RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 Q8NAQ8 132 aa5.41□□□□□ -1.54
PTPRR-203ENST00000378778 NOTCH3Q9UM47 2321 aa5.4□□□□□ -1.54
PTPRR-203ENST00000378778 DNHD1Q96M86 4753 aa5.4□□□□□ -1.54
PTPRR-203ENST00000378778 TLX1NBP0CAT3 122 aa5.4□□□□□ -1.54
PTPRR-203ENST00000378778 Q8NBF4 154 aa5.4□□□□□ -1.54
PTPRR-203ENST00000378778 HIGD2AQ9BW72 106 aa5.4□□□□□ -1.54
PTPRR-203ENST00000378778 FAM229BQ4G0N7 80 aa5.4□□□□□ -1.55
PTPRR-203ENST00000378778 KRTAP26-1Q6PEX3 210 aa5.4□□□□□ -1.55
PTPRR-203ENST00000378778 PKIGQ9Y2B9 76 aa5.4□□□□□ -1.55
PTPRR-203ENST00000378778 CRYBG3Q68DQ2 2970 aa5.4□□□□□ -1.55
PTPRR-203ENST00000378778 CELSR2Q9HCU4 2923 aa5.39□□□□□ -1.55
PTPRR-203ENST00000378778 Q6ZRU5 148 aa5.39□□□□□ -1.55
PTPRR-203ENST00000378778 Q8N377 158 aa5.39□□□□□ -1.55
PTPRR-203ENST00000378778 H3BPC8 53 aa5.39□□□□□ -1.55
PTPRR-203ENST00000378778 NKAPP1Q8N9T2 125 aa5.39□□□□□ -1.55
PTPRR-203ENST00000378778 MPLKIPQ8TAP9 179 aa5.38□□□□□ -1.55
PTPRR-203ENST00000378778 KRTAP10-9P60411 292 aa5.38□□□□□ -1.55
PTPRR-203ENST00000378778 SMIM29Q86T20 159 aa5.38□□□□□ -1.55
PTPRR-203ENST00000378778 SPG11Q96JI7 2443 aa5.38□□□□□ -1.55
PTPRR-203ENST00000378778 SPRR1AP35321 89 aa5.37□□□□□ -1.55
PTPRR-203ENST00000378778 Q6ZRX8 168 aa5.37□□□□□ -1.55
PTPRR-203ENST00000378778 C15orf56Q8N910 161 aa5.37□□□□□ -1.55
PTPRR-203ENST00000378778 Q8N9L7 120 aa5.37□□□□□ -1.55
PTPRR-203ENST00000378778 WNK1Q9H4A3 2382 aa5.37□□□□□ -1.55
PTPRR-203ENST00000378778 MAP1AP78559 2803 aaPredicted RBP5.37□□□□□ -1.55
PTPRR-203ENST00000378778 DEFB135Q30KP9 77 aa5.37□□□□□ -1.55
PTPRR-203ENST00000378778 C1orf137Q5JT78 98 aa5.37□□□□□ -1.55
PTPRR-203ENST00000378778 NF1P21359 2839 aa5.36□□□□□ -1.55
PTPRR-203ENST00000378778 F8P00451 2351 aa5.36□□□□□ -1.55
PTPRR-203ENST00000378778 SYCNQ0VAF6 134 aa5.36□□□□□ -1.55
PTPRR-203ENST00000378778 FBN3Q75N90 2809 aa5.36□□□□□ -1.55
PTPRR-203ENST00000378778 MXRA5Q9NR99 2828 aa5.36□□□□□ -1.55
PTPRR-203ENST00000378778 SVEP1Q4LDE5 3571 aa5.36□□□□□ -1.55
PTPRR-203ENST00000378778 A0A1W2PNM2 257 aa5.36□□□□□ -1.55
PTPRR-203ENST00000378778 C3orf84H3BNL1 204 aa5.36□□□□□ -1.55
PTPRR-203ENST00000378778 SPANXA2-OT1Q8N9U9 137 aa5.36□□□□□ -1.55
PTPRR-203ENST00000378778 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
PTPRR-203ENST00000378778 MTORP42345 2549 aa5.35□□□□□ -1.55
PTPRR-203ENST00000378778 KRTAP4-16G5E9R7 235 aaPredicted RBP5.35□□□□□ -1.55
PTPRR-203ENST00000378778 KRTAP1-1Q07627 177 aa5.35□□□□□ -1.55
PTPRR-203ENST00000378778 FAM30AQ9NZY2 134 aa5.35□□□□□ -1.55
PTPRR-203ENST00000378778 OTOGQ6ZRI0 2925 aa5.35□□□□□ -1.55
PTPRR-203ENST00000378778 HCG22E2RYF7 251 aa5.34□□□□□ -1.55
PTPRR-203ENST00000378778 SEC61GP60059 68 aa5.34□□□□□ -1.55
PTPRR-203ENST00000378778 C7orf33Q8WU49 177 aa5.34□□□□□ -1.55
PTPRR-203ENST00000378778 MP68P56378 58 aa5.34□□□□□ -1.55
PTPRR-203ENST00000378778 LINC01556Q5JQF7 62 aa5.34□□□□□ -1.55
PTPRR-203ENST00000378778 Q6ZRP5 223 aa5.34□□□□□ -1.55
PTPRR-203ENST00000378778 DSCR10P59022 87 aa5.33□□□□□ -1.56
PTPRR-203ENST00000378778 RPL37AP8A6NKH3 93 aa5.33□□□□□ -1.56
PTPRR-203ENST00000378778 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
PTPRR-203ENST00000378778 IGLV1-50A0A075B6I6 118 aa5.32□□□□□ -1.56
PTPRR-203ENST00000378778 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.32□□□□□ -1.56
PTPRR-203ENST00000378778 TLN2Q9Y4G6 2542 aa5.32□□□□□ -1.56
PTPRR-203ENST00000378778 AKAP9Q99996 3911 aa5.32□□□□□ -1.56
PTPRR-203ENST00000378778 VPS13CQ709C8 3753 aa5.32□□□□□ -1.56
PTPRR-203ENST00000378778 MRPL55Q7Z7F7 128 aaKnown RBP5.32□□□□□ -1.56
PTPRR-203ENST00000378778 IGLV8-61A0A075B6I0 122 aa5.31□□□□□ -1.56
PTPRR-203ENST00000378778 HTN3P15516 51 aa5.31□□□□□ -1.56
PTPRR-203ENST00000378778 PSCAO43653 123 aa5.31□□□□□ -1.56
PTPRR-203ENST00000378778 Q9BRP9 147 aa5.31□□□□□ -1.56
PTPRR-203ENST00000378778 LIMD2Q9BT23 127 aa5.31□□□□□ -1.56
PTPRR-203ENST00000378778 CSMD2Q7Z408 3487 aa5.31□□□□□ -1.56
PTPRR-203ENST00000378778 HIVEP1P15822 2718 aa5.3□□□□□ -1.56
PTPRR-203ENST00000378778 DEFB4AO15263 64 aa5.3□□□□□ -1.56
PTPRR-203ENST00000378778 DEFB105AQ8NG35 78 aa5.3□□□□□ -1.56
PTPRR-203ENST00000378778 PDZD2O15018 2839 aa5.3□□□□□ -1.56
PTPRR-203ENST00000378778 TRAV22A0A0B4J277 110 aa5.3□□□□□ -1.56
PTPRR-203ENST00000378778 WFDC10BQ8IUB3 73 aa5.3□□□□□ -1.56
PTPRR-203ENST00000378778 KRTAP10-3P60369 221 aa5.29□□□□□ -1.56
PTPRR-203ENST00000378778 K7EQZ3 153 aa5.28□□□□□ -1.56
PTPRR-203ENST00000378778 UBE2BP63146 152 aa5.28□□□□□ -1.56
PTPRR-203ENST00000378778 KRTAP21-3Q3LHN1 58 aa5.28□□□□□ -1.56
PTPRR-203ENST00000378778 B9D2Q9BPU9 175 aa5.28□□□□□ -1.56
PTPRR-203ENST00000378778 LINC00588Q9Y4M8 146 aa5.28□□□□□ -1.56
PTPRR-203ENST00000378778 DNAH10OSP0CZ25 163 aa5.27□□□□□ -1.57
PTPRR-203ENST00000378778 UBE2AP49459 152 aa5.27□□□□□ -1.57
PTPRR-203ENST00000378778 NIPBLQ6KC79 2804 aaeCLIP5.27□□□□□ -1.57
PTPRR-203ENST00000378778 ZANQ9Y493 2812 aa5.27□□□□□ -1.57
PTPRR-203ENST00000378778 IGKV2D-24A0A075B6R9 120 aa5.27□□□□□ -1.57
PTPRR-203ENST00000378778 JMJD1CQ15652 2540 aa5.26□□□□□ -1.57
PTPRR-203ENST00000378778 APCP25054 2843 aa5.25□□□□□ -1.57
PTPRR-203ENST00000378778 KRTAP29-1A8MX34 341 aaPredicted RBP5.25□□□□□ -1.57
PTPRR-203ENST00000378778 LINC00476Q8WZB0 136 aa5.25□□□□□ -1.57
PTPRR-203ENST00000378778 CCDC168Q8NDH2 2452 aa5.25□□□□□ -1.57
PTPRR-203ENST00000378778 CD164Q04900 197 aa5.25□□□□□ -1.57
PTPRR-203ENST00000378778 REG3GQ6UW15 175 aa5.25□□□□□ -1.57
PTPRR-203ENST00000378778 ST20-AS1Q8NBB2 130 aa5.24□□□□□ -1.57
PTPRR-203ENST00000378778 LINC00208Q96KT6 92 aa5.24□□□□□ -1.57
PTPRR-203ENST00000378778 IGFL1Q6UW32 110 aa5.23□□□□□ -1.57
PTPRR-203ENST00000378778 LOC101927531A0A1B0GV80 90 aa5.22□□□□□ -1.57
PTPRR-203ENST00000378778 Q5VV11 94 aa5.22□□□□□ -1.57
PTPRR-203ENST00000378778 H0Y9P7 68 aa5.22□□□□□ -1.57
PTPRR-203ENST00000378778 PSPHP1O15172 72 aa5.22□□□□□ -1.57
PTPRR-203ENST00000378778 SPRR1BP22528 89 aa5.22□□□□□ -1.57
PTPRR-203ENST00000378778 Q75L30 129 aa5.22□□□□□ -1.57
PTPRR-203ENST00000378778 Q8N9P0 234 aaPredicted RBP5.22□□□□□ -1.57
PTPRR-203ENST00000378778 H0Y9J4 135 aa5.21□□□□□ -1.58
PTPRR-203ENST00000378778 ATP11AUNQ6ZP68 121 aa5.21□□□□□ -1.58
PTPRR-203ENST00000378778 A8MUN3 132 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms