RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 TRAV23DV6A0A075B6W5 121 aa10.95□□□□□ -0.66
CKS1B-203ENST00000368439 LINC00483Q53H64 154 aa10.95□□□□□ -0.66
CKS1B-203ENST00000368439 ANKRD39Q53RE8 183 aa10.95□□□□□ -0.66
CKS1B-203ENST00000368439 Q6ZRX8 168 aa10.95□□□□□ -0.66
CKS1B-203ENST00000368439 S100A1P23297 94 aa10.94□□□□□ -0.66
CKS1B-203ENST00000368439 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
CKS1B-203ENST00000368439 C20orf202A1L168 122 aa10.93□□□□□ -0.66
CKS1B-203ENST00000368439 CTAG1AP78358 180 aa10.93□□□□□ -0.66
CKS1B-203ENST00000368439 PPDPFQ9H3Y8 114 aa10.93□□□□□ -0.66
CKS1B-203ENST00000368439 ATOH7Q8N100 152 aa10.92□□□□□ -0.66
CKS1B-203ENST00000368439 ZNF73O43830 326 aaPredicted RBP10.91□□□□□ -0.66
CKS1B-203ENST00000368439 HIST3H2BBQ8N257 126 aa10.9□□□□□ -0.66
CKS1B-203ENST00000368439 RETNLBQ9BQ08 111 aa10.9□□□□□ -0.66
CKS1B-203ENST00000368439 GAGE2AQ6NT46 116 aa10.89□□□□□ -0.67
CKS1B-203ENST00000368439 SPANXDQ9BXN6 97 aa10.89□□□□□ -0.67
CKS1B-203ENST00000368439 HIST1H2BLQ99880 126 aa10.88□□□□□ -0.67
CKS1B-203ENST00000368439 SPAG11AQ6PDA7 123 aa10.87□□□□□ -0.67
CKS1B-203ENST00000368439 PCP2Q8IVA1 136 aa10.87□□□□□ -0.67
CKS1B-203ENST00000368439 AKR1D1P51857 326 aa10.86□□□□□ -0.67
CKS1B-203ENST00000368439 JOSD1Q15040 202 aaPredicted RBP10.86□□□□□ -0.67
CKS1B-203ENST00000368439 Q8NBF4 154 aa10.86□□□□□ -0.67
CKS1B-203ENST00000368439 SCGB1D4Q6XE38 83 aa10.85□□□□□ -0.67
CKS1B-203ENST00000368439 OR13C6PQ8NH95 151 aa10.85□□□□□ -0.67
CKS1B-203ENST00000368439 CBY1Q9Y3M2 126 aa10.85□□□□□ -0.67
CKS1B-203ENST00000368439 LINC00518Q8N0U6 118 aa10.83□□□□□ -0.68
CKS1B-203ENST00000368439 SNRPEP62304 92 aaKnown RBP10.82□□□□□ -0.68
CKS1B-203ENST00000368439 ST20-AS1Q8NBB2 130 aa10.82□□□□□ -0.68
CKS1B-203ENST00000368439 IFITM1P13164 125 aa10.81□□□□□ -0.68
CKS1B-203ENST00000368439 S100A2P29034 98 aa10.81□□□□□ -0.68
CKS1B-203ENST00000368439 Q6ZVH6 145 aa10.81□□□□□ -0.68
CKS1B-203ENST00000368439 IGLV9-49A0A0B4J1Y8 123 aa10.8□□□□□ -0.68
CKS1B-203ENST00000368439 HINT1P49773 126 aaPredicted RBP10.8□□□□□ -0.68
CKS1B-203ENST00000368439 MOBPQ13875 183 aa10.8□□□□□ -0.68
CKS1B-203ENST00000368439 MUC17Q685J3 4493 aa10.8□□□□□ -0.68
CKS1B-203ENST00000368439 C5orf52A6NGY3 159 aa10.79□□□□□ -0.68
CKS1B-203ENST00000368439 C4orf48Q5BLP8 95 aa10.79□□□□□ -0.68
CKS1B-203ENST00000368439 SSBP3-AS1Q7Z2R9 100 aa10.79□□□□□ -0.68
CKS1B-203ENST00000368439 MUSTN1Q8IVN3 82 aa10.79□□□□□ -0.68
CKS1B-203ENST00000368439 MUC2Q02817 5179 aa10.78□□□□□ -0.68
CKS1B-203ENST00000368439 ELOF1P60002 83 aaKnown RBP10.78□□□□□ -0.68
CKS1B-203ENST00000368439 IGLV7-46A0A075B6I9 117 aa10.77□□□□□ -0.69
CKS1B-203ENST00000368439 SPINK1P00995 79 aa10.77□□□□□ -0.69
CKS1B-203ENST00000368439 TPRXLQ17RH7 258 aa10.77□□□□□ -0.69
CKS1B-203ENST00000368439 C6orf99Q4VX62 202 aa10.77□□□□□ -0.69
CKS1B-203ENST00000368439 COPS9Q8WXC6 57 aa10.77□□□□□ -0.69
CKS1B-203ENST00000368439 S100A6P06703 90 aa10.76□□□□□ -0.69
CKS1B-203ENST00000368439 SPRR1BP22528 89 aa10.76□□□□□ -0.69
CKS1B-203ENST00000368439 DHRS4-AS1Q9P1J3 65 aa10.76□□□□□ -0.69
CKS1B-203ENST00000368439 COX7BP24311 80 aa10.75□□□□□ -0.69
CKS1B-203ENST00000368439 TRBV7-6A0A0J9YX20 115 aa10.72□□□□□ -0.69
CKS1B-203ENST00000368439 RPS29P62273 56 aaKnown RBP10.72□□□□□ -0.69
CKS1B-203ENST00000368439 FP248Q71RG6 208 aaPredicted RBP10.72□□□□□ -0.69
CKS1B-203ENST00000368439 A6NDN8 102 aa10.7□□□□□ -0.7
CKS1B-203ENST00000368439 HSBP1L1C9JCN9 74 aa10.7□□□□□ -0.7
CKS1B-203ENST00000368439 C9orf153Q5TBE3 101 aa10.7□□□□□ -0.7
CKS1B-203ENST00000368439 Q8N377 158 aa10.69□□□□□ -0.7
CKS1B-203ENST00000368439 A0A1B0GWB2 263 aa10.67□□□□□ -0.7
CKS1B-203ENST00000368439 CDIP1Q9H305 208 aa10.67□□□□□ -0.7
CKS1B-203ENST00000368439 TRAV13-2A0A0B4J235 113 aa10.66□□□□□ -0.7
CKS1B-203ENST00000368439 SCGB1D1O95968 90 aa10.65□□□□□ -0.7
CKS1B-203ENST00000368439 KRTAP13-3Q3SY46 172 aa10.65□□□□□ -0.7
CKS1B-203ENST00000368439 SMIM11BQ8TCY0 68 aa10.65□□□□□ -0.7
CKS1B-203ENST00000368439 LINC01547P58512 204 aaPredicted RBP10.64□□□□□ -0.71
CKS1B-203ENST00000368439 SLC25A34Q6PIV7 304 aa10.64□□□□□ -0.71
CKS1B-203ENST00000368439 LAMTOR3Q9UHA4 124 aa10.63□□□□□ -0.71
CKS1B-203ENST00000368439 A4D1N5 150 aa10.62□□□□□ -0.71
CKS1B-203ENST00000368439 SLC25A20O43772 301 aa10.62□□□□□ -0.71
CKS1B-203ENST00000368439 TAL2Q16559 108 aa10.62□□□□□ -0.71
CKS1B-203ENST00000368439 SMIM29Q86T20 159 aa10.62□□□□□ -0.71
CKS1B-203ENST00000368439 IGLV5-48A0A075B6I7 105 aa10.61□□□□□ -0.71
CKS1B-203ENST00000368439 TEX49A0A1B0GTD5 131 aa10.61□□□□□ -0.71
CKS1B-203ENST00000368439 DEFB105AQ8NG35 78 aa10.61□□□□□ -0.71
CKS1B-203ENST00000368439 COX8AP10176 69 aa10.6□□□□□ -0.71
CKS1B-203ENST00000368439 Q1RN00 199 aa10.59□□□□□ -0.71
CKS1B-203ENST00000368439 FAT4Q6V0I7 4981 aa10.58□□□□□ -0.72
CKS1B-203ENST00000368439 DLEU1O43261 78 aa10.57□□□□□ -0.72
CKS1B-203ENST00000368439 KRTAP3-3Q9BYR6 98 aa10.57□□□□□ -0.72
CKS1B-203ENST00000368439 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
CKS1B-203ENST00000368439 HRCT1Q6UXD1 115 aa10.54□□□□□ -0.72
CKS1B-203ENST00000368439 HIST1H4GQ99525 98 aa10.54□□□□□ -0.72
CKS1B-203ENST00000368439 NHP2Q9NX24 153 aaKnown RBP10.54□□□□□ -0.72
CKS1B-203ENST00000368439 LINC00575Q6W349 94 aa10.53□□□□□ -0.72
CKS1B-203ENST00000368439 PRO1933Q9H354 126 aa10.53□□□□□ -0.72
CKS1B-203ENST00000368439 CD164Q04900 197 aa10.52□□□□□ -0.73
CKS1B-203ENST00000368439 C14orf144Q96I85 54 aa10.52□□□□□ -0.73
CKS1B-203ENST00000368439 C12orf57Q99622 126 aa10.52□□□□□ -0.73
CKS1B-203ENST00000368439 VAMP3Q15836 100 aa10.51□□□□□ -0.73
CKS1B-203ENST00000368439 SPATA45Q537H7 98 aa10.5□□□□□ -0.73
CKS1B-203ENST00000368439 LIMD2Q9BT23 127 aa10.5□□□□□ -0.73
CKS1B-203ENST00000368439 PAM16Q9Y3D7 125 aa10.5□□□□□ -0.73
CKS1B-203ENST00000368439 A0A0G2JQZ4 141 aa10.49□□□□□ -0.73
CKS1B-203ENST00000368439 HIGD1BQ9P298 99 aa10.49□□□□□ -0.73
CKS1B-203ENST00000368439 ASB16-AS1Q495Z4 193 aa10.48□□□□□ -0.73
CKS1B-203ENST00000368439 C2orf91Q6ZV80 131 aa10.48□□□□□ -0.73
CKS1B-203ENST00000368439 hADV29S1A0JD25 119 aa10.47□□□□□ -0.73
CKS1B-203ENST00000368439 A0A0U1RQV1 116 aa10.46□□□□□ -0.73
CKS1B-203ENST00000368439 H7C2G1 150 aa10.46□□□□□ -0.73
CKS1B-203ENST00000368439 CFC1BP0CG36 223 aa10.46□□□□□ -0.73
CKS1B-203ENST00000368439 CFC1P0CG37 223 aa10.46□□□□□ -0.73
CKS1B-203ENST00000368439 Q5XG85 94 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms