RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 C3orf84H3BNL1 204 aa9.81□□□□□ -0.84
COL9A2-202ENST00000372748 SMIM26A0A096LP01 95 aa9.8□□□□□ -0.84
COL9A2-202ENST00000372748 PKD1L1Q8TDX9 2849 aa9.79□□□□□ -0.84
COL9A2-202ENST00000372748 Q6ZRU5 148 aa9.78□□□□□ -0.84
COL9A2-202ENST00000372748 DEFB105AQ8NG35 78 aa9.78□□□□□ -0.84
COL9A2-202ENST00000372748 LINC00528Q8N1L1 170 aa9.78□□□□□ -0.84
COL9A2-202ENST00000372748 RETNQ9HD89 108 aa9.78□□□□□ -0.84
COL9A2-202ENST00000372748 NDUFC1O43677 76 aa9.77□□□□□ -0.85
COL9A2-202ENST00000372748 IGKV4-1P06312 121 aa9.77□□□□□ -0.85
COL9A2-202ENST00000372748 WFDC10BQ8IUB3 73 aa9.77□□□□□ -0.85
COL9A2-202ENST00000372748 M0R378 163 aa9.76□□□□□ -0.85
COL9A2-202ENST00000372748 MRAPQ8TCY5 172 aa9.76□□□□□ -0.85
COL9A2-202ENST00000372748 PRO0628Q9UI54 55 aa9.75□□□□□ -0.85
COL9A2-202ENST00000372748 FAM229BQ4G0N7 80 aa9.74□□□□□ -0.85
COL9A2-202ENST00000372748 OXLD1Q5BKU9 147 aa9.74□□□□□ -0.85
COL9A2-202ENST00000372748 MPLKIPQ8TAP9 179 aa9.73□□□□□ -0.85
COL9A2-202ENST00000372748 EGFEM1PQ0D2K5 195 aa9.73□□□□□ -0.85
COL9A2-202ENST00000372748 OCR1Q9BZK8 76 aa9.73□□□□□ -0.85
COL9A2-202ENST00000372748 NOTCH1P46531 2555 aa9.72□□□□□ -0.85
COL9A2-202ENST00000372748 Q6ZRP5 223 aa9.72□□□□□ -0.85
COL9A2-202ENST00000372748 HIGD2AQ9BW72 106 aa9.72□□□□□ -0.85
COL9A2-202ENST00000372748 C1orf43Q9BWL3 253 aa9.72□□□□□ -0.85
COL9A2-202ENST00000372748 PRYO14603 147 aa9.71□□□□□ -0.86
COL9A2-202ENST00000372748 KPRPQ5T749 579 aaPredicted RBP9.71□□□□□ -0.86
COL9A2-202ENST00000372748 C15orf56Q8N910 161 aa9.71□□□□□ -0.86
COL9A2-202ENST00000372748 F8WDY8 70 aa9.7□□□□□ -0.86
COL9A2-202ENST00000372748 Q6ZTC4 211 aa9.7□□□□□ -0.86
COL9A2-202ENST00000372748 A0A0U1RQV1 116 aa9.69□□□□□ -0.86
COL9A2-202ENST00000372748 KRTAP26-1Q6PEX3 210 aa9.69□□□□□ -0.86
COL9A2-202ENST00000372748 ANK2Q01484 3957 aa9.69□□□□□ -0.86
COL9A2-202ENST00000372748 TENM3Q9P273 2699 aa9.69□□□□□ -0.86
COL9A2-202ENST00000372748 ATP5EP56381 51 aaPredicted RBP9.69□□□□□ -0.86
COL9A2-202ENST00000372748 PKIGQ9Y2B9 76 aa9.69□□□□□ -0.86
COL9A2-202ENST00000372748 BRK1Q8WUW1 75 aa9.68□□□□□ -0.86
COL9A2-202ENST00000372748 ERC2-IT1O76042 136 aa9.68□□□□□ -0.86
COL9A2-202ENST00000372748 Q8N377 158 aa9.68□□□□□ -0.86
COL9A2-202ENST00000372748 FAM30AQ9NZY2 134 aa9.68□□□□□ -0.86
COL9A2-202ENST00000372748 KRTAP10-11P60412 298 aa9.67□□□□□ -0.86
COL9A2-202ENST00000372748 FUSP35637 526 aaKnown RBP eCLIP9.67□□□□□ -0.86
COL9A2-202ENST00000372748 SERTAD4-AS1Q5TG53 156 aa9.66□□□□□ -0.86
COL9A2-202ENST00000372748 SMIM29Q86T20 159 aa9.66□□□□□ -0.86
COL9A2-202ENST00000372748 NKAPP1Q8N9T2 125 aa9.65□□□□□ -0.86
COL9A2-202ENST00000372748 RPL37AP8A6NKH3 93 aa9.65□□□□□ -0.87
COL9A2-202ENST00000372748 ESRGQ1W209 222 aa9.65□□□□□ -0.87
COL9A2-202ENST00000372748 IGKV2D-24A0A075B6R9 120 aa9.64□□□□□ -0.87
COL9A2-202ENST00000372748 C7orf33Q8WU49 177 aa9.64□□□□□ -0.87
COL9A2-202ENST00000372748 MGAM2Q2M2H8 2515 aa9.62□□□□□ -0.87
COL9A2-202ENST00000372748 A0A1W2PNM2 257 aa9.62□□□□□ -0.87
COL9A2-202ENST00000372748 LRCOL1A6NCL2 159 aa9.61□□□□□ -0.87
COL9A2-202ENST00000372748 SYCNQ0VAF6 134 aa9.61□□□□□ -0.87
COL9A2-202ENST00000372748 KRTAP24-1Q3LI83 254 aa9.61□□□□□ -0.87
COL9A2-202ENST00000372748 KCNQ1DNQ9H478 68 aa9.61□□□□□ -0.87
COL9A2-202ENST00000372748 IGLV5-48A0A075B6I7 105 aa9.61□□□□□ -0.87
COL9A2-202ENST00000372748 ST20-AS1Q8NBB2 130 aa9.61□□□□□ -0.87
COL9A2-202ENST00000372748 NBEAL1Q6ZS30 2694 aa9.6□□□□□ -0.87
COL9A2-202ENST00000372748 FAM168BA1KXE4 195 aa9.59□□□□□ -0.87
COL9A2-202ENST00000372748 SEC61GP60059 68 aa9.59□□□□□ -0.87
COL9A2-202ENST00000372748 Q9BRP9 147 aa9.59□□□□□ -0.87
COL9A2-202ENST00000372748 C1orf137Q5JT78 98 aa9.58□□□□□ -0.88
COL9A2-202ENST00000372748 DEFB131BA0A096LNP1 70 aa9.57□□□□□ -0.88
COL9A2-202ENST00000372748 H3BNG1 76 aa9.57□□□□□ -0.88
COL9A2-202ENST00000372748 Q6ZRX8 168 aa9.56□□□□□ -0.88
COL9A2-202ENST00000372748 A0A0G2JQZ4 141 aa9.54□□□□□ -0.88
COL9A2-202ENST00000372748 A0A1W2PNN7 141 aa9.54□□□□□ -0.88
COL9A2-202ENST00000372748 K7EQZ3 153 aa9.54□□□□□ -0.88
COL9A2-202ENST00000372748 C11orf45Q8TAV5 145 aa9.54□□□□□ -0.88
COL9A2-202ENST00000372748 ETDCA0A1B0GVM5 59 aa9.53□□□□□ -0.88
COL9A2-202ENST00000372748 DHRS4-AS1Q9P1J3 65 aa9.53□□□□□ -0.88
COL9A2-202ENST00000372748 DSCR10P59022 87 aa9.53□□□□□ -0.88
COL9A2-202ENST00000372748 PRR4Q16378 134 aa9.53□□□□□ -0.88
COL9A2-202ENST00000372748 Q8NBF4 154 aa9.53□□□□□ -0.88
COL9A2-202ENST00000372748 CMYA5Q8N3K9 4069 aa9.52□□□□□ -0.89
COL9A2-202ENST00000372748 TNP2Q05952 138 aa9.52□□□□□ -0.89
COL9A2-202ENST00000372748 LINC01556Q5JQF7 62 aa9.51□□□□□ -0.89
COL9A2-202ENST00000372748 KRTAP4-16G5E9R7 235 aaPredicted RBP9.51□□□□□ -0.89
COL9A2-202ENST00000372748 PRB2P02812 416 aaPredicted RBP9.51□□□□□ -0.89
COL9A2-202ENST00000372748 hDV103S1A0JD37 113 aa9.5□□□□□ -0.89
COL9A2-202ENST00000372748 DEFB116Q30KQ4 102 aa9.5□□□□□ -0.89
COL9A2-202ENST00000372748 V9GYY9 64 aa9.5□□□□□ -0.89
COL9A2-202ENST00000372748 IGLV1-50A0A075B6I6 118 aa9.5□□□□□ -0.89
COL9A2-202ENST00000372748 C1orf64Q8NEQ6 169 aa9.5□□□□□ -0.89
COL9A2-202ENST00000372748 CASC10Q5T4H9 136 aa9.49□□□□□ -0.89
COL9A2-202ENST00000372748 UBE2BP63146 152 aa9.49□□□□□ -0.89
COL9A2-202ENST00000372748 KRTAP7-1Q8IUC3 87 aa9.49□□□□□ -0.89
COL9A2-202ENST00000372748 LCE6AA0A183 80 aa9.48□□□□□ -0.89
COL9A2-202ENST00000372748 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.48□□□□□ -0.89
COL9A2-202ENST00000372748 SPRR4Q96PI1 79 aa9.47□□□□□ -0.89
COL9A2-202ENST00000372748 C1orf195Q5TG92 126 aa9.45□□□□□ -0.9
COL9A2-202ENST00000372748 ZCCHC13Q8WW36 166 aaKnown RBP9.45□□□□□ -0.9
COL9A2-202ENST00000372748 SPRR1AP35321 89 aa9.45□□□□□ -0.9
COL9A2-202ENST00000372748 A0A1B0GW54 56 aa9.45□□□□□ -0.9
COL9A2-202ENST00000372748 WFDC13Q8IUB5 93 aa9.44□□□□□ -0.9
COL9A2-202ENST00000372748 HCG22E2RYF7 251 aa9.43□□□□□ -0.9
COL9A2-202ENST00000372748 PSPHP1O15172 72 aa9.43□□□□□ -0.9
COL9A2-202ENST00000372748 DNAH10OSP0CZ25 163 aa9.43□□□□□ -0.9
COL9A2-202ENST00000372748 LINC00588Q9Y4M8 146 aa9.43□□□□□ -0.9
COL9A2-202ENST00000372748 PSCAO43653 123 aa9.43□□□□□ -0.9
COL9A2-202ENST00000372748 MRPL55Q7Z7F7 128 aaKnown RBP9.43□□□□□ -0.9
COL9A2-202ENST00000372748 LINC00476Q8WZB0 136 aa9.43□□□□□ -0.9
COL9A2-202ENST00000372748 TLX1NBP0CAT3 122 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms