RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 KCNQ1DNQ9H478 68 aa8.48□□□□□ -1.05
TPM3-211ENST00000368531 FAT1Q14517 4588 aa8.48□□□□□ -1.05
TPM3-211ENST00000368531 SPINK6Q6UWN8 80 aa8.47□□□□□ -1.05
TPM3-211ENST00000368531 HERC2O95714 4834 aa8.47□□□□□ -1.05
TPM3-211ENST00000368531 TRAV23DV6A0A075B6W5 121 aa8.46□□□□□ -1.06
TPM3-211ENST00000368531 ETDCA0A1B0GVM5 59 aa8.46□□□□□ -1.06
TPM3-211ENST00000368531 ZNF861PO60384 105 aa8.46□□□□□ -1.06
TPM3-211ENST00000368531 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.06
TPM3-211ENST00000368531 TAL2Q16559 108 aa8.45□□□□□ -1.06
TPM3-211ENST00000368531 CEND1Q8N111 149 aa8.45□□□□□ -1.06
TPM3-211ENST00000368531 TRAV13-2A0A0B4J235 113 aa8.44□□□□□ -1.06
TPM3-211ENST00000368531 SPRR1AP35321 89 aa8.44□□□□□ -1.06
TPM3-211ENST00000368531 DIRC1Q969H9 104 aa8.44□□□□□ -1.06
TPM3-211ENST00000368531 ZNF73O43830 326 aaPredicted RBP8.43□□□□□ -1.06
TPM3-211ENST00000368531 CBY1Q9Y3M2 126 aa8.43□□□□□ -1.06
TPM3-211ENST00000368531 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
TPM3-211ENST00000368531 HSD52Q0P140 79 aa8.42□□□□□ -1.06
TPM3-211ENST00000368531 KRTAP13-1Q8IUC0 172 aa8.42□□□□□ -1.06
TPM3-211ENST00000368531 HIGD2AQ9BW72 106 aa8.42□□□□□ -1.06
TPM3-211ENST00000368531 B5MCH6 92 aa8.41□□□□□ -1.06
TPM3-211ENST00000368531 H0Y9J4 135 aa8.41□□□□□ -1.06
TPM3-211ENST00000368531 RPL13AP40429 203 aaKnown RBP8.41□□□□□ -1.06
TPM3-211ENST00000368531 FXYD2P54710 66 aa8.41□□□□□ -1.06
TPM3-211ENST00000368531 VPS13BQ7Z7G8 4022 aa8.4□□□□□ -1.06
TPM3-211ENST00000368531 H7C2G1 150 aa8.4□□□□□ -1.06
TPM3-211ENST00000368531 CFC1BP0CG36 223 aa8.4□□□□□ -1.06
TPM3-211ENST00000368531 CFC1P0CG37 223 aa8.4□□□□□ -1.06
TPM3-211ENST00000368531 HINT1P49773 126 aaPredicted RBP8.4□□□□□ -1.06
TPM3-211ENST00000368531 C6orf99Q4VX62 202 aa8.4□□□□□ -1.06
TPM3-211ENST00000368531 SMIM11BQ8TCY0 68 aa8.4□□□□□ -1.06
TPM3-211ENST00000368531 RAB37Q96AX2 223 aa8.4□□□□□ -1.06
TPM3-211ENST00000368531 SRRM2Q9UQ35 2752 aaKnown RBP8.39□□□□□ -1.07
TPM3-211ENST00000368531 TSTD3H0UI37 97 aa8.39□□□□□ -1.07
TPM3-211ENST00000368531 TMEM238LA0A1B0GVL6 79 aa8.38□□□□□ -1.07
TPM3-211ENST00000368531 A6NJY4 79 aa8.38□□□□□ -1.07
TPM3-211ENST00000368531 Q6ZRX8 168 aa8.38□□□□□ -1.07
TPM3-211ENST00000368531 SMCR5Q8TEV8 140 aa8.38□□□□□ -1.07
TPM3-211ENST00000368531 COX7BP24311 80 aa8.37□□□□□ -1.07
TPM3-211ENST00000368531 CTAG1AP78358 180 aa8.37□□□□□ -1.07
TPM3-211ENST00000368531 FLG2Q5D862 2391 aaPredicted RBP8.37□□□□□ -1.07
TPM3-211ENST00000368531 A0A0B4J2C4 111 aa8.36□□□□□ -1.07
TPM3-211ENST00000368531 Q9BRP9 147 aa8.36□□□□□ -1.07
TPM3-211ENST00000368531 NHP2Q9NX24 153 aaKnown RBP8.36□□□□□ -1.07
TPM3-211ENST00000368531 ERC2-IT1O76042 136 aa8.35□□□□□ -1.07
TPM3-211ENST00000368531 BVES-AS1Q5T3Y7 98 aa8.34□□□□□ -1.07
TPM3-211ENST00000368531 ANAPC11Q9NYG5 84 aa8.34□□□□□ -1.07
TPM3-211ENST00000368531 PRO1854Q9UHT4 67 aa8.34□□□□□ -1.07
TPM3-211ENST00000368531 K7ERJ3 54 aa8.33□□□□□ -1.08
TPM3-211ENST00000368531 OXTP01178 125 aa8.33□□□□□ -1.08
TPM3-211ENST00000368531 ELOF1P60002 83 aaKnown RBP8.33□□□□□ -1.08
TPM3-211ENST00000368531 Q1RN00 199 aa8.33□□□□□ -1.08
TPM3-211ENST00000368531 KRTAP29-1A8MX34 341 aaPredicted RBP8.32□□□□□ -1.08
TPM3-211ENST00000368531 KRTAP1-4P0C5Y4 121 aa8.32□□□□□ -1.08
TPM3-211ENST00000368531 LINC01600Q96MT4 127 aa8.32□□□□□ -1.08
TPM3-211ENST00000368531 TRBV7-6A0A0J9YX20 115 aa8.31□□□□□ -1.08
TPM3-211ENST00000368531 A0A1B0GWB2 263 aa8.31□□□□□ -1.08
TPM3-211ENST00000368531 VAMP3Q15836 100 aa8.31□□□□□ -1.08
TPM3-211ENST00000368531 PRR26Q8N8Z3 221 aa8.31□□□□□ -1.08
TPM3-211ENST00000368531 PKHD1L1Q86WI1 4243 aa8.31□□□□□ -1.08
TPM3-211ENST00000368531 SPRR4Q96PI1 79 aa8.3□□□□□ -1.08
TPM3-211ENST00000368531 M0R143 59 aa8.29□□□□□ -1.08
TPM3-211ENST00000368531 GAGE2AQ6NT46 116 aa8.29□□□□□ -1.08
TPM3-211ENST00000368531 ST20-AS1Q8NBB2 130 aa8.29□□□□□ -1.08
TPM3-211ENST00000368531 DHRS4-AS1Q9P1J3 65 aa8.29□□□□□ -1.08
TPM3-211ENST00000368531 ZNF706Q9Y5V0 76 aaPredicted RBP8.29□□□□□ -1.08
TPM3-211ENST00000368531 BATFQ16520 125 aa8.27□□□□□ -1.09
TPM3-211ENST00000368531 A0A087X002 238 aa8.26□□□□□ -1.09
TPM3-211ENST00000368531 SLC25A20O43772 301 aa8.26□□□□□ -1.09
TPM3-211ENST00000368531 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
TPM3-211ENST00000368531 DEFB105AQ8NG35 78 aa8.26□□□□□ -1.09
TPM3-211ENST00000368531 CRYGAP11844 174 aa8.25□□□□□ -1.09
TPM3-211ENST00000368531 PSMB2P49721 201 aa8.25□□□□□ -1.09
TPM3-211ENST00000368531 LINC00575Q6W349 94 aa8.25□□□□□ -1.09
TPM3-211ENST00000368531 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
TPM3-211ENST00000368531 TSPAN13O95857 204 aa8.24□□□□□ -1.09
TPM3-211ENST00000368531 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
TPM3-211ENST00000368531 TRIAP1O43715 76 aa8.23□□□□□ -1.09
TPM3-211ENST00000368531 FAM229BQ4G0N7 80 aa8.23□□□□□ -1.09
TPM3-211ENST00000368531 hADV29S1A0JD25 119 aa8.22□□□□□ -1.09
TPM3-211ENST00000368531 C3orf22Q8N5N4 141 aa8.22□□□□□ -1.09
TPM3-211ENST00000368531 H0YGX0 51 aa8.21□□□□□ -1.1
TPM3-211ENST00000368531 KRTAP13-2Q52LG2 175 aa8.21□□□□□ -1.1
TPM3-211ENST00000368531 TYMSOSQ8TAI1 123 aa8.21□□□□□ -1.1
TPM3-211ENST00000368531 IGLV9-49A0A0B4J1Y8 123 aa8.2□□□□□ -1.1
TPM3-211ENST00000368531 PCP4L1A6NKN8 68 aa8.2□□□□□ -1.1
TPM3-211ENST00000368531 LINC00483Q53H64 154 aa8.2□□□□□ -1.1
TPM3-211ENST00000368531 FAM218AQ96MZ4 157 aa8.2□□□□□ -1.1
TPM3-211ENST00000368531 CLEC2BQ92478 149 aa8.19□□□□□ -1.1
TPM3-211ENST00000368531 NAA38Q9BRA0 125 aaKnown RBP8.19□□□□□ -1.1
TPM3-211ENST00000368531 LRP1Q07954 4544 aaKnown RBP8.18□□□□□ -1.1
TPM3-211ENST00000368531 COX6CP09669 75 aa8.18□□□□□ -1.1
TPM3-211ENST00000368531 SCGB1C2P0DMR2 95 aa8.18□□□□□ -1.1
TPM3-211ENST00000368531 Q6ZQY7 126 aa8.18□□□□□ -1.1
TPM3-211ENST00000368531 TEX49A0A1B0GTD5 131 aa8.17□□□□□ -1.1
TPM3-211ENST00000368531 SNCGO76070 127 aa8.17□□□□□ -1.1
TPM3-211ENST00000368531 SPRR1BP22528 89 aa8.16□□□□□ -1.1
TPM3-211ENST00000368531 LINC01547P58512 204 aaPredicted RBP8.16□□□□□ -1.1
TPM3-211ENST00000368531 MOBPQ13875 183 aa8.16□□□□□ -1.1
TPM3-211ENST00000368531 C9orf153Q5TBE3 101 aa8.16□□□□□ -1.1
TPM3-211ENST00000368531 IGLV5-48A0A075B6I7 105 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms