RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 SPANXDQ9BXN6 97 aa8.93□□□□□ -0.98
SS18L1-202ENST00000370848 KRTAP13-2Q52LG2 175 aa8.92□□□□□ -0.98
SS18L1-202ENST00000370848 SMCR5Q8TEV8 140 aa8.92□□□□□ -0.98
SS18L1-202ENST00000370848 TRAV23DV6A0A075B6W5 121 aa8.91□□□□□ -0.98
SS18L1-202ENST00000370848 B5MCH6 92 aa8.91□□□□□ -0.98
SS18L1-202ENST00000370848 CRYGAP11844 174 aa8.91□□□□□ -0.98
SS18L1-202ENST00000370848 HSBP1L1C9JCN9 74 aa8.9□□□□□ -0.98
SS18L1-202ENST00000370848 ERC2-IT1O76042 136 aa8.89□□□□□ -0.99
SS18L1-202ENST00000370848 S100A12P80511 92 aa8.89□□□□□ -0.99
SS18L1-202ENST00000370848 MUSTN1Q8IVN3 82 aa8.89□□□□□ -0.99
SS18L1-202ENST00000370848 OR13C6PQ8NH95 151 aa8.89□□□□□ -0.99
SS18L1-202ENST00000370848 SPRR4Q96PI1 79 aa8.89□□□□□ -0.99
SS18L1-202ENST00000370848 ZNF73O43830 326 aaPredicted RBP8.88□□□□□ -0.99
SS18L1-202ENST00000370848 FAM229BQ4G0N7 80 aa8.88□□□□□ -0.99
SS18L1-202ENST00000370848 TYMSOSQ8TAI1 123 aa8.88□□□□□ -0.99
SS18L1-202ENST00000370848 Q9BRP9 147 aa8.88□□□□□ -0.99
SS18L1-202ENST00000370848 IFITM1P13164 125 aa8.86□□□□□ -0.99
SS18L1-202ENST00000370848 Q6ZRX8 168 aa8.86□□□□□ -0.99
SS18L1-202ENST00000370848 C3orf22Q8N5N4 141 aa8.86□□□□□ -0.99
SS18L1-202ENST00000370848 PPDPFQ9H3Y8 114 aa8.86□□□□□ -0.99
SS18L1-202ENST00000370848 Q6ZVH6 145 aa8.84□□□□□ -0.99
SS18L1-202ENST00000370848 TMA7Q9Y2S6 64 aaKnown RBP8.84□□□□□ -0.99
SS18L1-202ENST00000370848 TSPAN13O95857 204 aa8.83□□□□□ -1
SS18L1-202ENST00000370848 LINC00518Q8N0U6 118 aa8.83□□□□□ -1
SS18L1-202ENST00000370848 ZNF706Q9Y5V0 76 aaPredicted RBP8.83□□□□□ -1
SS18L1-202ENST00000370848 PAM16Q9Y3D7 125 aa8.82□□□□□ -1
SS18L1-202ENST00000370848 COX8AP10176 69 aa8.81□□□□□ -1
SS18L1-202ENST00000370848 PRR4Q16378 134 aa8.81□□□□□ -1
SS18L1-202ENST00000370848 GAGE2AQ6NT46 116 aa8.81□□□□□ -1
SS18L1-202ENST00000370848 COPS9Q8WXC6 57 aa8.81□□□□□ -1
SS18L1-202ENST00000370848 JOSD1Q15040 202 aaPredicted RBP8.8□□□□□ -1
SS18L1-202ENST00000370848 C6orf99Q4VX62 202 aa8.8□□□□□ -1
SS18L1-202ENST00000370848 ST20-AS1Q8NBB2 130 aa8.8□□□□□ -1
SS18L1-202ENST00000370848 C14orf144Q96I85 54 aa8.8□□□□□ -1
SS18L1-202ENST00000370848 A6NDN8 102 aa8.79□□□□□ -1
SS18L1-202ENST00000370848 SPATA45Q537H7 98 aa8.79□□□□□ -1
SS18L1-202ENST00000370848 LINC00483Q53H64 154 aa8.79□□□□□ -1
SS18L1-202ENST00000370848 CTAG1AP78358 180 aa8.78□□□□□ -1
SS18L1-202ENST00000370848 LINC00304Q8N9R0 145 aa8.78□□□□□ -1
SS18L1-202ENST00000370848 CBY1Q9Y3M2 126 aa8.78□□□□□ -1
SS18L1-202ENST00000370848 FAT4Q6V0I7 4981 aa8.78□□□□□ -1
SS18L1-202ENST00000370848 A4D1N5 150 aa8.77□□□□□ -1.01
SS18L1-202ENST00000370848 COX7BP24311 80 aa8.77□□□□□ -1.01
SS18L1-202ENST00000370848 HINT1P49773 126 aaPredicted RBP8.77□□□□□ -1.01
SS18L1-202ENST00000370848 VAMP8Q9BV40 100 aa8.77□□□□□ -1.01
SS18L1-202ENST00000370848 MUC17Q685J3 4493 aa8.77□□□□□ -1.01
SS18L1-202ENST00000370848 ELOF1P60002 83 aaKnown RBP8.76□□□□□ -1.01
SS18L1-202ENST00000370848 DLEU1O43261 78 aa8.75□□□□□ -1.01
SS18L1-202ENST00000370848 PYY3Q5JQD4 70 aa8.75□□□□□ -1.01
SS18L1-202ENST00000370848 C12orf57Q99622 126 aa8.75□□□□□ -1.01
SS18L1-202ENST00000370848 IGLV9-49A0A0B4J1Y8 123 aa8.74□□□□□ -1.01
SS18L1-202ENST00000370848 TRAV13-2A0A0B4J235 113 aa8.74□□□□□ -1.01
SS18L1-202ENST00000370848 A0A0U1RQV1 116 aa8.74□□□□□ -1.01
SS18L1-202ENST00000370848 SMIM11BQ8TCY0 68 aa8.74□□□□□ -1.01
SS18L1-202ENST00000370848 HIST1H4GQ99525 98 aa8.74□□□□□ -1.01
SS18L1-202ENST00000370848 LCE2AQ5TA79 106 aaPredicted RBP8.73□□□□□ -1.01
SS18L1-202ENST00000370848 C2orf91Q6ZV80 131 aa8.73□□□□□ -1.01
SS18L1-202ENST00000370848 Q8NBF4 154 aa8.73□□□□□ -1.01
SS18L1-202ENST00000370848 MOBPQ13875 183 aa8.72□□□□□ -1.01
SS18L1-202ENST00000370848 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
SS18L1-202ENST00000370848 SLC25A34Q6PIV7 304 aa8.71□□□□□ -1.02
SS18L1-202ENST00000370848 RETNLBQ9BQ08 111 aa8.71□□□□□ -1.02
SS18L1-202ENST00000370848 TRBV7-6A0A0J9YX20 115 aa8.7□□□□□ -1.02
SS18L1-202ENST00000370848 A0A1B0GWB2 263 aa8.69□□□□□ -1.02
SS18L1-202ENST00000370848 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
SS18L1-202ENST00000370848 HIGD1BQ9P298 99 aa8.69□□□□□ -1.02
SS18L1-202ENST00000370848 SPRR1BP22528 89 aa8.67□□□□□ -1.02
SS18L1-202ENST00000370848 C9orf153Q5TBE3 101 aa8.67□□□□□ -1.02
SS18L1-202ENST00000370848 DEFB105AQ8NG35 78 aa8.67□□□□□ -1.02
SS18L1-202ENST00000370848 CFC1BP0CG36 223 aa8.64□□□□□ -1.03
SS18L1-202ENST00000370848 CFC1P0CG37 223 aa8.64□□□□□ -1.03
SS18L1-202ENST00000370848 LINC01547P58512 204 aaPredicted RBP8.64□□□□□ -1.03
SS18L1-202ENST00000370848 SPAG11AQ6PDA7 123 aa8.64□□□□□ -1.03
SS18L1-202ENST00000370848 SSBP3-AS1Q7Z2R9 100 aa8.64□□□□□ -1.03
SS18L1-202ENST00000370848 TAL2Q16559 108 aa8.63□□□□□ -1.03
SS18L1-202ENST00000370848 C4orf48Q5BLP8 95 aa8.63□□□□□ -1.03
SS18L1-202ENST00000370848 KRTAP9-2Q9BYQ4 174 aa8.63□□□□□ -1.03
SS18L1-202ENST00000370848 H7C2G1 150 aa8.62□□□□□ -1.03
SS18L1-202ENST00000370848 Q1RN00 199 aa8.62□□□□□ -1.03
SS18L1-202ENST00000370848 FXYD2P54710 66 aa8.61□□□□□ -1.03
SS18L1-202ENST00000370848 LINC00575Q6W349 94 aa8.61□□□□□ -1.03
SS18L1-202ENST00000370848 CEND1Q8N111 149 aa8.61□□□□□ -1.03
SS18L1-202ENST00000370848 IGLV5-48A0A075B6I7 105 aa8.6□□□□□ -1.03
SS18L1-202ENST00000370848 TEX49A0A1B0GTD5 131 aa8.6□□□□□ -1.03
SS18L1-202ENST00000370848 SMIM29Q86T20 159 aa8.6□□□□□ -1.03
SS18L1-202ENST00000370848 RAB37Q96AX2 223 aa8.6□□□□□ -1.03
SS18L1-202ENST00000370848 LAMTOR3Q9UHA4 124 aa8.6□□□□□ -1.03
SS18L1-202ENST00000370848 A0A0B4J2C4 111 aa8.59□□□□□ -1.03
SS18L1-202ENST00000370848 SPINK1P00995 79 aa8.59□□□□□ -1.03
SS18L1-202ENST00000370848 VAMP3Q15836 100 aa8.59□□□□□ -1.03
SS18L1-202ENST00000370848 SMIM6P0DI80 62 aa8.58□□□□□ -1.04
SS18L1-202ENST00000370848 Q8N377 158 aa8.58□□□□□ -1.04
SS18L1-202ENST00000370848 NHP2Q9NX24 153 aaKnown RBP8.58□□□□□ -1.04
SS18L1-202ENST00000370848 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
SS18L1-202ENST00000370848 A0A0G2JQZ4 141 aa8.56□□□□□ -1.04
SS18L1-202ENST00000370848 hADV29S1A0JD25 119 aa8.56□□□□□ -1.04
SS18L1-202ENST00000370848 SLC25A20O43772 301 aa8.56□□□□□ -1.04
SS18L1-202ENST00000370848 HRCT1Q6UXD1 115 aa8.56□□□□□ -1.04
SS18L1-202ENST00000370848 Q6ZQY7 126 aa8.56□□□□□ -1.04
SS18L1-202ENST00000370848 CDIP1Q9H305 208 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms