RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 C22orf24Q9Y442 160 aa5.35□□□□□ -1.55
CKAP2-203ENST00000378037 RPL28P46779 137 aaKnown RBP5.35□□□□□ -1.55
CKAP2-203ENST00000378037 LINC00612Q8N6U2 182 aa5.35□□□□□ -1.55
CKAP2-203ENST00000378037 EGFEM1PQ0D2K5 195 aa5.35□□□□□ -1.55
CKAP2-203ENST00000378037 LINC00167Q96N53 147 aa5.35□□□□□ -1.55
CKAP2-203ENST00000378037 LINC00846Q9NV44 126 aa5.34□□□□□ -1.55
CKAP2-203ENST00000378037 TMEM256-PLSCR3K7ERE1 68 aa5.34□□□□□ -1.55
CKAP2-203ENST00000378037 M0R378 163 aa5.34□□□□□ -1.56
CKAP2-203ENST00000378037 A0A1B0GX51 115 aa5.33□□□□□ -1.56
CKAP2-203ENST00000378037 NREPQ16612 68 aa5.33□□□□□ -1.56
CKAP2-203ENST00000378037 MEGF8Q7Z7M0 2845 aa5.33□□□□□ -1.56
CKAP2-203ENST00000378037 PRR4Q16378 134 aa5.32□□□□□ -1.56
CKAP2-203ENST00000378037 MRPL55Q7Z7F7 128 aaKnown RBP5.32□□□□□ -1.56
CKAP2-203ENST00000378037 TM2D3Q9BRN9 247 aa5.32□□□□□ -1.56
CKAP2-203ENST00000378037 UPK3BQ9BT76 320 aa5.31□□□□□ -1.56
CKAP2-203ENST00000378037 PRR34Q9NV39 138 aa5.31□□□□□ -1.56
CKAP2-203ENST00000378037 NDUFS5O43920 106 aa5.31□□□□□ -1.56
CKAP2-203ENST00000378037 IGLV5-52A0A0A0MRZ9 124 aa5.3□□□□□ -1.56
CKAP2-203ENST00000378037 H0Y9J4 135 aa5.3□□□□□ -1.56
CKAP2-203ENST00000378037 WFDC13Q8IUB5 93 aa5.3□□□□□ -1.56
CKAP2-203ENST00000378037 B9D2Q9BPU9 175 aa5.3□□□□□ -1.56
CKAP2-203ENST00000378037 NUPR2A6NF83 97 aa5.3□□□□□ -1.56
CKAP2-203ENST00000378037 NDUFV3P56181 108 aaKnown RBP5.3□□□□□ -1.56
CKAP2-203ENST00000378037 COX17Q14061 63 aa5.3□□□□□ -1.56
CKAP2-203ENST00000378037 NBDYA0A0U1RRE5 68 aa5.29□□□□□ -1.56
CKAP2-203ENST00000378037 LINC00575Q6W349 94 aa5.29□□□□□ -1.56
CKAP2-203ENST00000378037 SMR3BP02814 79 aaPredicted RBP5.29□□□□□ -1.56
CKAP2-203ENST00000378037 C1orf137Q5JT78 98 aa5.29□□□□□ -1.56
CKAP2-203ENST00000378037 ERC2-IT1O76042 136 aa5.28□□□□□ -1.56
CKAP2-203ENST00000378037 VPREB1P12018 145 aa5.28□□□□□ -1.56
CKAP2-203ENST00000378037 SNURFQ9Y675 71 aa5.28□□□□□ -1.56
CKAP2-203ENST00000378037 LCE2DQ5TA82 110 aaPredicted RBP5.28□□□□□ -1.56
CKAP2-203ENST00000378037 C1orf134Q5TEV5 83 aa5.28□□□□□ -1.56
CKAP2-203ENST00000378037 F8WDY8 70 aa5.27□□□□□ -1.57
CKAP2-203ENST00000378037 JMJD7-PLA2G4BH0Y9G9 81 aa5.27□□□□□ -1.57
CKAP2-203ENST00000378037 REG3GQ6UW15 175 aa5.27□□□□□ -1.57
CKAP2-203ENST00000378037 C20orf197Q8N268 126 aa5.27□□□□□ -1.57
CKAP2-203ENST00000378037 SMCR5Q8TEV8 140 aa5.27□□□□□ -1.57
CKAP2-203ENST00000378037 A0A087WSZ3 146 aa5.27□□□□□ -1.57
CKAP2-203ENST00000378037 MUC7Q8TAX7 377 aa5.27□□□□□ -1.57
CKAP2-203ENST00000378037 FAM30AQ9NZY2 134 aa5.27□□□□□ -1.57
CKAP2-203ENST00000378037 RETNLBQ9BQ08 111 aa5.26□□□□□ -1.57
CKAP2-203ENST00000378037 BPY2O14599 106 aa5.26□□□□□ -1.57
CKAP2-203ENST00000378037 GHRHP01286 108 aa5.26□□□□□ -1.57
CKAP2-203ENST00000378037 CIRBP-AS1Q8TBR5 109 aa5.25□□□□□ -1.57
CKAP2-203ENST00000378037 DNHD1Q96M86 4753 aa5.24□□□□□ -1.57
CKAP2-203ENST00000378037 C4orf26Q17RF5 130 aa5.24□□□□□ -1.57
CKAP2-203ENST00000378037 LINC00643Q86TS7 51 aa5.24□□□□□ -1.57
CKAP2-203ENST00000378037 C2orf48Q96LS8 159 aa5.23□□□□□ -1.57
CKAP2-203ENST00000378037 APLNQ9ULZ1 77 aa5.23□□□□□ -1.57
CKAP2-203ENST00000378037 RTL8CO15255 209 aa5.23□□□□□ -1.57
CKAP2-203ENST00000378037 RPL37AP61513 92 aaKnown RBP5.23□□□□□ -1.57
CKAP2-203ENST00000378037 TNP2Q05952 138 aa5.23□□□□□ -1.57
CKAP2-203ENST00000378037 PANO1I0J062 215 aa5.23□□□□□ -1.57
CKAP2-203ENST00000378037 CDK2AP2O75956 126 aa5.23□□□□□ -1.57
CKAP2-203ENST00000378037 NDUFC2O95298 119 aa5.23□□□□□ -1.57
CKAP2-203ENST00000378037 Q9BRP9 147 aa5.23□□□□□ -1.57
CKAP2-203ENST00000378037 GVQW2A0A096LPI5 108 aaPredicted RBP5.22□□□□□ -1.57
CKAP2-203ENST00000378037 C14orf177Q52M58 125 aa5.22□□□□□ -1.57
CKAP2-203ENST00000378037 FAM19A3Q7Z5A8 133 aa5.22□□□□□ -1.57
CKAP2-203ENST00000378037 EPM2AB3EWF7 344 aa5.22□□□□□ -1.57
CKAP2-203ENST00000378037 H3BNG1 76 aa5.22□□□□□ -1.57
CKAP2-203ENST00000378037 OXTP01178 125 aa5.21□□□□□ -1.57
CKAP2-203ENST00000378037 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.21□□□□□ -1.57
CKAP2-203ENST00000378037 SEC61GP60059 68 aa5.21□□□□□ -1.58
CKAP2-203ENST00000378037 Q6ZVQ6 151 aa5.21□□□□□ -1.58
CKAP2-203ENST00000378037 IGLV6-57P01721 117 aa5.2□□□□□ -1.58
CKAP2-203ENST00000378037 ACYP1P07311 99 aa5.19□□□□□ -1.58
CKAP2-203ENST00000378037 MOBPQ13875 183 aa5.19□□□□□ -1.58
CKAP2-203ENST00000378037 Q6JHZ5 121 aa5.19□□□□□ -1.58
CKAP2-203ENST00000378037 ELOF1P60002 83 aaKnown RBP5.18□□□□□ -1.58
CKAP2-203ENST00000378037 Q6ZRX8 168 aa5.18□□□□□ -1.58
CKAP2-203ENST00000378037 CYSTM1Q9H1C7 97 aa5.18□□□□□ -1.58
CKAP2-203ENST00000378037 A0A087WTM6 91 aa5.17□□□□□ -1.58
CKAP2-203ENST00000378037 Q5XG85 94 aa5.17□□□□□ -1.58
CKAP2-203ENST00000378037 PKIGQ9Y2B9 76 aa5.17□□□□□ -1.58
CKAP2-203ENST00000378037 DYNC2H1Q8NCM8 4307 aaKnown RBP5.17□□□□□ -1.58
CKAP2-203ENST00000378037 DHRS4-AS1Q9P1J3 65 aa5.17□□□□□ -1.58
CKAP2-203ENST00000378037 LINC01547P58512 204 aaPredicted RBP5.16□□□□□ -1.58
CKAP2-203ENST00000378037 LINC01561Q8N1V8 128 aa5.16□□□□□ -1.58
CKAP2-203ENST00000378037 Q8N377 158 aa5.16□□□□□ -1.58
CKAP2-203ENST00000378037 DNAH6Q9C0G6 4158 aa5.16□□□□□ -1.58
CKAP2-203ENST00000378037 C16orf90A8MZG2 172 aa5.16□□□□□ -1.58
CKAP2-203ENST00000378037 KRTAP26-1Q6PEX3 210 aa5.16□□□□□ -1.58
CKAP2-203ENST00000378037 LINC00528Q8N1L1 170 aa5.16□□□□□ -1.58
CKAP2-203ENST00000378037 LINC00476Q8WZB0 136 aa5.16□□□□□ -1.58
CKAP2-203ENST00000378037 IGLV1-50A0A075B6I6 118 aa5.16□□□□□ -1.58
CKAP2-203ENST00000378037 IGHV6-1A0A0B4J1U7 121 aa5.15□□□□□ -1.59
CKAP2-203ENST00000378037 WWC2-AS2Q96NR7 200 aa5.15□□□□□ -1.59
CKAP2-203ENST00000378037 J3KT08 172 aa5.14□□□□□ -1.59
CKAP2-203ENST00000378037 Q6ZQT0 140 aa5.14□□□□□ -1.59
CKAP2-203ENST00000378037 KRTAP11-1Q8IUC1 163 aa5.14□□□□□ -1.59
CKAP2-203ENST00000378037 IGKV4-1P06312 121 aa5.12□□□□□ -1.59
CKAP2-203ENST00000378037 LINC00336Q6ZUF6 198 aa5.12□□□□□ -1.59
CKAP2-203ENST00000378037 SPACA4Q8TDM5 124 aa5.12□□□□□ -1.59
CKAP2-203ENST00000378037 KRTAP10-2P60368 255 aa5.12□□□□□ -1.59
CKAP2-203ENST00000378037 C9orf163Q8N9P6 203 aa5.12□□□□□ -1.59
CKAP2-203ENST00000378037 LYSTQ99698 3801 aa5.12□□□□□ -1.59
CKAP2-203ENST00000378037 ATOX1O00244 68 aa5.12□□□□□ -1.59
CKAP2-203ENST00000378037 PSORS1C2Q9UIG4 136 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms