RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 DSCR10P59022 87 aa9.3□□□□□ -0.92
LMX1B-202ENST00000373474 FAM104AQ969W3 186 aa9.29□□□□□ -0.92
LMX1B-202ENST00000373474 RBM12B-AS1Q9P1G2 102 aa9.28□□□□□ -0.92
LMX1B-202ENST00000373474 ABCA2Q9BZC7 2435 aa9.26□□□□□ -0.93
LMX1B-202ENST00000373474 CENPFP49454 3210 aa9.25□□□□□ -0.93
LMX1B-202ENST00000373474 OBSCN-AS1Q96MR7 158 aa9.25□□□□□ -0.93
LMX1B-202ENST00000373474 Q75L30 129 aa9.22□□□□□ -0.93
LMX1B-202ENST00000373474 MYO9AB2RTY4 2548 aa9.22□□□□□ -0.93
LMX1B-202ENST00000373474 K7EIL1 84 aa9.19□□□□□ -0.94
LMX1B-202ENST00000373474 A0A0G2JQZ4 141 aa9.18□□□□□ -0.94
LMX1B-202ENST00000373474 A0A1W2PNN7 141 aa9.18□□□□□ -0.94
LMX1B-202ENST00000373474 OCR1Q9BZK8 76 aa9.17□□□□□ -0.94
LMX1B-202ENST00000373474 KRTAP1-3Q8IUG1 177 aa9.16□□□□□ -0.94
LMX1B-202ENST00000373474 ZNF861PO60384 105 aa9.16□□□□□ -0.94
LMX1B-202ENST00000373474 A0A1W2PNM2 257 aa9.16□□□□□ -0.94
LMX1B-202ENST00000373474 LINC00304Q8N9R0 145 aa9.14□□□□□ -0.95
LMX1B-202ENST00000373474 PIEZO1Q92508 2521 aa9.14□□□□□ -0.95
LMX1B-202ENST00000373474 IGLV5-37A0A075B6J1 123 aa9.14□□□□□ -0.95
LMX1B-202ENST00000373474 A0A0D9SG42 100 aa9.13□□□□□ -0.95
LMX1B-202ENST00000373474 C9orf163Q8N9P6 203 aa9.13□□□□□ -0.95
LMX1B-202ENST00000373474 LRRK2Q5S007 2527 aa9.13□□□□□ -0.95
LMX1B-202ENST00000373474 ANKRD11Q6UB99 2663 aaPredicted RBP9.12□□□□□ -0.95
LMX1B-202ENST00000373474 DNAH12Q6ZR08 3092 aa9.12□□□□□ -0.95
LMX1B-202ENST00000373474 IGLV7-46A0A075B6I9 117 aa9.12□□□□□ -0.95
LMX1B-202ENST00000373474 A0A0A0MQY5 61 aa9.12□□□□□ -0.95
LMX1B-202ENST00000373474 ABCA12Q86UK0 2595 aa9.11□□□□□ -0.95
LMX1B-202ENST00000373474 IGLV5-48A0A075B6I7 105 aa9.11□□□□□ -0.95
LMX1B-202ENST00000373474 CNBPP62633 177 aaKnown RBP9.11□□□□□ -0.95
LMX1B-202ENST00000373474 CASC10Q5T4H9 136 aa9.11□□□□□ -0.95
LMX1B-202ENST00000373474 FN1P02751 2386 aaKnown RBP9.11□□□□□ -0.95
LMX1B-202ENST00000373474 Q5XG85 94 aa9.1□□□□□ -0.95
LMX1B-202ENST00000373474 A0A087WTM6 91 aa9.1□□□□□ -0.95
LMX1B-202ENST00000373474 WWC2-AS2Q96NR7 200 aa9.1□□□□□ -0.95
LMX1B-202ENST00000373474 COX6B2Q6YFQ2 88 aa9.09□□□□□ -0.95
LMX1B-202ENST00000373474 USP9XQ93008 2570 aaPredicted RBP9.09□□□□□ -0.95
LMX1B-202ENST00000373474 LINC01558Q9Y6Z2 57 aa9.09□□□□□ -0.95
LMX1B-202ENST00000373474 LINC00483Q53H64 154 aa9.08□□□□□ -0.96
LMX1B-202ENST00000373474 BPTFQ12830 3046 aa9.08□□□□□ -0.96
LMX1B-202ENST00000373474 KRTAP1-1Q07627 177 aa9.08□□□□□ -0.96
LMX1B-202ENST00000373474 SPRR4Q96PI1 79 aa9.07□□□□□ -0.96
LMX1B-202ENST00000373474 ANKRD17O75179 2603 aaKnown RBP9.06□□□□□ -0.96
LMX1B-202ENST00000373474 PRR26Q8N8Z3 221 aa9.06□□□□□ -0.96
LMX1B-202ENST00000373474 DMAC1Q96GE9 116 aa9.06□□□□□ -0.96
LMX1B-202ENST00000373474 A0A1B0GU33 70 aa9.05□□□□□ -0.96
LMX1B-202ENST00000373474 MYO18BQ8IUG5 2567 aa9.05□□□□□ -0.96
LMX1B-202ENST00000373474 Q8N1X5 172 aa9.05□□□□□ -0.96
LMX1B-202ENST00000373474 CEP295Q9C0D2 2601 aa9.04□□□□□ -0.96
LMX1B-202ENST00000373474 C9orf92A6NGG3 77 aa9.04□□□□□ -0.96
LMX1B-202ENST00000373474 IGLV7-43P04211 117 aa9.04□□□□□ -0.96
LMX1B-202ENST00000373474 DOPEY1Q5JWR5 2465 aa9.04□□□□□ -0.96
LMX1B-202ENST00000373474 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
LMX1B-202ENST00000373474 PSORS1C2Q9UIG4 136 aa9.02□□□□□ -0.96
LMX1B-202ENST00000373474 Q8N9P0 234 aaPredicted RBP9.01□□□□□ -0.97
LMX1B-202ENST00000373474 ZNF462Q96JM2 2506 aa9□□□□□ -0.97
LMX1B-202ENST00000373474 TLN2Q9Y4G6 2542 aa8.99□□□□□ -0.97
LMX1B-202ENST00000373474 FP248Q71RG6 208 aaPredicted RBP8.98□□□□□ -0.97
LMX1B-202ENST00000373474 PRAC1Q96KF2 57 aa8.96□□□□□ -0.97
LMX1B-202ENST00000373474 FAM229BQ4G0N7 80 aa8.96□□□□□ -0.98
LMX1B-202ENST00000373474 USP9YO00507 2555 aaPredicted RBP8.96□□□□□ -0.98
LMX1B-202ENST00000373474 JMJD1CQ15652 2540 aa8.94□□□□□ -0.98
LMX1B-202ENST00000373474 Q5VV11 94 aa8.94□□□□□ -0.98
LMX1B-202ENST00000373474 HRES1P13985 223 aa8.94□□□□□ -0.98
LMX1B-202ENST00000373474 CSAG1Q6PB30 78 aa8.92□□□□□ -0.98
LMX1B-202ENST00000373474 J3QL48 77 aa8.91□□□□□ -0.98
LMX1B-202ENST00000373474 Q8NDZ9 215 aa8.89□□□□□ -0.99
LMX1B-202ENST00000373474 CAMK2N1Q7Z7J9 78 aa8.88□□□□□ -0.99
LMX1B-202ENST00000373474 ASB16-AS1Q495Z4 193 aa8.86□□□□□ -0.99
LMX1B-202ENST00000373474 SETD2Q9BYW2 2564 aaPredicted RBP8.85□□□□□ -0.99
LMX1B-202ENST00000373474 ZFYVE26Q68DK2 2539 aa8.85□□□□□ -0.99
LMX1B-202ENST00000373474 POLQO75417 2590 aa8.84□□□□□ -0.99
LMX1B-202ENST00000373474 CHD8Q9HCK8 2581 aa8.83□□□□□ -1
LMX1B-202ENST00000373474 PKD1L2Q7Z442 2459 aa8.83□□□□□ -1
LMX1B-202ENST00000373474 SPRR1AP35321 89 aa8.82□□□□□ -1
LMX1B-202ENST00000373474 SMR3BP02814 79 aaPredicted RBP8.82□□□□□ -1
LMX1B-202ENST00000373474 MMP24-AS1A0A0U1RRL7 71 aa8.82□□□□□ -1
LMX1B-202ENST00000373474 CYSTM1Q9H1C7 97 aa8.82□□□□□ -1
LMX1B-202ENST00000373474 SPINK7P58062 85 aa8.81□□□□□ -1
LMX1B-202ENST00000373474 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.8□□□□□ -1
LMX1B-202ENST00000373474 SPTBN4Q9H254 2564 aa8.8□□□□□ -1
LMX1B-202ENST00000373474 UTRNP46939 3433 aa8.78□□□□□ -1
LMX1B-202ENST00000373474 MTORP42345 2549 aa8.77□□□□□ -1.01
LMX1B-202ENST00000373474 ROMO1P60602 79 aa8.75□□□□□ -1.01
LMX1B-202ENST00000373474 CEP350Q5VT06 3117 aa8.75□□□□□ -1.01
LMX1B-202ENST00000373474 ZCCHC13Q8WW36 166 aaKnown RBP8.74□□□□□ -1.01
LMX1B-202ENST00000373474 C5orf42Q9H799 3197 aa8.74□□□□□ -1.01
LMX1B-202ENST00000373474 CHD7Q9P2D1 2997 aa8.74□□□□□ -1.01
LMX1B-202ENST00000373474 CR1P17927 2039 aa8.73□□□□□ -1.01
LMX1B-202ENST00000373474 ACANP16112 2415 aa8.73□□□□□ -1.01
LMX1B-202ENST00000373474 TNP2Q05952 138 aa8.73□□□□□ -1.01
LMX1B-202ENST00000373474 Q6ZSA8 131 aa8.72□□□□□ -1.01
LMX1B-202ENST00000373474 SPRR1BP22528 89 aa8.71□□□□□ -1.02
LMX1B-202ENST00000373474 PLAC8Q9NZF1 115 aa8.71□□□□□ -1.02
LMX1B-202ENST00000373474 S4R3F8 94 aa8.7□□□□□ -1.02
LMX1B-202ENST00000373474 OXTP01178 125 aa8.69□□□□□ -1.02
LMX1B-202ENST00000373474 KRTAP26-1Q6PEX3 210 aa8.69□□□□□ -1.02
LMX1B-202ENST00000373474 Q5W150 140 aa8.69□□□□□ -1.02
LMX1B-202ENST00000373474 LINC00472Q9H8W2 130 aa8.69□□□□□ -1.02
LMX1B-202ENST00000373474 RPL37P61927 97 aaKnown RBP8.68□□□□□ -1.02
LMX1B-202ENST00000373474 KRTAP16-1A8MUX0 517 aa8.66□□□□□ -1.02
LMX1B-202ENST00000373474 F8P00451 2351 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms