RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 TAL2Q16559 108 aa6.9□□□□□ -1.3
HSPG2-202ENST00000374676 FAM19A1Q7Z5A9 133 aa6.9□□□□□ -1.3
HSPG2-202ENST00000374676 OR13C6PQ8NH95 151 aa6.9□□□□□ -1.3
HSPG2-202ENST00000374676 DMBT1Q9UGM3 2413 aaPredicted RBP6.9□□□□□ -1.31
HSPG2-202ENST00000374676 A4D1N5 150 aa6.89□□□□□ -1.31
HSPG2-202ENST00000374676 H0Y9J4 135 aa6.89□□□□□ -1.31
HSPG2-202ENST00000374676 UBE2AP49459 152 aa6.89□□□□□ -1.31
HSPG2-202ENST00000374676 UQCR10Q9UDW1 63 aa6.89□□□□□ -1.31
HSPG2-202ENST00000374676 TRAV23DV6A0A075B6W5 121 aa6.88□□□□□ -1.31
HSPG2-202ENST00000374676 TRAV13-2A0A0B4J235 113 aa6.88□□□□□ -1.31
HSPG2-202ENST00000374676 OXTP01178 125 aa6.88□□□□□ -1.31
HSPG2-202ENST00000374676 ETDCA0A1B0GVM5 59 aa6.87□□□□□ -1.31
HSPG2-202ENST00000374676 KRTAP29-1A8MX34 341 aaPredicted RBP6.87□□□□□ -1.31
HSPG2-202ENST00000374676 ZNF73O43830 326 aaPredicted RBP6.87□□□□□ -1.31
HSPG2-202ENST00000374676 A6NDN8 102 aa6.86□□□□□ -1.31
HSPG2-202ENST00000374676 B5MCH6 92 aa6.86□□□□□ -1.31
HSPG2-202ENST00000374676 PRLHP81277 87 aa6.86□□□□□ -1.31
HSPG2-202ENST00000374676 CEND1Q8N111 149 aa6.85□□□□□ -1.31
HSPG2-202ENST00000374676 HINT1P49773 126 aaPredicted RBP6.84□□□□□ -1.31
HSPG2-202ENST00000374676 LINC01600Q96MT4 127 aa6.84□□□□□ -1.31
HSPG2-202ENST00000374676 HSD52Q0P140 79 aa6.83□□□□□ -1.32
HSPG2-202ENST00000374676 Q6ZRX8 168 aa6.83□□□□□ -1.32
HSPG2-202ENST00000374676 PRO1933Q9H354 126 aa6.83□□□□□ -1.32
HSPG2-202ENST00000374676 TRBV7-6A0A0J9YX20 115 aa6.82□□□□□ -1.32
HSPG2-202ENST00000374676 KRTAP1-4P0C5Y4 121 aa6.82□□□□□ -1.32
HSPG2-202ENST00000374676 CFC1BP0CG36 223 aa6.82□□□□□ -1.32
HSPG2-202ENST00000374676 CFC1P0CG37 223 aa6.82□□□□□ -1.32
HSPG2-202ENST00000374676 SMCR5Q8TEV8 140 aa6.82□□□□□ -1.32
HSPG2-202ENST00000374676 HIGD2AQ9BW72 106 aa6.82□□□□□ -1.32
HSPG2-202ENST00000374676 TMEM238LA0A1B0GVL6 79 aa6.81□□□□□ -1.32
HSPG2-202ENST00000374676 A6NJY4 79 aa6.81□□□□□ -1.32
HSPG2-202ENST00000374676 C6orf99Q4VX62 202 aa6.81□□□□□ -1.32
HSPG2-202ENST00000374676 SMIM11BQ8TCY0 68 aa6.81□□□□□ -1.32
HSPG2-202ENST00000374676 C12orf57Q99622 126 aa6.81□□□□□ -1.32
HSPG2-202ENST00000374676 TNXBP22105 4242 aa6.81□□□□□ -1.32
HSPG2-202ENST00000374676 A0A0B4J2C4 111 aa6.8□□□□□ -1.32
HSPG2-202ENST00000374676 COX7BP24311 80 aa6.8□□□□□ -1.32
HSPG2-202ENST00000374676 FXYD2P54710 66 aa6.8□□□□□ -1.32
HSPG2-202ENST00000374676 ELOF1P60002 83 aaKnown RBP6.8□□□□□ -1.32
HSPG2-202ENST00000374676 Q9BRP9 147 aa6.8□□□□□ -1.32
HSPG2-202ENST00000374676 J3QL48 77 aa6.79□□□□□ -1.32
HSPG2-202ENST00000374676 RPL13AP40429 203 aaKnown RBP6.79□□□□□ -1.32
HSPG2-202ENST00000374676 KRTAP10-8P60410 259 aa6.79□□□□□ -1.32
HSPG2-202ENST00000374676 RAB37Q96AX2 223 aa6.79□□□□□ -1.32
HSPG2-202ENST00000374676 DHRS4-AS1Q9P1J3 65 aa6.79□□□□□ -1.32
HSPG2-202ENST00000374676 A0A1B0GWB2 263 aa6.78□□□□□ -1.32
HSPG2-202ENST00000374676 ERC2-IT1O76042 136 aa6.78□□□□□ -1.32
HSPG2-202ENST00000374676 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
HSPG2-202ENST00000374676 FAM229BQ4G0N7 80 aa6.78□□□□□ -1.32
HSPG2-202ENST00000374676 SPRR4Q96PI1 79 aa6.78□□□□□ -1.32
HSPG2-202ENST00000374676 ZNF706Q9Y5V0 76 aaPredicted RBP6.78□□□□□ -1.32
HSPG2-202ENST00000374676 TSTD3H0UI37 97 aa6.77□□□□□ -1.33
HSPG2-202ENST00000374676 VAMP3Q15836 100 aa6.77□□□□□ -1.33
HSPG2-202ENST00000374676 PRO1854Q9UHT4 67 aa6.77□□□□□ -1.33
HSPG2-202ENST00000374676 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
HSPG2-202ENST00000374676 CRYGAP11844 174 aa6.75□□□□□ -1.33
HSPG2-202ENST00000374676 BVES-AS1Q5T3Y7 98 aa6.75□□□□□ -1.33
HSPG2-202ENST00000374676 NHP2Q9NX24 153 aaKnown RBP6.75□□□□□ -1.33
HSPG2-202ENST00000374676 CTAG1AP78358 180 aa6.74□□□□□ -1.33
HSPG2-202ENST00000374676 LINC00483Q53H64 154 aa6.74□□□□□ -1.33
HSPG2-202ENST00000374676 ANAPC11Q9NYG5 84 aa6.74□□□□□ -1.33
HSPG2-202ENST00000374676 A0A087X002 238 aa6.73□□□□□ -1.33
HSPG2-202ENST00000374676 H7C2G1 150 aa6.73□□□□□ -1.33
HSPG2-202ENST00000374676 HERC1Q15751 4861 aa6.72□□□□□ -1.33
HSPG2-202ENST00000374676 M0R143 59 aa6.72□□□□□ -1.33
HSPG2-202ENST00000374676 GAGE2AQ6NT46 116 aa6.72□□□□□ -1.33
HSPG2-202ENST00000374676 LINC00575Q6W349 94 aa6.72□□□□□ -1.33
HSPG2-202ENST00000374676 H0YGX0 51 aa6.71□□□□□ -1.34
HSPG2-202ENST00000374676 SLC25A20O43772 301 aa6.71□□□□□ -1.34
HSPG2-202ENST00000374676 SPRR1BP22528 89 aa6.71□□□□□ -1.34
HSPG2-202ENST00000374676 Q1RN00 199 aa6.71□□□□□ -1.34
HSPG2-202ENST00000374676 KRTAP13-2Q52LG2 175 aa6.71□□□□□ -1.34
HSPG2-202ENST00000374676 ST20-AS1Q8NBB2 130 aa6.71□□□□□ -1.34
HSPG2-202ENST00000374676 K7ERJ3 54 aa6.7□□□□□ -1.34
HSPG2-202ENST00000374676 hADV29S1A0JD25 119 aa6.69□□□□□ -1.34
HSPG2-202ENST00000374676 TYMSOSQ8TAI1 123 aa6.69□□□□□ -1.34
HSPG2-202ENST00000374676 IGLV5-48A0A075B6I7 105 aa6.68□□□□□ -1.34
HSPG2-202ENST00000374676 TEX49A0A1B0GTD5 131 aa6.67□□□□□ -1.34
HSPG2-202ENST00000374676 TSPAN13O95857 204 aa6.67□□□□□ -1.34
HSPG2-202ENST00000374676 LINC01547P58512 204 aaPredicted RBP6.67□□□□□ -1.34
HSPG2-202ENST00000374676 C3orf22Q8N5N4 141 aa6.67□□□□□ -1.34
HSPG2-202ENST00000374676 A0A1B0GX51 115 aa6.66□□□□□ -1.34
HSPG2-202ENST00000374676 TRIAP1O43715 76 aa6.66□□□□□ -1.34
HSPG2-202ENST00000374676 SNCGO76070 127 aa6.66□□□□□ -1.34
HSPG2-202ENST00000374676 COX6CP09669 75 aa6.65□□□□□ -1.34
HSPG2-202ENST00000374676 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.65□□□□□ -1.34
HSPG2-202ENST00000374676 Q6ZQY7 126 aa6.65□□□□□ -1.34
HSPG2-202ENST00000374676 SSBP3-AS1Q7Z2R9 100 aa6.65□□□□□ -1.34
HSPG2-202ENST00000374676 DEFB105AQ8NG35 78 aa6.65□□□□□ -1.34
HSPG2-202ENST00000374676 PSMB2P49721 201 aa6.64□□□□□ -1.35
HSPG2-202ENST00000374676 FAM218AQ96MZ4 157 aa6.64□□□□□ -1.35
HSPG2-202ENST00000374676 LAMTOR3Q9UHA4 124 aa6.64□□□□□ -1.35
HSPG2-202ENST00000374676 IGLV9-49A0A0B4J1Y8 123 aa6.63□□□□□ -1.35
HSPG2-202ENST00000374676 OCIAD2Q56VL3 154 aa6.63□□□□□ -1.35
HSPG2-202ENST00000374676 SMIM29Q86T20 159 aa6.63□□□□□ -1.35
HSPG2-202ENST00000374676 Q8N377 158 aa6.63□□□□□ -1.35
HSPG2-202ENST00000374676 LINC00304Q8N9R0 145 aa6.62□□□□□ -1.35
HSPG2-202ENST00000374676 PPDPFLQ8WWR9 84 aa6.62□□□□□ -1.35
HSPG2-202ENST00000374676 MOBPQ13875 183 aa6.61□□□□□ -1.35
HSPG2-202ENST00000374676 SPAG11AQ6PDA7 123 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms