RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 C11orf45Q8TAV5 145 aa3.65□□□□□ -1.83
ATG4A-204ENST00000372246 C16orf74Q96GX8 76 aa3.65□□□□□ -1.83
ATG4A-204ENST00000372246 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.83
ATG4A-204ENST00000372246 CELA1Q9UNI1 258 aa3.65□□□□□ -1.83
ATG4A-204ENST00000372246 SRRM2Q9UQ35 2752 aaKnown RBP3.64□□□□□ -1.83
ATG4A-204ENST00000372246 FBN1P35555 2871 aaKnown RBP3.64□□□□□ -1.83
ATG4A-204ENST00000372246 DNAJC9-AS1A6NH13 148 aa3.64□□□□□ -1.83
ATG4A-204ENST00000372246 CYSRT1A8MQ03 144 aa3.64□□□□□ -1.83
ATG4A-204ENST00000372246 HIGD2BQ4VC39 106 aa3.64□□□□□ -1.83
ATG4A-204ENST00000372246 Q8IZM0 81 aa3.64□□□□□ -1.83
ATG4A-204ENST00000372246 FSHBP01225 129 aa3.64□□□□□ -1.83
ATG4A-204ENST00000372246 KRTAP10-2P60368 255 aa3.64□□□□□ -1.83
ATG4A-204ENST00000372246 REG3AQ06141 175 aa3.64□□□□□ -1.83
ATG4A-204ENST00000372246 PRR4Q16378 134 aa3.64□□□□□ -1.83
ATG4A-204ENST00000372246 DEFB105AQ8NG35 78 aa3.64□□□□□ -1.83
ATG4A-204ENST00000372246 KLK12Q9UKR0 248 aa3.64□□□□□ -1.83
ATG4A-204ENST00000372246 TRAV7A0A075B6U4 112 aa3.63□□□□□ -1.83
ATG4A-204ENST00000372246 A0A0G2JQZ4 141 aa3.63□□□□□ -1.83
ATG4A-204ENST00000372246 A0A1W2PNN7 141 aa3.63□□□□□ -1.83
ATG4A-204ENST00000372246 MUC7Q8TAX7 377 aa3.63□□□□□ -1.83
ATG4A-204ENST00000372246 HIGD2AQ9BW72 106 aa3.63□□□□□ -1.83
ATG4A-204ENST00000372246 SPAG11BQ08648 103 aa3.62□□□□□ -1.83
ATG4A-204ENST00000372246 DEFB135Q30KP9 77 aa3.62□□□□□ -1.83
ATG4A-204ENST00000372246 ATP5EP56381 51 aaPredicted RBP3.62□□□□□ -1.83
ATG4A-204ENST00000372246 NREPQ16612 68 aa3.62□□□□□ -1.83
ATG4A-204ENST00000372246 RBM12B-AS1Q9P1G2 102 aa3.62□□□□□ -1.83
ATG4A-204ENST00000372246 ATRQ13535 2644 aa3.61□□□□□ -1.83
ATG4A-204ENST00000372246 TRBV7-4A0A0J9YYF1 115 aa3.61□□□□□ -1.83
ATG4A-204ENST00000372246 MIFP14174 115 aa3.61□□□□□ -1.83
ATG4A-204ENST00000372246 APOC4P55056 127 aa3.61□□□□□ -1.83
ATG4A-204ENST00000372246 KLKP1Q107X0 134 aa3.61□□□□□ -1.83
ATG4A-204ENST00000372246 LINC00612Q8N6U2 182 aa3.61□□□□□ -1.83
ATG4A-204ENST00000372246 FAM30AQ9NZY2 134 aa3.61□□□□□ -1.83
ATG4A-204ENST00000372246 A8MU10 97 aa3.61□□□□□ -1.83
ATG4A-204ENST00000372246 ATP5EP2Q5VTU8 51 aa3.61□□□□□ -1.83
ATG4A-204ENST00000372246 TMEM254Q8TBM7 123 aa3.61□□□□□ -1.83
ATG4A-204ENST00000372246 C6orf48Q9UBA6 75 aa3.61□□□□□ -1.83
ATG4A-204ENST00000372246 COL7A1Q02388 2944 aa3.6□□□□□ -1.83
ATG4A-204ENST00000372246 TENM3Q9P273 2699 aa3.6□□□□□ -1.83
ATG4A-204ENST00000372246 SMR3AQ99954 134 aa3.6□□□□□ -1.83
ATG4A-204ENST00000372246 IGLV1-51P01701 117 aa3.6□□□□□ -1.83
ATG4A-204ENST00000372246 IGLV6-57P01721 117 aa3.6□□□□□ -1.83
ATG4A-204ENST00000372246 DEFB116Q30KQ4 102 aa3.6□□□□□ -1.83
ATG4A-204ENST00000372246 LOC110117498A0A087WWA1 95 aa3.59□□□□□ -1.83
ATG4A-204ENST00000372246 ZNF73O43830 326 aaPredicted RBP3.59□□□□□ -1.83
ATG4A-204ENST00000372246 VPREB1P12018 145 aa3.59□□□□□ -1.83
ATG4A-204ENST00000372246 KRTAP10-3P60369 221 aa3.59□□□□□ -1.83
ATG4A-204ENST00000372246 PRO0255Q9UI72 69 aa3.59□□□□□ -1.83
ATG4A-204ENST00000372246 FASNP49327 2511 aaKnown RBP3.59□□□□□ -1.83
ATG4A-204ENST00000372246 A0A1B0GUV1 79 aa3.59□□□□□ -1.84
ATG4A-204ENST00000372246 BCE1O60756 84 aa3.59□□□□□ -1.84
ATG4A-204ENST00000372246 IGKV4-1P06312 121 aa3.59□□□□□ -1.84
ATG4A-204ENST00000372246 ANK2Q01484 3957 aa3.58□□□□□ -1.84
ATG4A-204ENST00000372246 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
ATG4A-204ENST00000372246 PRR26Q8N8Z3 221 aa3.58□□□□□ -1.84
ATG4A-204ENST00000372246 DIRC1Q969H9 104 aa3.58□□□□□ -1.84
ATG4A-204ENST00000372246 SMIM29Q86T20 159 aa3.58□□□□□ -1.84
ATG4A-204ENST00000372246 RPL37AP8A6NKH3 93 aa3.57□□□□□ -1.84
ATG4A-204ENST00000372246 PSPHP1O15172 72 aa3.57□□□□□ -1.84
ATG4A-204ENST00000372246 COX7BP24311 80 aa3.57□□□□□ -1.84
ATG4A-204ENST00000372246 HELZ2Q9BYK8 2649 aaKnown RBP3.57□□□□□ -1.84
ATG4A-204ENST00000372246 HECTD1Q9ULT8 2610 aa3.57□□□□□ -1.84
ATG4A-204ENST00000372246 C8orf87E5RJ46 101 aa3.56□□□□□ -1.84
ATG4A-204ENST00000372246 DSCR9P59020 149 aa3.56□□□□□ -1.84
ATG4A-204ENST00000372246 DEFB113Q30KQ7 82 aa3.56□□□□□ -1.84
ATG4A-204ENST00000372246 WFDC10BQ8IUB3 73 aa3.56□□□□□ -1.84
ATG4A-204ENST00000372246 PRYO14603 147 aa3.56□□□□□ -1.84
ATG4A-204ENST00000372246 CXCL6P80162 114 aa3.56□□□□□ -1.84
ATG4A-204ENST00000372246 COX17Q14061 63 aa3.56□□□□□ -1.84
ATG4A-204ENST00000372246 Q6ZTC4 211 aa3.56□□□□□ -1.84
ATG4A-204ENST00000372246 ST20-AS1Q8NBB2 130 aa3.56□□□□□ -1.84
ATG4A-204ENST00000372246 KRTAP4-5Q9BYR2 181 aa3.56□□□□□ -1.84
ATG4A-204ENST00000372246 FAM168BA1KXE4 195 aa3.55□□□□□ -1.84
ATG4A-204ENST00000372246 C9orf66Q5T8R8 295 aa3.55□□□□□ -1.84
ATG4A-204ENST00000372246 OCR1Q9BZK8 76 aa3.55□□□□□ -1.84
ATG4A-204ENST00000372246 MAST4O15021 2626 aa3.55□□□□□ -1.84
ATG4A-204ENST00000372246 LYSTQ99698 3801 aa3.55□□□□□ -1.84
ATG4A-204ENST00000372246 FLNBO75369 2602 aaKnown RBP3.55□□□□□ -1.84
ATG4A-204ENST00000372246 ELOF1P60002 83 aaKnown RBP3.55□□□□□ -1.84
ATG4A-204ENST00000372246 SERTAD4-AS1Q5TG53 156 aa3.55□□□□□ -1.84
ATG4A-204ENST00000372246 Q6ZRP5 223 aa3.55□□□□□ -1.84
ATG4A-204ENST00000372246 FUSP35637 526 aaKnown RBP eCLIP3.54□□□□□ -1.84
ATG4A-204ENST00000372246 CAMK2N2Q96S95 79 aa3.54□□□□□ -1.84
ATG4A-204ENST00000372246 KRTAP3-1Q9BYR8 98 aa3.54□□□□□ -1.84
ATG4A-204ENST00000372246 NDUFC1O43677 76 aa3.54□□□□□ -1.84
ATG4A-204ENST00000372246 A0A0J9YWU9 116 aa3.53□□□□□ -1.84
ATG4A-204ENST00000372246 J3QKU1 62 aa3.53□□□□□ -1.84
ATG4A-204ENST00000372246 NDUFS5O43920 106 aa3.53□□□□□ -1.84
ATG4A-204ENST00000372246 IGHV4-30-4P0DP06 118 aa3.53□□□□□ -1.84
ATG4A-204ENST00000372246 Q8N377 158 aa3.53□□□□□ -1.84
ATG4A-204ENST00000372246 M0R378 163 aa3.53□□□□□ -1.84
ATG4A-204ENST00000372246 LINC00588Q9Y4M8 146 aa3.53□□□□□ -1.84
ATG4A-204ENST00000372246 NOTCH1P46531 2555 aa3.53□□□□□ -1.85
ATG4A-204ENST00000372246 A0A1W2PNM2 257 aa3.52□□□□□ -1.85
ATG4A-204ENST00000372246 K7EQZ3 153 aa3.52□□□□□ -1.85
ATG4A-204ENST00000372246 ERC2-IT1O76042 136 aa3.52□□□□□ -1.85
ATG4A-204ENST00000372246 ESRGQ1W209 222 aa3.52□□□□□ -1.85
ATG4A-204ENST00000372246 C1orf64Q8NEQ6 169 aa3.52□□□□□ -1.85
ATG4A-204ENST00000372246 COL6A5A8TX70 2615 aa3.52□□□□□ -1.85
ATG4A-204ENST00000372246 KRTAP1-1Q07627 177 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms