RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 COX8AP10176 69 aa8.04□□□□□ -1.12
CKAP2-202ENST00000378034 UBE2AP49459 152 aa8.04□□□□□ -1.12
CKAP2-202ENST00000378034 HINT1P49773 126 aaPredicted RBP8.04□□□□□ -1.12
CKAP2-202ENST00000378034 MYCBP2O75592 4640 aa8.04□□□□□ -1.12
CKAP2-202ENST00000378034 J3QL48 77 aa8.03□□□□□ -1.12
CKAP2-202ENST00000378034 DLEU1O43261 78 aa8.03□□□□□ -1.12
CKAP2-202ENST00000378034 S100A7L2Q5SY68 101 aa8.03□□□□□ -1.12
CKAP2-202ENST00000378034 KRTAP13-1Q8IUC0 172 aa8.03□□□□□ -1.12
CKAP2-202ENST00000378034 IGLV6-57P01721 117 aa8.02□□□□□ -1.12
CKAP2-202ENST00000378034 LINC01600Q96MT4 127 aa8.02□□□□□ -1.12
CKAP2-202ENST00000378034 CBY1Q9Y3M2 126 aa8.02□□□□□ -1.12
CKAP2-202ENST00000378034 SPRR1AP35321 89 aa8.02□□□□□ -1.13
CKAP2-202ENST00000378034 FAM19A1Q7Z5A9 133 aa8.02□□□□□ -1.13
CKAP2-202ENST00000378034 LINC00337Q8N6G1 96 aa8.01□□□□□ -1.13
CKAP2-202ENST00000378034 MUSTN1Q8IVN3 82 aa8.01□□□□□ -1.13
CKAP2-202ENST00000378034 C2orf91Q6ZV80 131 aa7.99□□□□□ -1.13
CKAP2-202ENST00000378034 BVES-AS1Q5T3Y7 98 aa7.99□□□□□ -1.13
CKAP2-202ENST00000378034 TRAV23DV6A0A075B6W5 121 aa7.98□□□□□ -1.13
CKAP2-202ENST00000378034 ETDCA0A1B0GVM5 59 aa7.98□□□□□ -1.13
CKAP2-202ENST00000378034 KRTAP4-16G5E9R7 235 aaPredicted RBP7.98□□□□□ -1.13
CKAP2-202ENST00000378034 PRLHP81277 87 aa7.98□□□□□ -1.13
CKAP2-202ENST00000378034 OR13C6PQ8NH95 151 aa7.97□□□□□ -1.13
CKAP2-202ENST00000378034 DMBT1Q9UGM3 2413 aaPredicted RBP7.97□□□□□ -1.13
CKAP2-202ENST00000378034 LRP1Q07954 4544 aaKnown RBP7.97□□□□□ -1.13
CKAP2-202ENST00000378034 FAT3Q8TDW7 4589 aa7.96□□□□□ -1.13
CKAP2-202ENST00000378034 MT1HL1P0DM35 61 aa7.96□□□□□ -1.14
CKAP2-202ENST00000378034 HIGD1BQ9P298 99 aa7.96□□□□□ -1.14
CKAP2-202ENST00000378034 KRTAP1-4P0C5Y4 121 aa7.95□□□□□ -1.14
CKAP2-202ENST00000378034 ZNF73O43830 326 aaPredicted RBP7.95□□□□□ -1.14
CKAP2-202ENST00000378034 HIST1H4GQ99525 98 aa7.95□□□□□ -1.14
CKAP2-202ENST00000378034 B5MCH6 92 aa7.94□□□□□ -1.14
CKAP2-202ENST00000378034 KRTAP10-8P60410 259 aa7.94□□□□□ -1.14
CKAP2-202ENST00000378034 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
CKAP2-202ENST00000378034 HIGD2AQ9BW72 106 aa7.93□□□□□ -1.14
CKAP2-202ENST00000378034 TAX1BP3O14907 124 aa7.93□□□□□ -1.14
CKAP2-202ENST00000378034 Q6ZRX8 168 aa7.93□□□□□ -1.14
CKAP2-202ENST00000378034 HSD52Q0P140 79 aa7.92□□□□□ -1.14
CKAP2-202ENST00000378034 A4D1N5 150 aa7.91□□□□□ -1.14
CKAP2-202ENST00000378034 A6NDN8 102 aa7.91□□□□□ -1.14
CKAP2-202ENST00000378034 RPL13AP40429 203 aaKnown RBP7.91□□□□□ -1.14
CKAP2-202ENST00000378034 UBE2V1Q13404 147 aa7.91□□□□□ -1.14
CKAP2-202ENST00000378034 ZNF706Q9Y5V0 76 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-202ENST00000378034 TAL2Q16559 108 aa7.9□□□□□ -1.14
CKAP2-202ENST00000378034 FAM229BQ4G0N7 80 aa7.9□□□□□ -1.14
CKAP2-202ENST00000378034 SMCR5Q8TEV8 140 aa7.9□□□□□ -1.14
CKAP2-202ENST00000378034 PRR26Q8N8Z3 221 aa7.9□□□□□ -1.15
CKAP2-202ENST00000378034 TRBV7-6A0A0J9YX20 115 aa7.89□□□□□ -1.15
CKAP2-202ENST00000378034 CRYGAP11844 174 aa7.88□□□□□ -1.15
CKAP2-202ENST00000378034 C6orf99Q4VX62 202 aa7.88□□□□□ -1.15
CKAP2-202ENST00000378034 SPRR4Q96PI1 79 aa7.88□□□□□ -1.15
CKAP2-202ENST00000378034 Q9BRP9 147 aa7.88□□□□□ -1.15
CKAP2-202ENST00000378034 VAMP3Q15836 100 aa7.87□□□□□ -1.15
CKAP2-202ENST00000378034 COX7BP24311 80 aa7.86□□□□□ -1.15
CKAP2-202ENST00000378034 ELOF1P60002 83 aaKnown RBP7.86□□□□□ -1.15
CKAP2-202ENST00000378034 DHRS4-AS1Q9P1J3 65 aa7.86□□□□□ -1.15
CKAP2-202ENST00000378034 A0A1B0GWB2 263 aa7.85□□□□□ -1.15
CKAP2-202ENST00000378034 CEND1Q8N111 149 aa7.85□□□□□ -1.15
CKAP2-202ENST00000378034 A0A087X002 238 aa7.84□□□□□ -1.15
CKAP2-202ENST00000378034 SMIM11BQ8TCY0 68 aa7.84□□□□□ -1.15
CKAP2-202ENST00000378034 ANAPC11Q9NYG5 84 aa7.84□□□□□ -1.15
CKAP2-202ENST00000378034 ERC2-IT1O76042 136 aa7.84□□□□□ -1.15
CKAP2-202ENST00000378034 TMEM238LA0A1B0GVL6 79 aa7.83□□□□□ -1.16
CKAP2-202ENST00000378034 C9orf118A6NHY6 69 aa7.83□□□□□ -1.16
CKAP2-202ENST00000378034 A6NJY4 79 aa7.83□□□□□ -1.16
CKAP2-202ENST00000378034 LINC00483Q53H64 154 aa7.83□□□□□ -1.16
CKAP2-202ENST00000378034 TYMSOSQ8TAI1 123 aa7.82□□□□□ -1.16
CKAP2-202ENST00000378034 TNXBP22105 4242 aa7.82□□□□□ -1.16
CKAP2-202ENST00000378034 A0A0B4J2C4 111 aa7.82□□□□□ -1.16
CKAP2-202ENST00000378034 CFC1BP0CG36 223 aa7.82□□□□□ -1.16
CKAP2-202ENST00000378034 CFC1P0CG37 223 aa7.82□□□□□ -1.16
CKAP2-202ENST00000378034 RAB37Q96AX2 223 aa7.82□□□□□ -1.16
CKAP2-202ENST00000378034 KRTAP13-2Q52LG2 175 aa7.81□□□□□ -1.16
CKAP2-202ENST00000378034 FXYD2P54710 66 aa7.8□□□□□ -1.16
CKAP2-202ENST00000378034 GAGE2AQ6NT46 116 aa7.8□□□□□ -1.16
CKAP2-202ENST00000378034 NHP2Q9NX24 153 aaKnown RBP7.8□□□□□ -1.16
CKAP2-202ENST00000378034 HERC1Q15751 4861 aa7.8□□□□□ -1.16
CKAP2-202ENST00000378034 H3BUT2 72 aa7.79□□□□□ -1.16
CKAP2-202ENST00000378034 GTF2H5Q6ZYL4 71 aa7.78□□□□□ -1.16
CKAP2-202ENST00000378034 K7EP34 96 aa7.77□□□□□ -1.17
CKAP2-202ENST00000378034 A0A1W2PPM0 123 aa7.77□□□□□ -1.17
CKAP2-202ENST00000378034 SLC25A20O43772 301 aa7.77□□□□□ -1.17
CKAP2-202ENST00000378034 SPRR1BP22528 89 aa7.77□□□□□ -1.17
CKAP2-202ENST00000378034 ST20-AS1Q8NBB2 130 aa7.77□□□□□ -1.17
CKAP2-202ENST00000378034 PRO1854Q9UHT4 67 aa7.77□□□□□ -1.17
CKAP2-202ENST00000378034 C3orf22Q8N5N4 141 aa7.76□□□□□ -1.17
CKAP2-202ENST00000378034 H7C2G1 150 aa7.75□□□□□ -1.17
CKAP2-202ENST00000378034 LINC00575Q6W349 94 aa7.75□□□□□ -1.17
CKAP2-202ENST00000378034 K7ERJ3 54 aa7.74□□□□□ -1.17
CKAP2-202ENST00000378034 FABP2P12104 132 aa7.74□□□□□ -1.17
CKAP2-202ENST00000378034 NAA38Q9BRA0 125 aaKnown RBP7.74□□□□□ -1.17
CKAP2-202ENST00000378034 LINC00304Q8N9R0 145 aa7.73□□□□□ -1.17
CKAP2-202ENST00000378034 SPCS1Q9Y6A9 102 aa7.73□□□□□ -1.17
CKAP2-202ENST00000378034 TEX49A0A1B0GTD5 131 aa7.73□□□□□ -1.17
CKAP2-202ENST00000378034 Q1RN00 199 aa7.73□□□□□ -1.17
CKAP2-202ENST00000378034 SSBP3-AS1Q7Z2R9 100 aa7.73□□□□□ -1.17
CKAP2-202ENST00000378034 IGLV5-48A0A075B6I7 105 aa7.72□□□□□ -1.17
CKAP2-202ENST00000378034 hADV29S1A0JD25 119 aa7.72□□□□□ -1.17
CKAP2-202ENST00000378034 H0YGX0 51 aa7.72□□□□□ -1.17
CKAP2-202ENST00000378034 SPAG11AQ6PDA7 123 aa7.71□□□□□ -1.17
CKAP2-202ENST00000378034 LAMTOR3Q9UHA4 124 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms