RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 IGLV1-50A0A075B6I6 118 aa9.6□□□□□ -0.87
PRPF38B-202ENST00000370022 RPL37AP8A6NKH3 93 aa9.6□□□□□ -0.87
PRPF38B-202ENST00000370022 EIF4EBP3O60516 100 aaPredicted RBP9.6□□□□□ -0.87
PRPF38B-202ENST00000370022 SPCS1Q9Y6A9 102 aa9.6□□□□□ -0.87
PRPF38B-202ENST00000370022 NCR3O14931 201 aa9.59□□□□□ -0.87
PRPF38B-202ENST00000370022 SRSF9Q13242 221 aaKnown RBP eCLIP9.59□□□□□ -0.87
PRPF38B-202ENST00000370022 C1orf137Q5JT78 98 aa9.59□□□□□ -0.87
PRPF38B-202ENST00000370022 IGKV2-28A0A075B6P5 120 aa9.58□□□□□ -0.88
PRPF38B-202ENST00000370022 IGKV2D-28P01615 120 aa9.58□□□□□ -0.88
PRPF38B-202ENST00000370022 VPS13BQ7Z7G8 4022 aa9.58□□□□□ -0.88
PRPF38B-202ENST00000370022 MUSTN1Q8IVN3 82 aa9.57□□□□□ -0.88
PRPF38B-202ENST00000370022 HIGD1BQ9P298 99 aa9.57□□□□□ -0.88
PRPF38B-202ENST00000370022 H3BUT2 72 aa9.56□□□□□ -0.88
PRPF38B-202ENST00000370022 C2orf91Q6ZV80 131 aa9.56□□□□□ -0.88
PRPF38B-202ENST00000370022 IGLV7-43P04211 117 aa9.55□□□□□ -0.88
PRPF38B-202ENST00000370022 INAFM2P0DMQ5 153 aa9.55□□□□□ -0.88
PRPF38B-202ENST00000370022 BCE1O60756 84 aa9.54□□□□□ -0.88
PRPF38B-202ENST00000370022 S100A7L2Q5SY68 101 aa9.54□□□□□ -0.88
PRPF38B-202ENST00000370022 REG3GQ6UW15 175 aa9.54□□□□□ -0.88
PRPF38B-202ENST00000370022 TRBV10-3A0A0K0K1G6 114 aa9.54□□□□□ -0.88
PRPF38B-202ENST00000370022 IGLV6-57P01721 117 aa9.54□□□□□ -0.88
PRPF38B-202ENST00000370022 HIST1H4GQ99525 98 aa9.54□□□□□ -0.88
PRPF38B-202ENST00000370022 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
PRPF38B-202ENST00000370022 KCNQ1DNQ9H478 68 aa9.54□□□□□ -0.88
PRPF38B-202ENST00000370022 PRYO14603 147 aa9.53□□□□□ -0.88
PRPF38B-202ENST00000370022 SPINK6Q6UWN8 80 aa9.53□□□□□ -0.88
PRPF38B-202ENST00000370022 ZNF861PO60384 105 aa9.5□□□□□ -0.89
PRPF38B-202ENST00000370022 SPRR1AP35321 89 aa9.5□□□□□ -0.89
PRPF38B-202ENST00000370022 RPL28P46779 137 aaKnown RBP9.5□□□□□ -0.89
PRPF38B-202ENST00000370022 TAL2Q16559 108 aa9.5□□□□□ -0.89
PRPF38B-202ENST00000370022 SS18L2Q9UHA2 77 aa9.5□□□□□ -0.89
PRPF38B-202ENST00000370022 LINC00337Q8N6G1 96 aa9.49□□□□□ -0.89
PRPF38B-202ENST00000370022 OR13C6PQ8NH95 151 aa9.49□□□□□ -0.89
PRPF38B-202ENST00000370022 SRRM2Q9UQ35 2752 aaKnown RBP9.48□□□□□ -0.89
PRPF38B-202ENST00000370022 TRAV23DV6A0A075B6W5 121 aa9.48□□□□□ -0.89
PRPF38B-202ENST00000370022 A4D1N5 150 aa9.48□□□□□ -0.89
PRPF38B-202ENST00000370022 UBE2AP49459 152 aa9.48□□□□□ -0.89
PRPF38B-202ENST00000370022 TRAV13-2A0A0B4J235 113 aa9.47□□□□□ -0.89
PRPF38B-202ENST00000370022 FAM19A1Q7Z5A9 133 aa9.47□□□□□ -0.89
PRPF38B-202ENST00000370022 DIRC1Q969H9 104 aa9.47□□□□□ -0.89
PRPF38B-202ENST00000370022 H0Y9J4 135 aa9.46□□□□□ -0.89
PRPF38B-202ENST00000370022 KRTAP13-1Q8IUC0 172 aa9.46□□□□□ -0.89
PRPF38B-202ENST00000370022 ANAPC13Q9BS18 74 aa9.46□□□□□ -0.89
PRPF38B-202ENST00000370022 ETDCA0A1B0GVM5 59 aa9.45□□□□□ -0.9
PRPF38B-202ENST00000370022 KRTAP4-16G5E9R7 235 aaPredicted RBP9.45□□□□□ -0.9
PRPF38B-202ENST00000370022 ZNF73O43830 326 aaPredicted RBP9.44□□□□□ -0.9
PRPF38B-202ENST00000370022 CEND1Q8N111 149 aa9.44□□□□□ -0.9
PRPF38B-202ENST00000370022 PRLHP81277 87 aa9.43□□□□□ -0.9
PRPF38B-202ENST00000370022 C5orf47Q569G3 176 aa9.42□□□□□ -0.9
PRPF38B-202ENST00000370022 CDIP1Q9H305 208 aa9.41□□□□□ -0.9
PRPF38B-202ENST00000370022 B5MCH6 92 aa9.41□□□□□ -0.9
PRPF38B-202ENST00000370022 H3BMG7 143 aa9.41□□□□□ -0.9
PRPF38B-202ENST00000370022 Q6Q795 121 aa9.4□□□□□ -0.9
PRPF38B-202ENST00000370022 Q6ZRX8 168 aa9.4□□□□□ -0.9
PRPF38B-202ENST00000370022 SMIM20Q8N5G0 67 aa9.4□□□□□ -0.9
PRPF38B-202ENST00000370022 OXTP01178 125 aa9.39□□□□□ -0.91
PRPF38B-202ENST00000370022 PRO0461Q9UI25 63 aa9.39□□□□□ -0.91
PRPF38B-202ENST00000370022 A0A0B4J2C4 111 aa9.38□□□□□ -0.91
PRPF38B-202ENST00000370022 HIGD2AQ9BW72 106 aa9.38□□□□□ -0.91
PRPF38B-202ENST00000370022 PKHD1L1Q86WI1 4243 aa9.38□□□□□ -0.91
PRPF38B-202ENST00000370022 TRBV7-6A0A0J9YX20 115 aa9.37□□□□□ -0.91
PRPF38B-202ENST00000370022 CFC1BP0CG36 223 aa9.37□□□□□ -0.91
PRPF38B-202ENST00000370022 CFC1P0CG37 223 aa9.37□□□□□ -0.91
PRPF38B-202ENST00000370022 ETDBQ3ZM63 59 aa9.37□□□□□ -0.91
PRPF38B-202ENST00000370022 C6orf99Q4VX62 202 aa9.37□□□□□ -0.91
PRPF38B-202ENST00000370022 RAB37Q96AX2 223 aa9.37□□□□□ -0.91
PRPF38B-202ENST00000370022 KRTAP29-1A8MX34 341 aaPredicted RBP9.37□□□□□ -0.91
PRPF38B-202ENST00000370022 FXYD2P54710 66 aa9.37□□□□□ -0.91
PRPF38B-202ENST00000370022 RPL13AP40429 203 aaKnown RBP9.36□□□□□ -0.91
PRPF38B-202ENST00000370022 SMIM11BQ8TCY0 68 aa9.36□□□□□ -0.91
PRPF38B-202ENST00000370022 ELOF1P60002 83 aaKnown RBP9.35□□□□□ -0.91
PRPF38B-202ENST00000370022 LINC01600Q96MT4 127 aa9.35□□□□□ -0.91
PRPF38B-202ENST00000370022 A0A1B0GWB2 263 aa9.34□□□□□ -0.91
PRPF38B-202ENST00000370022 MT-ATP8P03928 68 aa9.34□□□□□ -0.91
PRPF38B-202ENST00000370022 COX7BP24311 80 aa9.34□□□□□ -0.91
PRPF38B-202ENST00000370022 SMCR5Q8TEV8 140 aa9.34□□□□□ -0.91
PRPF38B-202ENST00000370022 PPDPFLQ8WWR9 84 aa9.34□□□□□ -0.91
PRPF38B-202ENST00000370022 FLG2Q5D862 2391 aaPredicted RBP9.33□□□□□ -0.92
PRPF38B-202ENST00000370022 NAA38Q9BRA0 125 aaKnown RBP9.33□□□□□ -0.92
PRPF38B-202ENST00000370022 Q9BRP9 147 aa9.33□□□□□ -0.92
PRPF38B-202ENST00000370022 ZNF706Q9Y5V0 76 aaPredicted RBP9.33□□□□□ -0.92
PRPF38B-202ENST00000370022 KRTAP1-4P0C5Y4 121 aa9.33□□□□□ -0.92
PRPF38B-202ENST00000370022 DHRS4-AS1Q9P1J3 65 aa9.33□□□□□ -0.92
PRPF38B-202ENST00000370022 PRO1854Q9UHT4 67 aa9.33□□□□□ -0.92
PRPF38B-202ENST00000370022 HERC1Q15751 4861 aa9.32□□□□□ -0.92
PRPF38B-202ENST00000370022 NDUFV3P56181 108 aaKnown RBP9.31□□□□□ -0.92
PRPF38B-202ENST00000370022 LYRM7Q5U5X0 104 aa9.31□□□□□ -0.92
PRPF38B-202ENST00000370022 NHP2Q9NX24 153 aaKnown RBP9.31□□□□□ -0.92
PRPF38B-202ENST00000370022 MYCBP2O75592 4640 aa9.31□□□□□ -0.92
PRPF38B-202ENST00000370022 J3QL48 77 aa9.29□□□□□ -0.92
PRPF38B-202ENST00000370022 H7C2G1 150 aa9.29□□□□□ -0.92
PRPF38B-202ENST00000370022 SPRR4Q96PI1 79 aa9.29□□□□□ -0.92
PRPF38B-202ENST00000370022 ERC2-IT1O76042 136 aa9.28□□□□□ -0.92
PRPF38B-202ENST00000370022 FAM229BQ4G0N7 80 aa9.28□□□□□ -0.92
PRPF38B-202ENST00000370022 TEN1Q86WV5 123 aa9.28□□□□□ -0.92
PRPF38B-202ENST00000370022 Q1RN00 199 aa9.27□□□□□ -0.93
PRPF38B-202ENST00000370022 DMBT1Q9UGM3 2413 aaPredicted RBP9.27□□□□□ -0.93
PRPF38B-202ENST00000370022 CRYGAP11844 174 aa9.26□□□□□ -0.93
PRPF38B-202ENST00000370022 LRP1Q07954 4544 aaKnown RBP9.25□□□□□ -0.93
PRPF38B-202ENST00000370022 SLC25A20O43772 301 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms