RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 LINC00304Q8N9R0 145 aa7.96□□□□□ -1.14
PCDHA9-201ENST00000378122 IGLV1-50A0A075B6I6 118 aa7.96□□□□□ -1.14
PCDHA9-201ENST00000378122 A0A0G2JQZ4 141 aa7.95□□□□□ -1.14
PCDHA9-201ENST00000378122 A0A1W2PNN7 141 aa7.95□□□□□ -1.14
PCDHA9-201ENST00000378122 CYP4F30PQ9H0H9 118 aa7.95□□□□□ -1.14
PCDHA9-201ENST00000378122 USP9XQ93008 2570 aaPredicted RBP7.95□□□□□ -1.14
PCDHA9-201ENST00000378122 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
PCDHA9-201ENST00000378122 IGLV5-37A0A075B6J1 123 aa7.94□□□□□ -1.14
PCDHA9-201ENST00000378122 LOC101927531A0A1B0GV80 90 aa7.94□□□□□ -1.14
PCDHA9-201ENST00000378122 H7BZZ5 65 aa7.94□□□□□ -1.14
PCDHA9-201ENST00000378122 C9orf129Q5T035 196 aaKnown RBP7.94□□□□□ -1.14
PCDHA9-201ENST00000378122 MTORP42345 2549 aa7.93□□□□□ -1.14
PCDHA9-201ENST00000378122 CSNK1G2-AS1Q8NCQ2 148 aa7.93□□□□□ -1.14
PCDHA9-201ENST00000378122 KRTAP10-3P60369 221 aa7.92□□□□□ -1.14
PCDHA9-201ENST00000378122 IGFL1Q6UW32 110 aa7.92□□□□□ -1.14
PCDHA9-201ENST00000378122 MRPL34Q9BQ48 92 aaKnown RBP7.92□□□□□ -1.14
PCDHA9-201ENST00000378122 ANKRD17O75179 2603 aaKnown RBP7.92□□□□□ -1.14
PCDHA9-201ENST00000378122 ZNF575Q86XF7 245 aa7.92□□□□□ -1.14
PCDHA9-201ENST00000378122 XIRP2A4UGR9 3374 aa7.92□□□□□ -1.14
PCDHA9-201ENST00000378122 KCNQ1DNQ9H478 68 aa7.91□□□□□ -1.14
PCDHA9-201ENST00000378122 ANKRD11Q6UB99 2663 aaPredicted RBP7.9□□□□□ -1.14
PCDHA9-201ENST00000378122 CASC10Q5T4H9 136 aa7.9□□□□□ -1.14
PCDHA9-201ENST00000378122 LINC01600Q96MT4 127 aa7.89□□□□□ -1.15
PCDHA9-201ENST00000378122 C15orf56Q8N910 161 aa7.89□□□□□ -1.15
PCDHA9-201ENST00000378122 Q8N377 158 aa7.87□□□□□ -1.15
PCDHA9-201ENST00000378122 A0A087WTM6 91 aa7.87□□□□□ -1.15
PCDHA9-201ENST00000378122 MIR22HGQ0VDD5 57 aa7.86□□□□□ -1.15
PCDHA9-201ENST00000378122 UQCR11O14957 56 aa7.85□□□□□ -1.15
PCDHA9-201ENST00000378122 PRR15Q8IV56 129 aa7.85□□□□□ -1.15
PCDHA9-201ENST00000378122 CD164Q04900 197 aa7.85□□□□□ -1.15
PCDHA9-201ENST00000378122 RBM12B-AS1Q9P1G2 102 aa7.85□□□□□ -1.15
PCDHA9-201ENST00000378122 C8orf17Q9NRJ1 99 aa7.85□□□□□ -1.15
PCDHA9-201ENST00000378122 KTN1-AS1Q86SY8 53 aa7.85□□□□□ -1.15
PCDHA9-201ENST00000378122 GIG44P09565 113 aaPredicted RBP7.82□□□□□ -1.16
PCDHA9-201ENST00000378122 PRR34Q9NV39 138 aa7.81□□□□□ -1.16
PCDHA9-201ENST00000378122 PLA2G2DQ9UNK4 145 aa7.81□□□□□ -1.16
PCDHA9-201ENST00000378122 TNP2Q05952 138 aa7.8□□□□□ -1.16
PCDHA9-201ENST00000378122 PKD1L2Q7Z442 2459 aa7.8□□□□□ -1.16
PCDHA9-201ENST00000378122 USP24Q9UPU5 2620 aa7.8□□□□□ -1.16
PCDHA9-201ENST00000378122 A0A1B0GVX0 72 aa7.8□□□□□ -1.16
PCDHA9-201ENST00000378122 Q6ZSA8 131 aa7.78□□□□□ -1.16
PCDHA9-201ENST00000378122 Q8N1X5 172 aa7.78□□□□□ -1.16
PCDHA9-201ENST00000378122 LCA10Q71F78 164 aa7.77□□□□□ -1.17
PCDHA9-201ENST00000378122 C19orf73Q9NVV2 129 aa7.76□□□□□ -1.17
PCDHA9-201ENST00000378122 LINC00612Q8N6U2 182 aa7.74□□□□□ -1.17
PCDHA9-201ENST00000378122 TLX1NBP0CAT3 122 aa7.73□□□□□ -1.17
PCDHA9-201ENST00000378122 IGLV5-48A0A075B6I7 105 aa7.73□□□□□ -1.17
PCDHA9-201ENST00000378122 A0A1W2PNM2 257 aa7.73□□□□□ -1.17
PCDHA9-201ENST00000378122 CEP295Q9C0D2 2601 aa7.73□□□□□ -1.17
PCDHA9-201ENST00000378122 IGLV7-46A0A075B6I9 117 aa7.72□□□□□ -1.17
PCDHA9-201ENST00000378122 CDC42SE1Q9NRR8 79 aa7.72□□□□□ -1.17
PCDHA9-201ENST00000378122 SPANXA2-OT1Q8N9U9 137 aa7.71□□□□□ -1.17
PCDHA9-201ENST00000378122 FLNBO75369 2602 aaKnown RBP7.71□□□□□ -1.17
PCDHA9-201ENST00000378122 A0A096LNT2 108 aa7.71□□□□□ -1.18
PCDHA9-201ENST00000378122 ZNF861PO60384 105 aa7.71□□□□□ -1.18
PCDHA9-201ENST00000378122 CRIPTQ9P021 101 aa7.71□□□□□ -1.18
PCDHA9-201ENST00000378122 HECTD1Q9ULT8 2610 aa7.7□□□□□ -1.18
PCDHA9-201ENST00000378122 Q5VSD8 79 aa7.69□□□□□ -1.18
PCDHA9-201ENST00000378122 Q1T7F1 81 aa7.69□□□□□ -1.18
PCDHA9-201ENST00000378122 IGLV7-43P04211 117 aa7.68□□□□□ -1.18
PCDHA9-201ENST00000378122 OCR1Q9BZK8 76 aa7.67□□□□□ -1.18
PCDHA9-201ENST00000378122 PRR26Q8N8Z3 221 aa7.66□□□□□ -1.18
PCDHA9-201ENST00000378122 PSORS1C2Q9UIG4 136 aa7.66□□□□□ -1.18
PCDHA9-201ENST00000378122 WIPF1O43516 503 aa7.66□□□□□ -1.18
PCDHA9-201ENST00000378122 FAM229BQ4G0N7 80 aa7.66□□□□□ -1.18
PCDHA9-201ENST00000378122 MKI67P46013 3256 aaKnown RBP7.65□□□□□ -1.18
PCDHA9-201ENST00000378122 Q5XG85 94 aa7.65□□□□□ -1.19
PCDHA9-201ENST00000378122 SPRR4Q96PI1 79 aa7.64□□□□□ -1.19
PCDHA9-201ENST00000378122 CAMK2N1Q7Z7J9 78 aa7.64□□□□□ -1.19
PCDHA9-201ENST00000378122 KRTAP1-3Q8IUG1 177 aa7.64□□□□□ -1.19
PCDHA9-201ENST00000378122 CELSR3Q9NYQ7 3312 aa7.63□□□□□ -1.19
PCDHA9-201ENST00000378122 FAM104AQ969W3 186 aa7.62□□□□□ -1.19
PCDHA9-201ENST00000378122 PRRC2CQ9Y520 2896 aaKnown RBP7.62□□□□□ -1.19
PCDHA9-201ENST00000378122 C9orf163Q8N9P6 203 aa7.62□□□□□ -1.19
PCDHA9-201ENST00000378122 CYSTM1Q9H1C7 97 aa7.61□□□□□ -1.19
PCDHA9-201ENST00000378122 EPG5Q9HCE0 2579 aa7.61□□□□□ -1.19
PCDHA9-201ENST00000378122 USP9YO00507 2555 aaPredicted RBP7.6□□□□□ -1.19
PCDHA9-201ENST00000378122 KRTAP1-1Q07627 177 aa7.58□□□□□ -1.2
PCDHA9-201ENST00000378122 CNBPP62633 177 aaKnown RBP7.58□□□□□ -1.2
PCDHA9-201ENST00000378122 CR1P17927 2039 aa7.57□□□□□ -1.2
PCDHA9-201ENST00000378122 MGAM2Q2M2H8 2515 aa7.56□□□□□ -1.2
PCDHA9-201ENST00000378122 BRCA2P51587 3418 aa7.56□□□□□ -1.2
PCDHA9-201ENST00000378122 Q75L30 129 aa7.56□□□□□ -1.2
PCDHA9-201ENST00000378122 CFAP54Q96N23 3096 aa7.54□□□□□ -1.2
PCDHA9-201ENST00000378122 FP248Q71RG6 208 aaPredicted RBP7.53□□□□□ -1.2
PCDHA9-201ENST00000378122 LCE6AA0A183 80 aa7.52□□□□□ -1.21
PCDHA9-201ENST00000378122 LAMA3Q16787 3333 aa7.52□□□□□ -1.21
PCDHA9-201ENST00000378122 LAMA2P24043 3122 aaKnown RBP7.51□□□□□ -1.21
PCDHA9-201ENST00000378122 FLG2Q5D862 2391 aaPredicted RBP7.5□□□□□ -1.21
PCDHA9-201ENST00000378122 FREM2Q5SZK8 3169 aa7.5□□□□□ -1.21
PCDHA9-201ENST00000378122 PRUNE2Q8WUY3 3088 aa7.49□□□□□ -1.21
PCDHA9-201ENST00000378122 Q8NDZ9 215 aa7.49□□□□□ -1.21
PCDHA9-201ENST00000378122 HRES1P13985 223 aa7.46□□□□□ -1.21
PCDHA9-201ENST00000378122 PRAC1Q96KF2 57 aa7.46□□□□□ -1.22
PCDHA9-201ENST00000378122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.45□□□□□ -1.22
PCDHA9-201ENST00000378122 Q8N9P0 234 aaPredicted RBP7.45□□□□□ -1.22
PCDHA9-201ENST00000378122 LINC01558Q9Y6Z2 57 aa7.45□□□□□ -1.22
PCDHA9-201ENST00000378122 Q5VV11 94 aa7.44□□□□□ -1.22
PCDHA9-201ENST00000378122 CDH23Q9H251 3354 aa7.44□□□□□ -1.22
PCDHA9-201ENST00000378122 OXTP01178 125 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms