RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 CAMK2N1Q7Z7J9 78 aa7.32□□□□□ -1.24
RTN3-206ENST00000377819 ELOF1P60002 83 aaKnown RBP7.32□□□□□ -1.24
RTN3-206ENST00000377819 IGLV5-39A0A0G2JS06 123 aa7.31□□□□□ -1.24
RTN3-206ENST00000377819 H3BNG1 76 aa7.31□□□□□ -1.24
RTN3-206ENST00000377819 Q6ZPA2 131 aa7.31□□□□□ -1.24
RTN3-206ENST00000377819 KIAA1549Q9HCM3 1950 aa7.31□□□□□ -1.24
RTN3-206ENST00000377819 Q6ZSN1 163 aa7.3□□□□□ -1.24
RTN3-206ENST00000377819 CHTF8P0CG12 524 aa7.3□□□□□ -1.24
RTN3-206ENST00000377819 KRTAP10-9P60411 292 aa7.3□□□□□ -1.24
RTN3-206ENST00000377819 MYO15AQ9UKN7 3530 aa7.29□□□□□ -1.24
RTN3-206ENST00000377819 TRIOO75962 3097 aa7.29□□□□□ -1.24
RTN3-206ENST00000377819 LINC00304Q8N9R0 145 aa7.29□□□□□ -1.24
RTN3-206ENST00000377819 TM2D3Q9BRN9 247 aa7.28□□□□□ -1.24
RTN3-206ENST00000377819 VCANP13611 3396 aa7.28□□□□□ -1.24
RTN3-206ENST00000377819 KTN1-AS1Q86SY8 53 aa7.28□□□□□ -1.24
RTN3-206ENST00000377819 EXPH5Q8NEV8 1989 aa7.28□□□□□ -1.24
RTN3-206ENST00000377819 PCDH15Q96QU1 1955 aa7.28□□□□□ -1.24
RTN3-206ENST00000377819 A0A0D9SG42 100 aa7.27□□□□□ -1.24
RTN3-206ENST00000377819 LCA10Q71F78 164 aa7.27□□□□□ -1.25
RTN3-206ENST00000377819 LOC110117498A0A087WWA1 95 aa7.27□□□□□ -1.25
RTN3-206ENST00000377819 TET2Q6N021 2002 aaPredicted RBP7.27□□□□□ -1.25
RTN3-206ENST00000377819 A0A0A0MQY5 61 aa7.26□□□□□ -1.25
RTN3-206ENST00000377819 CD164Q04900 197 aa7.26□□□□□ -1.25
RTN3-206ENST00000377819 COX8CQ7Z4L0 72 aa7.26□□□□□ -1.25
RTN3-206ENST00000377819 K7EQZ3 153 aa7.26□□□□□ -1.25
RTN3-206ENST00000377819 CEP295Q9C0D2 2601 aa7.25□□□□□ -1.25
RTN3-206ENST00000377819 URB1-AS1Q96HZ7 61 aa7.25□□□□□ -1.25
RTN3-206ENST00000377819 LAMA1P25391 3075 aa7.25□□□□□ -1.25
RTN3-206ENST00000377819 ERC2-IT1O76042 136 aa7.25□□□□□ -1.25
RTN3-206ENST00000377819 ZNF575Q86XF7 245 aa7.25□□□□□ -1.25
RTN3-206ENST00000377819 ANKRD11Q6UB99 2663 aaPredicted RBP7.24□□□□□ -1.25
RTN3-206ENST00000377819 C8orf17Q9NRJ1 99 aa7.24□□□□□ -1.25
RTN3-206ENST00000377819 BSNQ9UPA5 3926 aa7.23□□□□□ -1.25
RTN3-206ENST00000377819 CPAMD8Q8IZJ3 1885 aa7.23□□□□□ -1.25
RTN3-206ENST00000377819 OBSCN-AS1Q96MR7 158 aa7.23□□□□□ -1.25
RTN3-206ENST00000377819 Q1T7F1 81 aa7.21□□□□□ -1.26
RTN3-206ENST00000377819 STAB2Q8WWQ8 2551 aa7.21□□□□□ -1.26
RTN3-206ENST00000377819 DSCR10P59022 87 aa7.21□□□□□ -1.26
RTN3-206ENST00000377819 IGLV5-45A0A087WSX0 123 aa7.2□□□□□ -1.26
RTN3-206ENST00000377819 C9orf92A6NGG3 77 aa7.2□□□□□ -1.26
RTN3-206ENST00000377819 M0R2T5 61 aa7.2□□□□□ -1.26
RTN3-206ENST00000377819 FAM104AQ969W3 186 aa7.2□□□□□ -1.26
RTN3-206ENST00000377819 BAHCC1Q9P281 2608 aa7.2□□□□□ -1.26
RTN3-206ENST00000377819 A0A096LNJ9 63 aa7.2□□□□□ -1.26
RTN3-206ENST00000377819 LINC00310P59036 64 aa7.2□□□□□ -1.26
RTN3-206ENST00000377819 PRR15Q8IV56 129 aa7.18□□□□□ -1.26
RTN3-206ENST00000377819 GVQW2A0A096LPI5 108 aaPredicted RBP7.17□□□□□ -1.26
RTN3-206ENST00000377819 CRIP3Q6Q6R5 217 aa7.17□□□□□ -1.26
RTN3-206ENST00000377819 A0A1B0GVX0 72 aa7.17□□□□□ -1.26
RTN3-206ENST00000377819 COL6A3P12111 3177 aa7.17□□□□□ -1.26
RTN3-206ENST00000377819 ZFHX4Q86UP3 3567 aa7.17□□□□□ -1.26
RTN3-206ENST00000377819 LINC00588Q9Y4M8 146 aa7.16□□□□□ -1.26
RTN3-206ENST00000377819 ZNF861PO60384 105 aa7.16□□□□□ -1.26
RTN3-206ENST00000377819 FAM218AQ96MZ4 157 aa7.15□□□□□ -1.26
RTN3-206ENST00000377819 CDSNQ15517 529 aa7.15□□□□□ -1.27
RTN3-206ENST00000377819 Q6ZSA8 131 aa7.14□□□□□ -1.27
RTN3-206ENST00000377819 PCNX3Q9H6A9 2034 aa7.14□□□□□ -1.27
RTN3-206ENST00000377819 LINC00336Q6ZUF6 198 aa7.13□□□□□ -1.27
RTN3-206ENST00000377819 CFAP54Q96N23 3096 aa7.12□□□□□ -1.27
RTN3-206ENST00000377819 TLX1NBP0CAT3 122 aa7.12□□□□□ -1.27
RTN3-206ENST00000377819 PCSK5Q92824 1860 aa7.12□□□□□ -1.27
RTN3-206ENST00000377819 SPEGQ15772 3267 aa7.11□□□□□ -1.27
RTN3-206ENST00000377819 DNAH10OSP0CZ25 163 aa7.11□□□□□ -1.27
RTN3-206ENST00000377819 SMR3BP02814 79 aaPredicted RBP7.1□□□□□ -1.27
RTN3-206ENST00000377819 FRYLO94915 3013 aa7.09□□□□□ -1.27
RTN3-206ENST00000377819 IGFL1Q6UW32 110 aa7.09□□□□□ -1.27
RTN3-206ENST00000377819 Q8N1X5 172 aa7.08□□□□□ -1.28
RTN3-206ENST00000377819 KRTAP24-1Q3LI83 254 aa7.08□□□□□ -1.28
RTN3-206ENST00000377819 SMCPP49901 116 aaPredicted RBP7.08□□□□□ -1.28
RTN3-206ENST00000377819 KCNQ1DNQ9H478 68 aa7.08□□□□□ -1.28
RTN3-206ENST00000377819 IGLV1-50A0A075B6I6 118 aa7.07□□□□□ -1.28
RTN3-206ENST00000377819 VPS13AQ96RL7 3174 aa7.07□□□□□ -1.28
RTN3-206ENST00000377819 KLKP1Q107X0 134 aa7.06□□□□□ -1.28
RTN3-206ENST00000377819 A0A1W2PPR1 153 aa7.06□□□□□ -1.28
RTN3-206ENST00000377819 LINC00528Q8N1L1 170 aa7.04□□□□□ -1.28
RTN3-206ENST00000377819 Q8NAQ8 132 aa7.04□□□□□ -1.28
RTN3-206ENST00000377819 HRES1P13985 223 aa7.04□□□□□ -1.28
RTN3-206ENST00000377819 A0A1B0GU33 70 aa7.03□□□□□ -1.28
RTN3-206ENST00000377819 FAM168BA1KXE4 195 aa7.02□□□□□ -1.29
RTN3-206ENST00000377819 C15orf56Q8N910 161 aa7.02□□□□□ -1.29
RTN3-206ENST00000377819 CSAG1Q6PB30 78 aa7.02□□□□□ -1.29
RTN3-206ENST00000377819 C9orf163Q8N9P6 203 aa7.01□□□□□ -1.29
RTN3-206ENST00000377819 PRO0461Q9UI25 63 aa7.01□□□□□ -1.29
RTN3-206ENST00000377819 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
RTN3-206ENST00000377819 IGLV7-43P04211 117 aa7□□□□□ -1.29
RTN3-206ENST00000377819 WDFY4Q6ZS81 3184 aa7□□□□□ -1.29
RTN3-206ENST00000377819 A0A087WTM6 91 aa7□□□□□ -1.29
RTN3-206ENST00000377819 WIPF1O43516 503 aa6.99□□□□□ -1.29
RTN3-206ENST00000377819 IGLV7-46A0A075B6I9 117 aa6.98□□□□□ -1.29
RTN3-206ENST00000377819 SETXQ7Z333 2677 aaKnown RBP6.98□□□□□ -1.29
RTN3-206ENST00000377819 PRR26Q8N8Z3 221 aa6.97□□□□□ -1.29
RTN3-206ENST00000377819 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
RTN3-206ENST00000377819 FREM2Q5SZK8 3169 aa6.97□□□□□ -1.29
RTN3-206ENST00000377819 LINC01546A6NGU7 62 aa6.97□□□□□ -1.29
RTN3-206ENST00000377819 WDR87Q6ZQQ6 2873 aa6.96□□□□□ -1.29
RTN3-206ENST00000377819 COL6A5A8TX70 2615 aa6.96□□□□□ -1.29
RTN3-206ENST00000377819 Q8N377 158 aa6.96□□□□□ -1.3
RTN3-206ENST00000377819 DMAC1Q96GE9 116 aa6.96□□□□□ -1.3
RTN3-206ENST00000377819 SPINK7P58062 85 aa6.95□□□□□ -1.3
RTN3-206ENST00000377819 ANAPC11Q9NYG5 84 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms