65
TMEM88B-201ENST00000378821 ERC2-IT1O76042 136 aa10.98□□□□□ -0.65
TMEM88B-201ENST00000378821 CBY1Q9Y3M2 126 aa10.98□□□□□ -0.65
TMEM88B-201ENST00000378821 ZNF706Q9Y5V0 76 aaPredicted RBP10.98□□□□□ -0.65
TMEM88B-201ENST00000378821 COX8AP10176 69 aa10.96□□□□□ -0.65
TMEM88B-201ENST00000378821 LINC00304Q8N9R0 145 aa10.96□□□□□ -0.65
TMEM88B-201ENST00000378821 TMA7Q9Y2S6 64 aaKnown RBP10.96□□□□□ -0.65
TMEM88B-201ENST00000378821 JOSD1Q15040 202 aaPredicted RBP10.95□□□□□ -0.66
TMEM88B-201ENST00000378821 C3orf22Q8N5N4 141 aa10.95□□□□□ -0.66
TMEM88B-201ENST00000378821 PAM16Q9Y3D7 125 aa10.94□□□□□ -0.66
TMEM88B-201ENST00000378821 HINT1P49773 126 aaPredicted RBP10.92□□□□□ -0.66
TMEM88B-201ENST00000378821 SPATA45Q537H7 98 aa10.92□□□□□ -0.66
TMEM88B-201ENST00000378821 A6NDN8 102 aa10.91□□□□□ -0.66
TMEM88B-201ENST00000378821 C6orf99Q4VX62 202 aa10.91□□□□□ -0.66
TMEM88B-201ENST00000378821 LINC00483Q53H64 154 aa10.91□□□□□ -0.66
TMEM88B-201ENST00000378821 VAMP8Q9BV40 100 aa10.91□□□□□ -0.66
TMEM88B-201ENST00000378821 MUC2Q02817 5179 aa10.91□□□□□ -0.66
TMEM88B-201ENST00000378821 DLEU1O43261 78 aa10.9□□□□□ -0.66
TMEM88B-201ENST00000378821 GAGE2AQ6NT46 116 aa10.9□□□□□ -0.66
TMEM88B-201ENST00000378821 C14orf144Q96I85 54 aa10.9□□□□□ -0.66
TMEM88B-201ENST00000378821 A4D1N5 150 aa10.88□□□□□ -0.67
TMEM88B-201ENST00000378821 COX7BP24311 80 aa10.88□□□□□ -0.67
TMEM88B-201ENST00000378821 ELOF1P60002 83 aaKnown RBP10.88□□□□□ -0.67
TMEM88B-201ENST00000378821 TRAV13-2A0A0B4J235 113 aa10.87□□□□□ -0.67
TMEM88B-201ENST00000378821 RETNLBQ9BQ08 111 aa10.87□□□□□ -0.67
TMEM88B-201ENST00000378821 TPRXLQ17RH7 258 aa10.86□□□□□ -0.67
TMEM88B-201ENST00000378821 PYY3Q5JQD4 70 aa10.86□□□□□ -0.67
TMEM88B-201ENST00000378821 ST20-AS1Q8NBB2 130 aa10.86□□□□□ -0.67
TMEM88B-201ENST00000378821 HIST1H4GQ99525 98 aa10.86□□□□□ -0.67
TMEM88B-201ENST00000378821 SPAG11AQ6PDA7 123 aa10.85□□□□□ -0.67
TMEM88B-201ENST00000378821 DHRS4-AS1Q9P1J3 65 aa10.85□□□□□ -0.67
TMEM88B-201ENST00000378821 TRBV7-6A0A0J9YX20 115 aa10.83□□□□□ -0.68
TMEM88B-201ENST00000378821 SLC25A34Q6PIV7 304 aa10.83□□□□□ -0.68
TMEM88B-201ENST00000378821 C2orf91Q6ZV80 131 aa10.83□□□□□ -0.68
TMEM88B-201ENST00000378821 SMIM11BQ8TCY0 68 aa10.83□□□□□ -0.68
TMEM88B-201ENST00000378821 A0A1B0GWB2 263 aa10.82□□□□□ -0.68
TMEM88B-201ENST00000378821 C12orf57Q99622 126 aa10.82□□□□□ -0.68
TMEM88B-201ENST00000378821 HIGD1BQ9P298 99 aa10.82□□□□□ -0.68
TMEM88B-201ENST00000378821 IGLV9-49A0A0B4J1Y8 123 aa10.81□□□□□ -0.68
TMEM88B-201ENST00000378821 Q8NBF4 154 aa10.81□□□□□ -0.68
TMEM88B-201ENST00000378821 IGLV7-46A0A075B6I9 117 aa10.8□□□□□ -0.68
TMEM88B-201ENST00000378821 MOBPQ13875 183 aa10.8□□□□□ -0.68
TMEM88B-201ENST00000378821 A0A0U1RQV1 116 aa10.78□□□□□ -0.68
TMEM88B-201ENST00000378821 SPRR1BP22528 89 aa10.77□□□□□ -0.69
TMEM88B-201ENST00000378821 FP248Q71RG6 208 aaPredicted RBP10.75□□□□□ -0.69
TMEM88B-201ENST00000378821 CDIP1Q9H305 208 aa10.75□□□□□ -0.69
TMEM88B-201ENST00000378821 C9orf153Q5TBE3 101 aa10.74□□□□□ -0.69
TMEM88B-201ENST00000378821 CFC1BP0CG36 223 aa10.73□□□□□ -0.69
TMEM88B-201ENST00000378821 CFC1P0CG37 223 aa10.73□□□□□ -0.69
TMEM88B-201ENST00000378821 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
TMEM88B-201ENST00000378821 SSBP3-AS1Q7Z2R9 100 aa10.73□□□□□ -0.69
TMEM88B-201ENST00000378821 SPINK1P00995 79 aa10.72□□□□□ -0.69
TMEM88B-201ENST00000378821 TAL2Q16559 108 aa10.72□□□□□ -0.69
TMEM88B-201ENST00000378821 DEFB105AQ8NG35 78 aa10.72□□□□□ -0.69
TMEM88B-201ENST00000378821 CEND1Q8N111 149 aa10.71□□□□□ -0.69
TMEM88B-201ENST00000378821 LINC01547P58512 204 aaPredicted RBP10.7□□□□□ -0.7
TMEM88B-201ENST00000378821 VAMP3Q15836 100 aa10.7□□□□□ -0.7
TMEM88B-201ENST00000378821 LCE2AQ5TA79 106 aaPredicted RBP10.7□□□□□ -0.7
TMEM88B-201ENST00000378821 NHP2Q9NX24 153 aaKnown RBP10.7□□□□□ -0.7
TMEM88B-201ENST00000378821 IGLV5-48A0A075B6I7 105 aa10.69□□□□□ -0.7
TMEM88B-201ENST00000378821 A0A0B4J2C4 111 aa10.69□□□□□ -0.7
TMEM88B-201ENST00000378821 RAB37Q96AX2 223 aa10.69□□□□□ -0.7
TMEM88B-201ENST00000378821 MUC17Q685J3 4493 aa10.68□□□□□ -0.7
TMEM88B-201ENST00000378821 TEX49A0A1B0GTD5 131 aa10.68□□□□□ -0.7
TMEM88B-201ENST00000378821 H7C2G1 150 aa10.68□□□□□ -0.7
TMEM88B-201ENST00000378821 RPS29P62273 56 aaKnown RBP10.68□□□□□ -0.7
TMEM88B-201ENST00000378821 LINC00575Q6W349 94 aa10.68□□□□□ -0.7
TMEM88B-201ENST00000378821 LAMTOR3Q9UHA4 124 aa10.68□□□□□ -0.7
TMEM88B-201ENST00000378821 FXYD2P54710 66 aa10.67□□□□□ -0.7
TMEM88B-201ENST00000378821 Q1RN00 199 aa10.67□□□□□ -0.7
TMEM88B-201ENST00000378821 SLC25A20O43772 301 aa10.66□□□□□ -0.7
TMEM88B-201ENST00000378821 KRTAP13-3Q3SY46 172 aa10.66□□□□□ -0.7
TMEM88B-201ENST00000378821 SMIM29Q86T20 159 aa10.66□□□□□ -0.7
TMEM88B-201ENST00000378821 TMEM238LA0A1B0GVL6 79 aa10.64□□□□□ -0.71
TMEM88B-201ENST00000378821 A6NJY4 79 aa10.64□□□□□ -0.71
TMEM88B-201ENST00000378821 HSD52Q0P140 79 aa10.64□□□□□ -0.71
TMEM88B-201ENST00000378821 BVES-AS1Q5T3Y7 98 aa10.64□□□□□ -0.71
TMEM88B-201ENST00000378821 Q8N377 158 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms