RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 Q8N9L7 120 aa6.83□□□□□ -1.32
KDM4A-201ENST00000372396 KRTAP10-11P60412 298 aa6.83□□□□□ -1.32
KDM4A-201ENST00000372396 LINC01556Q5JQF7 62 aa6.83□□□□□ -1.32
KDM4A-201ENST00000372396 ITPR1Q14643 2758 aa6.83□□□□□ -1.32
KDM4A-201ENST00000372396 UNC79Q9P2D8 2635 aa6.82□□□□□ -1.32
KDM4A-201ENST00000372396 C8orf87E5RJ46 101 aa6.82□□□□□ -1.32
KDM4A-201ENST00000372396 ADGRG4Q8IZF6 3080 aa6.81□□□□□ -1.32
KDM4A-201ENST00000372396 C9orf116Q5BN46 136 aaPredicted RBP6.8□□□□□ -1.32
KDM4A-201ENST00000372396 CYP4F30PQ9H0H9 118 aa6.8□□□□□ -1.32
KDM4A-201ENST00000372396 DEFB105AQ8NG35 78 aa6.79□□□□□ -1.32
KDM4A-201ENST00000372396 SPATA3Q8NHX4 192 aa6.78□□□□□ -1.32
KDM4A-201ENST00000372396 B9D2Q9BPU9 175 aa6.78□□□□□ -1.32
KDM4A-201ENST00000372396 IGKV2-24A0A0C4DH68 120 aa6.78□□□□□ -1.32
KDM4A-201ENST00000372396 CASC2Q6XLA1 102 aa6.78□□□□□ -1.32
KDM4A-201ENST00000372396 LINC00575Q6W349 94 aa6.78□□□□□ -1.32
KDM4A-201ENST00000372396 CHD6Q8TD26 2715 aa6.77□□□□□ -1.32
KDM4A-201ENST00000372396 PRR3P79522 188 aaKnown RBP6.77□□□□□ -1.33
KDM4A-201ENST00000372396 C3orf84H3BNL1 204 aa6.77□□□□□ -1.33
KDM4A-201ENST00000372396 LINC00208Q96KT6 92 aa6.77□□□□□ -1.33
KDM4A-201ENST00000372396 BSNQ9UPA5 3926 aa6.76□□□□□ -1.33
KDM4A-201ENST00000372396 SMIM29Q86T20 159 aa6.76□□□□□ -1.33
KDM4A-201ENST00000372396 NBEAQ8NFP9 2946 aa6.75□□□□□ -1.33
KDM4A-201ENST00000372396 K7EIL1 84 aa6.75□□□□□ -1.33
KDM4A-201ENST00000372396 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.74□□□□□ -1.33
KDM4A-201ENST00000372396 C16orf90A8MZG2 172 aa6.74□□□□□ -1.33
KDM4A-201ENST00000372396 KALRNO60229 2985 aa6.74□□□□□ -1.33
KDM4A-201ENST00000372396 LINC00167Q96N53 147 aa6.74□□□□□ -1.33
KDM4A-201ENST00000372396 DHRS4-AS1Q9P1J3 65 aa6.73□□□□□ -1.33
KDM4A-201ENST00000372396 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.73□□□□□ -1.33
KDM4A-201ENST00000372396 OCR1Q9BZK8 76 aa6.73□□□□□ -1.33
KDM4A-201ENST00000372396 PHF5AQ7RTV0 110 aaKnown RBP6.73□□□□□ -1.33
KDM4A-201ENST00000372396 M0R2N4 97 aa6.72□□□□□ -1.33
KDM4A-201ENST00000372396 DNAH10OSP0CZ25 163 aa6.72□□□□□ -1.33
KDM4A-201ENST00000372396 PRR34Q9NV39 138 aa6.72□□□□□ -1.33
KDM4A-201ENST00000372396 LRBAP50851 2863 aa6.72□□□□□ -1.33
KDM4A-201ENST00000372396 Q5VV11 94 aa6.72□□□□□ -1.33
KDM4A-201ENST00000372396 TEX15Q9BXT5 2789 aa6.71□□□□□ -1.33
KDM4A-201ENST00000372396 ATRQ13535 2644 aa6.71□□□□□ -1.34
KDM4A-201ENST00000372396 FAM104AQ969W3 186 aa6.71□□□□□ -1.34
KDM4A-201ENST00000372396 HRNRQ86YZ3 2850 aaPredicted RBP6.71□□□□□ -1.34
KDM4A-201ENST00000372396 GVQW2A0A096LPI5 108 aaPredicted RBP6.71□□□□□ -1.34
KDM4A-201ENST00000372396 C6orf48Q9UBA6 75 aa6.71□□□□□ -1.34
KDM4A-201ENST00000372396 SPENQ96T58 3664 aaKnown RBP6.71□□□□□ -1.34
KDM4A-201ENST00000372396 COL12A1Q99715 3063 aa6.7□□□□□ -1.34
KDM4A-201ENST00000372396 CDC42SE1Q9NRR8 79 aa6.7□□□□□ -1.34
KDM4A-201ENST00000372396 UBR5O95071 2799 aaPredicted RBP6.7□□□□□ -1.34
KDM4A-201ENST00000372396 IGKV4-1P06312 121 aa6.7□□□□□ -1.34
KDM4A-201ENST00000372396 CDK2AP2O75956 126 aa6.69□□□□□ -1.34
KDM4A-201ENST00000372396 KMT2BQ9UMN6 2715 aaPredicted RBP6.69□□□□□ -1.34
KDM4A-201ENST00000372396 C10orf25Q5T742 122 aa6.69□□□□□ -1.34
KDM4A-201ENST00000372396 MAP1AP78559 2803 aaPredicted RBP6.68□□□□□ -1.34
KDM4A-201ENST00000372396 LINC01554Q52M75 96 aa6.68□□□□□ -1.34
KDM4A-201ENST00000372396 RPL37AP8A6NKH3 93 aa6.67□□□□□ -1.34
KDM4A-201ENST00000372396 LY6G6CO95867 125 aa6.67□□□□□ -1.34
KDM4A-201ENST00000372396 UTP20O75691 2785 aaKnown RBP6.66□□□□□ -1.34
KDM4A-201ENST00000372396 LOC101927531A0A1B0GV80 90 aa6.66□□□□□ -1.34
KDM4A-201ENST00000372396 KIAA0087Q14695 138 aa6.66□□□□□ -1.34
KDM4A-201ENST00000372396 ELOF1P60002 83 aaKnown RBP6.66□□□□□ -1.34
KDM4A-201ENST00000372396 A8MU10 97 aa6.65□□□□□ -1.34
KDM4A-201ENST00000372396 WFDC13Q8IUB5 93 aa6.64□□□□□ -1.35
KDM4A-201ENST00000372396 REG3GQ6UW15 175 aa6.63□□□□□ -1.35
KDM4A-201ENST00000372396 Q75L30 129 aa6.63□□□□□ -1.35
KDM4A-201ENST00000372396 A6NN06 94 aa6.63□□□□□ -1.35
KDM4A-201ENST00000372396 PRR26Q8N8Z3 221 aa6.63□□□□□ -1.35
KDM4A-201ENST00000372396 SMG1Q96Q15 3661 aaKnown RBP6.63□□□□□ -1.35
KDM4A-201ENST00000372396 APCP25054 2843 aa6.62□□□□□ -1.35
KDM4A-201ENST00000372396 Q8N9P0 234 aaPredicted RBP6.62□□□□□ -1.35
KDM4A-201ENST00000372396 RETNLBQ9BQ08 111 aa6.62□□□□□ -1.35
KDM4A-201ENST00000372396 RELNP78509 3460 aa6.62□□□□□ -1.35
KDM4A-201ENST00000372396 NBDYA0A0U1RRE5 68 aa6.61□□□□□ -1.35
KDM4A-201ENST00000372396 C1orf134Q5TEV5 83 aa6.61□□□□□ -1.35
KDM4A-201ENST00000372396 ZNF706Q9Y5V0 76 aaPredicted RBP6.61□□□□□ -1.35
KDM4A-201ENST00000372396 SPAG11AQ6PDA7 123 aa6.6□□□□□ -1.35
KDM4A-201ENST00000372396 C7orf33Q8WU49 177 aa6.6□□□□□ -1.35
KDM4A-201ENST00000372396 SETXQ7Z333 2677 aaKnown RBP6.6□□□□□ -1.35
KDM4A-201ENST00000372396 MAST4O15021 2626 aa6.6□□□□□ -1.35
KDM4A-201ENST00000372396 PRAC1Q96KF2 57 aa6.6□□□□□ -1.35
KDM4A-201ENST00000372396 C15orf56Q8N910 161 aa6.59□□□□□ -1.35
KDM4A-201ENST00000372396 LINC00313P59037 77 aa6.59□□□□□ -1.35
KDM4A-201ENST00000372396 H0Y9P7 68 aa6.58□□□□□ -1.36
KDM4A-201ENST00000372396 IGLV6-57P01721 117 aa6.58□□□□□ -1.36
KDM4A-201ENST00000372396 MOBPQ13875 183 aa6.58□□□□□ -1.36
KDM4A-201ENST00000372396 IGLV5-52A0A0A0MRZ9 124 aa6.57□□□□□ -1.36
KDM4A-201ENST00000372396 COA5Q86WW8 74 aa6.57□□□□□ -1.36
KDM4A-201ENST00000372396 ITPR2Q14571 2701 aa6.56□□□□□ -1.36
KDM4A-201ENST00000372396 ST20-AS1Q8NBB2 130 aa6.56□□□□□ -1.36
KDM4A-201ENST00000372396 DEFB116Q30KQ4 102 aa6.56□□□□□ -1.36
KDM4A-201ENST00000372396 APLNQ9ULZ1 77 aa6.54□□□□□ -1.36
KDM4A-201ENST00000372396 TLX1NBP0CAT3 122 aa6.54□□□□□ -1.36
KDM4A-201ENST00000372396 Q9BRP9 147 aa6.54□□□□□ -1.36
KDM4A-201ENST00000372396 SPANXA2-OT1Q8N9U9 137 aa6.54□□□□□ -1.36
KDM4A-201ENST00000372396 TACC2O95359 2948 aa6.53□□□□□ -1.36
KDM4A-201ENST00000372396 H3BPC8 53 aa6.53□□□□□ -1.36
KDM4A-201ENST00000372396 GCN1Q92616 2671 aaKnown RBP6.53□□□□□ -1.36
KDM4A-201ENST00000372396 C1orf137Q5JT78 98 aa6.53□□□□□ -1.36
KDM4A-201ENST00000372396 TEP1Q99973 2627 aaKnown RBP6.52□□□□□ -1.37
KDM4A-201ENST00000372396 WWC2-AS2Q96NR7 200 aa6.52□□□□□ -1.37
KDM4A-201ENST00000372396 A0A1B0GW54 56 aa6.52□□□□□ -1.37
KDM4A-201ENST00000372396 PLA2G2DQ9UNK4 145 aa6.52□□□□□ -1.37
KDM4A-201ENST00000372396 Q6ZRX8 168 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms