RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 TRBV7-4A0A0J9YYF1 115 aa8.49□□□□□ -1.05
PTPRK-207ENST00000368226 A0A087WTM6 91 aa8.49□□□□□ -1.05
PTPRK-207ENST00000368226 IGFL1Q6UW32 110 aa8.47□□□□□ -1.05
PTPRK-207ENST00000368226 OBSCN-AS1Q96MR7 158 aa8.46□□□□□ -1.06
PTPRK-207ENST00000368226 COX6B2Q6YFQ2 88 aa8.46□□□□□ -1.06
PTPRK-207ENST00000368226 KCNQ1DNQ9H478 68 aa8.45□□□□□ -1.06
PTPRK-207ENST00000368226 A8MWP4 228 aa8.45□□□□□ -1.06
PTPRK-207ENST00000368226 KRTAP1-1Q07627 177 aa8.45□□□□□ -1.06
PTPRK-207ENST00000368226 PRR34Q9NV39 138 aa8.45□□□□□ -1.06
PTPRK-207ENST00000368226 LINC00304Q8N9R0 145 aa8.44□□□□□ -1.06
PTPRK-207ENST00000368226 LINC00528Q8N1L1 170 aa8.43□□□□□ -1.06
PTPRK-207ENST00000368226 MRPL34Q9BQ48 92 aaKnown RBP8.42□□□□□ -1.06
PTPRK-207ENST00000368226 C4orf26Q17RF5 130 aa8.42□□□□□ -1.06
PTPRK-207ENST00000368226 ZNF861PO60384 105 aa8.41□□□□□ -1.06
PTPRK-207ENST00000368226 A0A1B0GW54 56 aa8.41□□□□□ -1.06
PTPRK-207ENST00000368226 FLNBO75369 2602 aaKnown RBP8.4□□□□□ -1.06
PTPRK-207ENST00000368226 APLNQ9ULZ1 77 aa8.4□□□□□ -1.06
PTPRK-207ENST00000368226 Q8N377 158 aa8.4□□□□□ -1.07
PTPRK-207ENST00000368226 CHD7Q9P2D1 2997 aa8.38□□□□□ -1.07
PTPRK-207ENST00000368226 PSORS1C2Q9UIG4 136 aa8.38□□□□□ -1.07
PTPRK-207ENST00000368226 LINC00612Q8N6U2 182 aa8.37□□□□□ -1.07
PTPRK-207ENST00000368226 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
PTPRK-207ENST00000368226 C8orf87E5RJ46 101 aa8.37□□□□□ -1.07
PTPRK-207ENST00000368226 C9orf163Q8N9P6 203 aa8.37□□□□□ -1.07
PTPRK-207ENST00000368226 BPTFQ12830 3046 aa8.36□□□□□ -1.07
PTPRK-207ENST00000368226 C8orf17Q9NRJ1 99 aa8.35□□□□□ -1.07
PTPRK-207ENST00000368226 LOC101927531A0A1B0GV80 90 aa8.35□□□□□ -1.07
PTPRK-207ENST00000368226 IGLV7-43P04211 117 aa8.35□□□□□ -1.07
PTPRK-207ENST00000368226 USP24Q9UPU5 2620 aa8.34□□□□□ -1.07
PTPRK-207ENST00000368226 H3BPC8 53 aa8.34□□□□□ -1.07
PTPRK-207ENST00000368226 MGAM2Q2M2H8 2515 aa8.32□□□□□ -1.08
PTPRK-207ENST00000368226 COA5Q86WW8 74 aa8.32□□□□□ -1.08
PTPRK-207ENST00000368226 A0A1B0GVX0 72 aa8.31□□□□□ -1.08
PTPRK-207ENST00000368226 MKI67P46013 3256 aaKnown RBP8.31□□□□□ -1.08
PTPRK-207ENST00000368226 PRR15Q8IV56 129 aa8.3□□□□□ -1.08
PTPRK-207ENST00000368226 TNP2Q05952 138 aa8.3□□□□□ -1.08
PTPRK-207ENST00000368226 LINC01600Q96MT4 127 aa8.3□□□□□ -1.08
PTPRK-207ENST00000368226 BRCA2P51587 3418 aa8.29□□□□□ -1.08
PTPRK-207ENST00000368226 LAMA3Q16787 3333 aa8.29□□□□□ -1.08
PTPRK-207ENST00000368226 TLX1NBP0CAT3 122 aa8.29□□□□□ -1.08
PTPRK-207ENST00000368226 ZNF575Q86XF7 245 aa8.29□□□□□ -1.08
PTPRK-207ENST00000368226 SSBP3-AS1Q7Z2R9 100 aa8.28□□□□□ -1.08
PTPRK-207ENST00000368226 SPRR4Q96PI1 79 aa8.27□□□□□ -1.09
PTPRK-207ENST00000368226 RANBP2P49792 3224 aaKnown RBP8.27□□□□□ -1.09
PTPRK-207ENST00000368226 A8MUN3 132 aa8.26□□□□□ -1.09
PTPRK-207ENST00000368226 IGLV5-37A0A075B6J1 123 aa8.25□□□□□ -1.09
PTPRK-207ENST00000368226 PLA2G2DQ9UNK4 145 aa8.25□□□□□ -1.09
PTPRK-207ENST00000368226 LINC00336Q6ZUF6 198 aa8.24□□□□□ -1.09
PTPRK-207ENST00000368226 HTTP42858 3142 aa8.24□□□□□ -1.09
PTPRK-207ENST00000368226 CNBPP62633 177 aaKnown RBP8.24□□□□□ -1.09
PTPRK-207ENST00000368226 Q8N1X5 172 aa8.23□□□□□ -1.09
PTPRK-207ENST00000368226 PRO0628Q9UI54 55 aa8.23□□□□□ -1.09
PTPRK-207ENST00000368226 LINC01554Q52M75 96 aa8.23□□□□□ -1.09
PTPRK-207ENST00000368226 A0A1W2PNM2 257 aa8.21□□□□□ -1.09
PTPRK-207ENST00000368226 FLNAP21333 2647 aaKnown RBP8.21□□□□□ -1.09
PTPRK-207ENST00000368226 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.21□□□□□ -1.1
PTPRK-207ENST00000368226 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.1
PTPRK-207ENST00000368226 A0A0D9SG42 100 aa8.17□□□□□ -1.1
PTPRK-207ENST00000368226 ITPR3Q14573 2671 aa8.17□□□□□ -1.1
PTPRK-207ENST00000368226 IGLV5-48A0A075B6I7 105 aa8.17□□□□□ -1.1
PTPRK-207ENST00000368226 PRR26Q8N8Z3 221 aa8.17□□□□□ -1.1
PTPRK-207ENST00000368226 RPS28P62857 69 aaKnown RBP8.15□□□□□ -1.11
PTPRK-207ENST00000368226 RBM12B-AS1Q9P1G2 102 aa8.15□□□□□ -1.11
PTPRK-207ENST00000368226 CHD9Q3L8U1 2897 aa8.14□□□□□ -1.11
PTPRK-207ENST00000368226 CFAP54Q96N23 3096 aa8.14□□□□□ -1.11
PTPRK-207ENST00000368226 UQCR11O14957 56 aa8.13□□□□□ -1.11
PTPRK-207ENST00000368226 MIR22HGQ0VDD5 57 aa8.11□□□□□ -1.11
PTPRK-207ENST00000368226 ATRQ13535 2644 aa8.1□□□□□ -1.11
PTPRK-207ENST00000368226 HELZ2Q9BYK8 2649 aaKnown RBP8.1□□□□□ -1.11
PTPRK-207ENST00000368226 PRUNE2Q8WUY3 3088 aa8.09□□□□□ -1.11
PTPRK-207ENST00000368226 CR1P17927 2039 aa8.08□□□□□ -1.12
PTPRK-207ENST00000368226 FAM104AQ969W3 186 aa8.07□□□□□ -1.12
PTPRK-207ENST00000368226 CFAP46Q8IYW2 2715 aa8.07□□□□□ -1.12
PTPRK-207ENST00000368226 XIRP2A4UGR9 3374 aa8.07□□□□□ -1.12
PTPRK-207ENST00000368226 UNC80Q8N2C7 3258 aa8.06□□□□□ -1.12
PTPRK-207ENST00000368226 IGLV7-46A0A075B6I9 117 aa8.06□□□□□ -1.12
PTPRK-207ENST00000368226 KLKP1Q107X0 134 aa8.06□□□□□ -1.12
PTPRK-207ENST00000368226 Q6ZSA8 131 aa8.06□□□□□ -1.12
PTPRK-207ENST00000368226 MAST4O15021 2626 aa8.06□□□□□ -1.12
PTPRK-207ENST00000368226 H7BZZ5 65 aa8.06□□□□□ -1.12
PTPRK-207ENST00000368226 MGAQ8IWI9 3026 aa8.05□□□□□ -1.12
PTPRK-207ENST00000368226 LAMA2P24043 3122 aaKnown RBP8.04□□□□□ -1.12
PTPRK-207ENST00000368226 CRIPTQ9P021 101 aa8.03□□□□□ -1.12
PTPRK-207ENST00000368226 CDH23Q9H251 3354 aa8.02□□□□□ -1.13
PTPRK-207ENST00000368226 Q8NDZ9 215 aa8.02□□□□□ -1.13
PTPRK-207ENST00000368226 M0R2T5 61 aa8.01□□□□□ -1.13
PTPRK-207ENST00000368226 CYP4F30PQ9H0H9 118 aa8.01□□□□□ -1.13
PTPRK-207ENST00000368226 CENPEQ02224 2701 aa8□□□□□ -1.13
PTPRK-207ENST00000368226 WDFY4Q6ZS81 3184 aa8□□□□□ -1.13
PTPRK-207ENST00000368226 KRTAP1-5Q9BYS1 174 aa7.97□□□□□ -1.13
PTPRK-207ENST00000368226 A0A0C4DFX4 3053 aa7.95□□□□□ -1.14
PTPRK-207ENST00000368226 TRIOO75962 3097 aa7.94□□□□□ -1.14
PTPRK-207ENST00000368226 WIPF1O43516 503 aa7.94□□□□□ -1.14
PTPRK-207ENST00000368226 PLAC8Q9NZF1 115 aa7.93□□□□□ -1.14
PTPRK-207ENST00000368226 CD164Q04900 197 aa7.91□□□□□ -1.14
PTPRK-207ENST00000368226 HRES1P13985 223 aa7.9□□□□□ -1.14
PTPRK-207ENST00000368226 OCR1Q9BZK8 76 aa7.9□□□□□ -1.15
PTPRK-207ENST00000368226 KRTAP10-2P60368 255 aa7.89□□□□□ -1.15
PTPRK-207ENST00000368226 CDC42SE1Q9NRR8 79 aa7.89□□□□□ -1.15
PTPRK-207ENST00000368226 Q5VSD8 79 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms