RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 DNAJC9-AS1A6NH13 148 aa11.67□□□□□ -0.54
CHTOP-201ENST00000368686 C16orf90A8MZG2 172 aa11.67□□□□□ -0.54
CHTOP-201ENST00000368686 Q8N9P0 234 aaPredicted RBP11.67□□□□□ -0.54
CHTOP-201ENST00000368686 USP9YO00507 2555 aaPredicted RBP11.66□□□□□ -0.54
CHTOP-201ENST00000368686 SPANXA2-OT1Q8N9U9 137 aa11.66□□□□□ -0.54
CHTOP-201ENST00000368686 PRB2P02812 416 aaPredicted RBP11.66□□□□□ -0.54
CHTOP-201ENST00000368686 RBM12B-AS1Q9P1G2 102 aa11.65□□□□□ -0.54
CHTOP-201ENST00000368686 LINC00208Q96KT6 92 aa11.65□□□□□ -0.55
CHTOP-201ENST00000368686 Q9BRP9 147 aa11.64□□□□□ -0.55
CHTOP-201ENST00000368686 ATP11AUNQ6ZP68 121 aa11.63□□□□□ -0.55
CHTOP-201ENST00000368686 CUBNO60494 3623 aa11.63□□□□□ -0.55
CHTOP-201ENST00000368686 FN1P02751 2386 aaKnown RBP11.63□□□□□ -0.55
CHTOP-201ENST00000368686 NKAPP1Q8N9T2 125 aa11.63□□□□□ -0.55
CHTOP-201ENST00000368686 NDUFS5O43920 106 aa11.62□□□□□ -0.55
CHTOP-201ENST00000368686 KMT2BQ9UMN6 2715 aaPredicted RBP11.62□□□□□ -0.55
CHTOP-201ENST00000368686 PRR15LQ9BU68 103 aa11.62□□□□□ -0.55
CHTOP-201ENST00000368686 ANKRD17O75179 2603 aaKnown RBP11.61□□□□□ -0.55
CHTOP-201ENST00000368686 Q6ZRX8 168 aa11.61□□□□□ -0.55
CHTOP-201ENST00000368686 DEFB4AO15263 64 aa11.61□□□□□ -0.55
CHTOP-201ENST00000368686 USP9XQ93008 2570 aaPredicted RBP11.61□□□□□ -0.55
CHTOP-201ENST00000368686 PTPN13Q12923 2485 aa11.6□□□□□ -0.55
CHTOP-201ENST00000368686 H3BPC8 53 aa11.59□□□□□ -0.55
CHTOP-201ENST00000368686 Q75L30 129 aa11.59□□□□□ -0.55
CHTOP-201ENST00000368686 SPTSSBQ8NFR3 76 aa11.59□□□□□ -0.55
CHTOP-201ENST00000368686 C7orf33Q8WU49 177 aa11.59□□□□□ -0.55
CHTOP-201ENST00000368686 PKD1L2Q7Z442 2459 aa11.58□□□□□ -0.56
CHTOP-201ENST00000368686 C15orf56Q8N910 161 aa11.58□□□□□ -0.56
CHTOP-201ENST00000368686 APCP25054 2843 aa11.57□□□□□ -0.56
CHTOP-201ENST00000368686 PHF5AQ7RTV0 110 aaKnown RBP11.57□□□□□ -0.56
CHTOP-201ENST00000368686 KRTAP26-1Q6PEX3 210 aa11.56□□□□□ -0.56
CHTOP-201ENST00000368686 DOPEY1Q5JWR5 2465 aa11.56□□□□□ -0.56
CHTOP-201ENST00000368686 LCA10Q71F78 164 aa11.55□□□□□ -0.56
CHTOP-201ENST00000368686 FBN2P35556 2912 aa11.55□□□□□ -0.56
CHTOP-201ENST00000368686 HTN3P15516 51 aa11.55□□□□□ -0.56
CHTOP-201ENST00000368686 WFDC13Q8IUB5 93 aa11.55□□□□□ -0.56
CHTOP-201ENST00000368686 LOC101927531A0A1B0GV80 90 aa11.54□□□□□ -0.56
CHTOP-201ENST00000368686 A6NN06 94 aa11.54□□□□□ -0.56
CHTOP-201ENST00000368686 DEFB135Q30KP9 77 aa11.54□□□□□ -0.56
CHTOP-201ENST00000368686 DEFB113Q30KQ7 82 aa11.54□□□□□ -0.56
CHTOP-201ENST00000368686 KRTAP4-16G5E9R7 235 aaPredicted RBP11.53□□□□□ -0.56
CHTOP-201ENST00000368686 SERTAD4-AS1Q5TG53 156 aa11.53□□□□□ -0.56
CHTOP-201ENST00000368686 A6NED7 52 aa11.53□□□□□ -0.56
CHTOP-201ENST00000368686 IGKV2D-24A0A075B6R9 120 aa11.52□□□□□ -0.57
CHTOP-201ENST00000368686 H0Y9P7 68 aa11.52□□□□□ -0.57
CHTOP-201ENST00000368686 SPRR1AP35321 89 aa11.51□□□□□ -0.57
CHTOP-201ENST00000368686 SPART-AS1P0CW21 52 aa11.49□□□□□ -0.57
CHTOP-201ENST00000368686 DEFB116Q30KQ4 102 aa11.49□□□□□ -0.57
CHTOP-201ENST00000368686 WFDC10BQ8IUB3 73 aa11.49□□□□□ -0.57
CHTOP-201ENST00000368686 NIPBLQ6KC79 2804 aaeCLIP11.49□□□□□ -0.57
CHTOP-201ENST00000368686 TEX15Q9BXT5 2789 aa11.49□□□□□ -0.57
CHTOP-201ENST00000368686 ZFYVE26Q68DK2 2539 aa11.49□□□□□ -0.57
CHTOP-201ENST00000368686 CDC42SE1Q9NRR8 79 aa11.49□□□□□ -0.57
CHTOP-201ENST00000368686 PLA2G2DQ9UNK4 145 aa11.49□□□□□ -0.57
CHTOP-201ENST00000368686 UTP20O75691 2785 aaKnown RBP11.49□□□□□ -0.57
CHTOP-201ENST00000368686 KRTAP29-1A8MX34 341 aaPredicted RBP11.48□□□□□ -0.57
CHTOP-201ENST00000368686 Q8NAQ8 132 aa11.47□□□□□ -0.57
CHTOP-201ENST00000368686 LINC00476Q8WZB0 136 aa11.47□□□□□ -0.57
CHTOP-201ENST00000368686 FAM208BQ5VWN6 2430 aa11.47□□□□□ -0.57
CHTOP-201ENST00000368686 IGLV1-50A0A075B6I6 118 aa11.47□□□□□ -0.57
CHTOP-201ENST00000368686 RPL37AP8A6NKH3 93 aa11.46□□□□□ -0.57
CHTOP-201ENST00000368686 APOC4P55056 127 aa11.46□□□□□ -0.57
CHTOP-201ENST00000368686 C9orf163Q8N9P6 203 aa11.46□□□□□ -0.57
CHTOP-201ENST00000368686 LRRK2Q5S007 2527 aa11.46□□□□□ -0.58
CHTOP-201ENST00000368686 GCN1Q92616 2671 aaKnown RBP11.45□□□□□ -0.58
CHTOP-201ENST00000368686 NBEAL2Q6ZNJ1 2754 aa11.45□□□□□ -0.58
CHTOP-201ENST00000368686 C7orf65Q6ZTY9 151 aa11.44□□□□□ -0.58
CHTOP-201ENST00000368686 KRTAP10-9P60411 292 aa11.44□□□□□ -0.58
CHTOP-201ENST00000368686 COA5Q86WW8 74 aa11.44□□□□□ -0.58
CHTOP-201ENST00000368686 IGLV5-37A0A075B6J1 123 aa11.43□□□□□ -0.58
CHTOP-201ENST00000368686 POLQO75417 2590 aa11.42□□□□□ -0.58
CHTOP-201ENST00000368686 CASC2Q6XLA1 102 aa11.42□□□□□ -0.58
CHTOP-201ENST00000368686 KRTAP1-3Q8IUG1 177 aa11.42□□□□□ -0.58
CHTOP-201ENST00000368686 TLX1NBP0CAT3 122 aa11.41□□□□□ -0.58
CHTOP-201ENST00000368686 IGFL1Q6UW32 110 aa11.41□□□□□ -0.58
CHTOP-201ENST00000368686 IGSF10Q6WRI0 2623 aa11.41□□□□□ -0.58
CHTOP-201ENST00000368686 CFAP46Q8IYW2 2715 aa11.4□□□□□ -0.58
CHTOP-201ENST00000368686 NAV2Q8IVL1 2488 aa11.4□□□□□ -0.59
CHTOP-201ENST00000368686 IGLV7-46A0A075B6I9 117 aa11.38□□□□□ -0.59
CHTOP-201ENST00000368686 A0A087WSZ3 146 aa11.38□□□□□ -0.59
CHTOP-201ENST00000368686 RPL37AP61513 92 aaKnown RBP11.37□□□□□ -0.59
CHTOP-201ENST00000368686 LINC01558Q9Y6Z2 57 aa11.36□□□□□ -0.59
CHTOP-201ENST00000368686 NF1P21359 2839 aa11.35□□□□□ -0.59
CHTOP-201ENST00000368686 FAM168BA1KXE4 195 aa11.35□□□□□ -0.59
CHTOP-201ENST00000368686 MOBPQ13875 183 aa11.35□□□□□ -0.59
CHTOP-201ENST00000368686 A0A0G2JQZ4 141 aa11.34□□□□□ -0.59
CHTOP-201ENST00000368686 A0A1W2PNN7 141 aa11.34□□□□□ -0.59
CHTOP-201ENST00000368686 IGLV8-61A0A075B6I0 122 aa11.34□□□□□ -0.59
CHTOP-201ENST00000368686 CNBPP62633 177 aaKnown RBP11.34□□□□□ -0.59
CHTOP-201ENST00000368686 SONP18583 2426 aaKnown RBP11.33□□□□□ -0.6
CHTOP-201ENST00000368686 H3BNG1 76 aa11.33□□□□□ -0.6
CHTOP-201ENST00000368686 PLAC8Q9NZF1 115 aa11.33□□□□□ -0.6
CHTOP-201ENST00000368686 FLNCQ14315 2725 aa11.33□□□□□ -0.6
CHTOP-201ENST00000368686 SETD2Q9BYW2 2564 aaPredicted RBP11.33□□□□□ -0.6
CHTOP-201ENST00000368686 A8MWP4 228 aa11.3□□□□□ -0.6
CHTOP-201ENST00000368686 REG3GQ6UW15 175 aa11.29□□□□□ -0.6
CHTOP-201ENST00000368686 KRTAP7-1Q8IUC3 87 aa11.29□□□□□ -0.6
CHTOP-201ENST00000368686 LINC01556Q5JQF7 62 aa11.28□□□□□ -0.6
CHTOP-201ENST00000368686 SPAG11AQ6PDA7 123 aa11.26□□□□□ -0.61
CHTOP-201ENST00000368686 KRTAP10-3P60369 221 aa11.24□□□□□ -0.61
CHTOP-201ENST00000368686 HIVEP2P31629 2446 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms