RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 KRTAP13-2Q52LG2 175 aa12.99□□□□□ -0.33
SRM-201ENST00000376957 LINC00304Q8N9R0 145 aa12.99□□□□□ -0.33
SRM-201ENST00000376957 OR13C6PQ8NH95 151 aa12.99□□□□□ -0.33
SRM-201ENST00000376957 LITAFQ99732 161 aa12.99□□□□□ -0.33
SRM-201ENST00000376957 CTAG1AP78358 180 aa12.98□□□□□ -0.33
SRM-201ENST00000376957 PRR4Q16378 134 aa12.98□□□□□ -0.33
SRM-201ENST00000376957 ATOH7Q8N100 152 aa12.98□□□□□ -0.33
SRM-201ENST00000376957 HSBP1L1C9JCN9 74 aa12.97□□□□□ -0.33
SRM-201ENST00000376957 Q6ZRX8 168 aa12.97□□□□□ -0.33
SRM-201ENST00000376957 HIST3H2BBQ8N257 126 aa12.97□□□□□ -0.33
SRM-201ENST00000376957 ZNF73O43830 326 aaPredicted RBP12.96□□□□□ -0.33
SRM-201ENST00000376957 Q6ZVH6 145 aa12.96□□□□□ -0.33
SRM-201ENST00000376957 TTTY13Q9BZ97 58 aa12.96□□□□□ -0.33
SRM-201ENST00000376957 HIST1H2BLQ99880 126 aa12.95□□□□□ -0.34
SRM-201ENST00000376957 EIF4EBP3O60516 100 aaPredicted RBP12.94□□□□□ -0.34
SRM-201ENST00000376957 IFITM1P13164 125 aa12.94□□□□□ -0.34
SRM-201ENST00000376957 ANKRD39Q53RE8 183 aa12.94□□□□□ -0.34
SRM-201ENST00000376957 C4orf48Q5BLP8 95 aa12.94□□□□□ -0.34
SRM-201ENST00000376957 SPANXDQ9BXN6 97 aa12.94□□□□□ -0.34
SRM-201ENST00000376957 SPAG11AQ6PDA7 123 aa12.93□□□□□ -0.34
SRM-201ENST00000376957 GAGE2AQ6NT46 116 aa12.91□□□□□ -0.34
SRM-201ENST00000376957 PPDPFQ9H3Y8 114 aa12.9□□□□□ -0.34
SRM-201ENST00000376957 C3orf22Q8N5N4 141 aa12.88□□□□□ -0.35
SRM-201ENST00000376957 LINC00483Q53H64 154 aa12.87□□□□□ -0.35
SRM-201ENST00000376957 PCP2Q8IVA1 136 aa12.87□□□□□ -0.35
SRM-201ENST00000376957 Q9BRP9 147 aa12.87□□□□□ -0.35
SRM-201ENST00000376957 UBR4Q5T4S7 5183 aa12.87□□□□□ -0.35
SRM-201ENST00000376957 C5orf52A6NGY3 159 aa12.86□□□□□ -0.35
SRM-201ENST00000376957 DHRS4-AS1Q9P1J3 65 aa12.85□□□□□ -0.35
SRM-201ENST00000376957 ERC2-IT1O76042 136 aa12.84□□□□□ -0.35
SRM-201ENST00000376957 SCGB1D1O95968 90 aa12.83□□□□□ -0.36
SRM-201ENST00000376957 A6NDN8 102 aa12.82□□□□□ -0.36
SRM-201ENST00000376957 MUSTN1Q8IVN3 82 aa12.82□□□□□ -0.36
SRM-201ENST00000376957 IGLV9-49A0A0B4J1Y8 123 aa12.81□□□□□ -0.36
SRM-201ENST00000376957 SLC25A34Q6PIV7 304 aa12.81□□□□□ -0.36
SRM-201ENST00000376957 SSBP3-AS1Q7Z2R9 100 aa12.81□□□□□ -0.36
SRM-201ENST00000376957 Q8NBF4 154 aa12.81□□□□□ -0.36
SRM-201ENST00000376957 COX7BP24311 80 aa12.8□□□□□ -0.36
SRM-201ENST00000376957 LRP2P98164 4655 aa12.79□□□□□ -0.36
SRM-201ENST00000376957 TRAV13-2A0A0B4J235 113 aa12.79□□□□□ -0.36
SRM-201ENST00000376957 C6orf99Q4VX62 202 aa12.79□□□□□ -0.36
SRM-201ENST00000376957 SPINK1P00995 79 aa12.78□□□□□ -0.36
SRM-201ENST00000376957 TRBV7-6A0A0J9YX20 115 aa12.77□□□□□ -0.37
SRM-201ENST00000376957 MOBPQ13875 183 aa12.77□□□□□ -0.37
SRM-201ENST00000376957 ELOF1P60002 83 aaKnown RBP12.76□□□□□ -0.37
SRM-201ENST00000376957 C9orf153Q5TBE3 101 aa12.75□□□□□ -0.37
SRM-201ENST00000376957 RETNLBQ9BQ08 111 aa12.74□□□□□ -0.37
SRM-201ENST00000376957 A0A1B0GWB2 263 aa12.73□□□□□ -0.37
SRM-201ENST00000376957 A4D1N5 150 aa12.73□□□□□ -0.37
SRM-201ENST00000376957 ST20-AS1Q8NBB2 130 aa12.72□□□□□ -0.37
SRM-201ENST00000376957 TAL2Q16559 108 aa12.7□□□□□ -0.38
SRM-201ENST00000376957 NHP2Q9NX24 153 aaKnown RBP12.7□□□□□ -0.38
SRM-201ENST00000376957 LAMTOR3Q9UHA4 124 aa12.7□□□□□ -0.38
SRM-201ENST00000376957 IGLV7-46A0A075B6I9 117 aa12.69□□□□□ -0.38
SRM-201ENST00000376957 VAMP3Q15836 100 aa12.69□□□□□ -0.38
SRM-201ENST00000376957 RPS29P62273 56 aaKnown RBP12.68□□□□□ -0.38
SRM-201ENST00000376957 FP248Q71RG6 208 aaPredicted RBP12.68□□□□□ -0.38
SRM-201ENST00000376957 SPRR1BP22528 89 aa12.67□□□□□ -0.38
SRM-201ENST00000376957 COX8AP10176 69 aa12.66□□□□□ -0.38
SRM-201ENST00000376957 HIST1H4GQ99525 98 aa12.66□□□□□ -0.38
SRM-201ENST00000376957 SLC25A20O43772 301 aa12.65□□□□□ -0.38
SRM-201ENST00000376957 TEX49A0A1B0GTD5 131 aa12.64□□□□□ -0.39
SRM-201ENST00000376957 DEFB105AQ8NG35 78 aa12.64□□□□□ -0.39
SRM-201ENST00000376957 CDIP1Q9H305 208 aa12.64□□□□□ -0.39
SRM-201ENST00000376957 TPRXLQ17RH7 258 aa12.63□□□□□ -0.39
SRM-201ENST00000376957 SMIM11BQ8TCY0 68 aa12.63□□□□□ -0.39
SRM-201ENST00000376957 DLEU1O43261 78 aa12.62□□□□□ -0.39
SRM-201ENST00000376957 VAMP8Q9BV40 100 aa12.6□□□□□ -0.39
SRM-201ENST00000376957 LPAP08519 4548 aa12.58□□□□□ -0.39
SRM-201ENST00000376957 SPATA45Q537H7 98 aa12.58□□□□□ -0.4
SRM-201ENST00000376957 PAM16Q9Y3D7 125 aa12.58□□□□□ -0.4
SRM-201ENST00000376957 C14orf144Q96I85 54 aa12.56□□□□□ -0.4
SRM-201ENST00000376957 LIMD2Q9BT23 127 aa12.56□□□□□ -0.4
SRM-201ENST00000376957 Q1RN00 199 aa12.55□□□□□ -0.4
SRM-201ENST00000376957 PRO1933Q9H354 126 aa12.55□□□□□ -0.4
SRM-201ENST00000376957 Q8N377 158 aa12.54□□□□□ -0.4
SRM-201ENST00000376957 IGLV5-48A0A075B6I7 105 aa12.53□□□□□ -0.4
SRM-201ENST00000376957 BVES-AS1Q5T3Y7 98 aa12.53□□□□□ -0.4
SRM-201ENST00000376957 HIGD1BQ9P298 99 aa12.53□□□□□ -0.4
SRM-201ENST00000376957 RNF213Q63HN8 5207 aa12.53□□□□□ -0.4
SRM-201ENST00000376957 C12orf57Q99622 126 aa12.51□□□□□ -0.41
SRM-201ENST00000376957 hADV29S1A0JD25 119 aa12.5□□□□□ -0.41
SRM-201ENST00000376957 SNCGO76070 127 aa12.5□□□□□ -0.41
SRM-201ENST00000376957 LINC00575Q6W349 94 aa12.5□□□□□ -0.41
SRM-201ENST00000376957 RAB37Q96AX2 223 aa12.5□□□□□ -0.41
SRM-201ENST00000376957 F8WEM9 126 aa12.49□□□□□ -0.41
SRM-201ENST00000376957 CD164Q04900 197 aa12.49□□□□□ -0.41
SRM-201ENST00000376957 HRCT1Q6UXD1 115 aa12.48□□□□□ -0.41
SRM-201ENST00000376957 H7C2G1 150 aa12.47□□□□□ -0.41
SRM-201ENST00000376957 A0A0U1RQV1 116 aa12.46□□□□□ -0.41
SRM-201ENST00000376957 TMEM238LA0A1B0GVL6 79 aa12.46□□□□□ -0.41
SRM-201ENST00000376957 A6NJY4 79 aa12.46□□□□□ -0.41
SRM-201ENST00000376957 LINC01547P58512 204 aaPredicted RBP12.45□□□□□ -0.42
SRM-201ENST00000376957 SMIM29Q86T20 159 aa12.44□□□□□ -0.42
SRM-201ENST00000376957 CFC1BP0CG36 223 aa12.42□□□□□ -0.42
SRM-201ENST00000376957 CFC1P0CG37 223 aa12.42□□□□□ -0.42
SRM-201ENST00000376957 KRTAP13-3Q3SY46 172 aa12.42□□□□□ -0.42
SRM-201ENST00000376957 Q6ZQY7 126 aa12.42□□□□□ -0.42
SRM-201ENST00000376957 A0A0B4J2C4 111 aa12.41□□□□□ -0.42
SRM-201ENST00000376957 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms