RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 C15orf56Q8N910 161 aa9.01□□□□□ -0.97
CLIC4-201ENST00000374379 FBN1P35555 2871 aaKnown RBP9.01□□□□□ -0.97
CLIC4-201ENST00000374379 ATP5EP2Q5VTU8 51 aa9.01□□□□□ -0.97
CLIC4-201ENST00000374379 Q6ZVQ6 151 aa9.01□□□□□ -0.97
CLIC4-201ENST00000374379 VPREB1P12018 145 aa9.01□□□□□ -0.97
CLIC4-201ENST00000374379 COX7CP15954 63 aa9.01□□□□□ -0.97
CLIC4-201ENST00000374379 SERP2Q8N6R1 65 aa9.01□□□□□ -0.97
CLIC4-201ENST00000374379 PDZD2O15018 2839 aa9□□□□□ -0.97
CLIC4-201ENST00000374379 DEFB116Q30KQ4 102 aa9□□□□□ -0.97
CLIC4-201ENST00000374379 C1orf137Q5JT78 98 aa9□□□□□ -0.97
CLIC4-201ENST00000374379 SERTAD4-AS1Q5TG53 156 aa9□□□□□ -0.97
CLIC4-201ENST00000374379 TRBV7-7A0A0K0K1E9 115 aa8.99□□□□□ -0.97
CLIC4-201ENST00000374379 HRCT1Q6UXD1 115 aa8.99□□□□□ -0.97
CLIC4-201ENST00000374379 REG3GQ6UW15 175 aa8.99□□□□□ -0.97
CLIC4-201ENST00000374379 B9D2Q9BPU9 175 aa8.99□□□□□ -0.97
CLIC4-201ENST00000374379 H0Y9J4 135 aa8.99□□□□□ -0.97
CLIC4-201ENST00000374379 LRCOL1A6NCL2 159 aa8.98□□□□□ -0.97
CLIC4-201ENST00000374379 IGLV6-57P01721 117 aa8.98□□□□□ -0.97
CLIC4-201ENST00000374379 CHTF8P0CG12 524 aa8.98□□□□□ -0.97
CLIC4-201ENST00000374379 NDUFS5O43920 106 aa8.98□□□□□ -0.97
CLIC4-201ENST00000374379 ST20-AS1Q8NBB2 130 aa8.97□□□□□ -0.97
CLIC4-201ENST00000374379 Q8NDZ9 215 aa8.97□□□□□ -0.97
CLIC4-201ENST00000374379 DNAH10OSP0CZ25 163 aa8.96□□□□□ -0.97
CLIC4-201ENST00000374379 LINC01547P58512 204 aaPredicted RBP8.96□□□□□ -0.97
CLIC4-201ENST00000374379 ELOF1P60002 83 aaKnown RBP8.96□□□□□ -0.97
CLIC4-201ENST00000374379 IGLV9-49A0A0B4J1Y8 123 aa8.96□□□□□ -0.98
CLIC4-201ENST00000374379 WFDC13Q8IUB5 93 aa8.96□□□□□ -0.98
CLIC4-201ENST00000374379 GVQW2A0A096LPI5 108 aaPredicted RBP8.95□□□□□ -0.98
CLIC4-201ENST00000374379 MDFIQ99750 246 aa8.95□□□□□ -0.98
CLIC4-201ENST00000374379 Q6ZQT0 140 aa8.93□□□□□ -0.98
CLIC4-201ENST00000374379 TENM3Q9P273 2699 aa8.93□□□□□ -0.98
CLIC4-201ENST00000374379 NUPR2A6NF83 97 aa8.92□□□□□ -0.98
CLIC4-201ENST00000374379 NHLRC4P0CG21 123 aaPredicted RBP8.91□□□□□ -0.98
CLIC4-201ENST00000374379 A0A087WSZ3 146 aa8.9□□□□□ -0.98
CLIC4-201ENST00000374379 PRYO14603 147 aa8.9□□□□□ -0.98
CLIC4-201ENST00000374379 PHF5AQ7RTV0 110 aaKnown RBP8.9□□□□□ -0.98
CLIC4-201ENST00000374379 FAM30AQ9NZY2 134 aa8.9□□□□□ -0.98
CLIC4-201ENST00000374379 PKIGQ9Y2B9 76 aa8.9□□□□□ -0.98
CLIC4-201ENST00000374379 J3KT08 172 aa8.89□□□□□ -0.99
CLIC4-201ENST00000374379 PRR4Q16378 134 aa8.89□□□□□ -0.99
CLIC4-201ENST00000374379 A0A0G2JQZ4 141 aa8.89□□□□□ -0.99
CLIC4-201ENST00000374379 A0A1W2PNN7 141 aa8.89□□□□□ -0.99
CLIC4-201ENST00000374379 NDUFB1O75438 58 aa8.88□□□□□ -0.99
CLIC4-201ENST00000374379 SPINK6Q6UWN8 80 aa8.88□□□□□ -0.99
CLIC4-201ENST00000374379 Q9BRP9 147 aa8.88□□□□□ -0.99
CLIC4-201ENST00000374379 Q6ZRX8 168 aa8.87□□□□□ -0.99
CLIC4-201ENST00000374379 F8WDY8 70 aa8.87□□□□□ -0.99
CLIC4-201ENST00000374379 TM2D3Q9BRN9 247 aa8.87□□□□□ -0.99
CLIC4-201ENST00000374379 LINC00528Q8N1L1 170 aa8.86□□□□□ -0.99
CLIC4-201ENST00000374379 WIPF1O43516 503 aa8.86□□□□□ -0.99
CLIC4-201ENST00000374379 FAM236DA0A1B0GTK5 79 aa8.84□□□□□ -0.99
CLIC4-201ENST00000374379 FAM236CP0DP71 79 aa8.84□□□□□ -0.99
CLIC4-201ENST00000374379 MP68P56378 58 aa8.84□□□□□ -1
CLIC4-201ENST00000374379 NBDYA0A0U1RRE5 68 aa8.82□□□□□ -1
CLIC4-201ENST00000374379 TRAV7A0A075B6U4 112 aa8.81□□□□□ -1
CLIC4-201ENST00000374379 LINC00474Q9P2X8 69 aa8.81□□□□□ -1
CLIC4-201ENST00000374379 LOC110117498A0A087WWA1 95 aa8.81□□□□□ -1
CLIC4-201ENST00000374379 IGLV5-52A0A0A0MRZ9 124 aa8.81□□□□□ -1
CLIC4-201ENST00000374379 KCNQ1DNQ9H478 68 aa8.81□□□□□ -1
CLIC4-201ENST00000374379 IGLV1-50A0A075B6I6 118 aa8.8□□□□□ -1
CLIC4-201ENST00000374379 TRBV7-6A0A0J9YX20 115 aa8.8□□□□□ -1
CLIC4-201ENST00000374379 ERC2-IT1O76042 136 aa8.79□□□□□ -1
CLIC4-201ENST00000374379 C16orf90A8MZG2 172 aa8.79□□□□□ -1
CLIC4-201ENST00000374379 Q8N377 158 aa8.79□□□□□ -1
CLIC4-201ENST00000374379 PKD1L1Q8TDX9 2849 aa8.79□□□□□ -1
CLIC4-201ENST00000374379 TMEM258P61165 79 aa8.78□□□□□ -1
CLIC4-201ENST00000374379 LINC00476Q8WZB0 136 aa8.78□□□□□ -1
CLIC4-201ENST00000374379 EPM2AB3EWF7 344 aa8.78□□□□□ -1
CLIC4-201ENST00000374379 MPLKIPQ8TAP9 179 aa8.77□□□□□ -1.01
CLIC4-201ENST00000374379 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
CLIC4-201ENST00000374379 CXCL6P80162 114 aa8.76□□□□□ -1.01
CLIC4-201ENST00000374379 ZNF469Q96JG9 3925 aaPredicted RBP8.76□□□□□ -1.01
CLIC4-201ENST00000374379 LINC01600Q96MT4 127 aa8.76□□□□□ -1.01
CLIC4-201ENST00000374379 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
CLIC4-201ENST00000374379 Q8NBF4 154 aa8.74□□□□□ -1.01
CLIC4-201ENST00000374379 IGKV4-1P06312 121 aa8.73□□□□□ -1.01
CLIC4-201ENST00000374379 CIRBP-AS1Q8TBR5 109 aa8.73□□□□□ -1.01
CLIC4-201ENST00000374379 TRRAPQ9Y4A5 3859 aa8.73□□□□□ -1.01
CLIC4-201ENST00000374379 RPL37AP61513 92 aaKnown RBP8.73□□□□□ -1.01
CLIC4-201ENST00000374379 TRBV7-4A0A0J9YYF1 115 aa8.72□□□□□ -1.01
CLIC4-201ENST00000374379 TMEM254Q8TBM7 123 aa8.72□□□□□ -1.01
CLIC4-201ENST00000374379 OBSCN-AS1Q96MR7 158 aa8.72□□□□□ -1.01
CLIC4-201ENST00000374379 KRTAP26-1Q6PEX3 210 aa8.71□□□□□ -1.02
CLIC4-201ENST00000374379 CRYGAP11844 174 aa8.71□□□□□ -1.02
CLIC4-201ENST00000374379 LINC00208Q96KT6 92 aa8.71□□□□□ -1.02
CLIC4-201ENST00000374379 APLNQ9ULZ1 77 aa8.71□□□□□ -1.02
CLIC4-201ENST00000374379 KRTAP1-5Q9BYS1 174 aa8.7□□□□□ -1.02
CLIC4-201ENST00000374379 RTL8CO15255 209 aa8.69□□□□□ -1.02
CLIC4-201ENST00000374379 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
CLIC4-201ENST00000374379 IGHV6-1A0A0B4J1U7 121 aa8.68□□□□□ -1.02
CLIC4-201ENST00000374379 TLX1NBP0CAT3 122 aa8.68□□□□□ -1.02
CLIC4-201ENST00000374379 MOBPQ13875 183 aa8.67□□□□□ -1.02
CLIC4-201ENST00000374379 CASC2Q6XLA1 102 aa8.67□□□□□ -1.02
CLIC4-201ENST00000374379 ZNF706Q9Y5V0 76 aaPredicted RBP8.67□□□□□ -1.02
CLIC4-201ENST00000374379 ANAPC11Q9NYG5 84 aa8.66□□□□□ -1.02
CLIC4-201ENST00000374379 HCG22E2RYF7 251 aa8.66□□□□□ -1.02
CLIC4-201ENST00000374379 K7EQZ3 153 aa8.66□□□□□ -1.02
CLIC4-201ENST00000374379 A0A1W2PNM2 257 aa8.66□□□□□ -1.02
CLIC4-201ENST00000374379 C9orf163Q8N9P6 203 aa8.65□□□□□ -1.02
CLIC4-201ENST00000374379 IGFL1Q6UW32 110 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms