RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 IGLV1-50A0A075B6I6 118 aa6.01□□□□□ -1.45
SYNE1-205ENST00000367251 GIG44P09565 113 aaPredicted RBP6.01□□□□□ -1.45
SYNE1-205ENST00000367251 LINC00336Q6ZUF6 198 aa6.01□□□□□ -1.45
SYNE1-205ENST00000367251 ANKRD11Q6UB99 2663 aaPredicted RBP6.01□□□□□ -1.45
SYNE1-205ENST00000367251 TLX1NBP0CAT3 122 aa6□□□□□ -1.45
SYNE1-205ENST00000367251 TM2D3Q9BRN9 247 aa6□□□□□ -1.45
SYNE1-205ENST00000367251 TRAV22A0A0B4J277 110 aa5.99□□□□□ -1.45
SYNE1-205ENST00000367251 ST20-AS1Q8NBB2 130 aa5.99□□□□□ -1.45
SYNE1-205ENST00000367251 A8MWP4 228 aa5.98□□□□□ -1.45
SYNE1-205ENST00000367251 FLG2Q5D862 2391 aaPredicted RBP5.98□□□□□ -1.45
SYNE1-205ENST00000367251 EIF4EBP3O60516 100 aaPredicted RBP5.98□□□□□ -1.45
SYNE1-205ENST00000367251 C9orf129Q5T035 196 aaKnown RBP5.98□□□□□ -1.45
SYNE1-205ENST00000367251 KLKP1Q107X0 134 aa5.98□□□□□ -1.45
SYNE1-205ENST00000367251 BRCA2P51587 3418 aa5.97□□□□□ -1.45
SYNE1-205ENST00000367251 C8orf87E5RJ46 101 aa5.97□□□□□ -1.45
SYNE1-205ENST00000367251 USP34Q70CQ2 3546 aa5.97□□□□□ -1.45
SYNE1-205ENST00000367251 ZNF575Q86XF7 245 aa5.97□□□□□ -1.45
SYNE1-205ENST00000367251 OBSCN-AS1Q96MR7 158 aa5.97□□□□□ -1.45
SYNE1-205ENST00000367251 LOC101927531A0A1B0GV80 90 aa5.96□□□□□ -1.46
SYNE1-205ENST00000367251 C15orf56Q8N910 161 aa5.96□□□□□ -1.46
SYNE1-205ENST00000367251 C4orf26Q17RF5 130 aa5.96□□□□□ -1.46
SYNE1-205ENST00000367251 Q6ZSA8 131 aa5.95□□□□□ -1.46
SYNE1-205ENST00000367251 CAMK2N1Q7Z7J9 78 aa5.93□□□□□ -1.46
SYNE1-205ENST00000367251 DSCR10P59022 87 aa5.92□□□□□ -1.46
SYNE1-205ENST00000367251 SRCAPQ6ZRS2 3230 aa5.92□□□□□ -1.46
SYNE1-205ENST00000367251 IGLV5-48A0A075B6I7 105 aa5.92□□□□□ -1.46
SYNE1-205ENST00000367251 K7EQZ3 153 aa5.92□□□□□ -1.46
SYNE1-205ENST00000367251 CYP4F30PQ9H0H9 118 aa5.92□□□□□ -1.46
SYNE1-205ENST00000367251 K7EIL1 84 aa5.92□□□□□ -1.46
SYNE1-205ENST00000367251 Q8N377 158 aa5.91□□□□□ -1.46
SYNE1-205ENST00000367251 FAM168BA1KXE4 195 aa5.91□□□□□ -1.46
SYNE1-205ENST00000367251 IGFL1Q6UW32 110 aa5.91□□□□□ -1.46
SYNE1-205ENST00000367251 MRPL34Q9BQ48 92 aaKnown RBP5.91□□□□□ -1.46
SYNE1-205ENST00000367251 HECTD1Q9ULT8 2610 aa5.9□□□□□ -1.46
SYNE1-205ENST00000367251 KRTAP10-3P60369 221 aa5.9□□□□□ -1.46
SYNE1-205ENST00000367251 A0A0D9SG42 100 aa5.9□□□□□ -1.47
SYNE1-205ENST00000367251 PRR15Q8IV56 129 aa5.9□□□□□ -1.47
SYNE1-205ENST00000367251 KRTAP10-11P60412 298 aa5.89□□□□□ -1.47
SYNE1-205ENST00000367251 KRTAP1-3Q8IUG1 177 aa5.89□□□□□ -1.47
SYNE1-205ENST00000367251 STAB1Q9NY15 2570 aa5.89□□□□□ -1.47
SYNE1-205ENST00000367251 A0A087WTM6 91 aa5.88□□□□□ -1.47
SYNE1-205ENST00000367251 ZNF861PO60384 105 aa5.88□□□□□ -1.47
SYNE1-205ENST00000367251 H7BZZ5 65 aa5.87□□□□□ -1.47
SYNE1-205ENST00000367251 CNBPP62633 177 aaKnown RBP5.87□□□□□ -1.47
SYNE1-205ENST00000367251 LUZP6Q538Z0 58 aa5.86□□□□□ -1.47
SYNE1-205ENST00000367251 WDR87Q6ZQQ6 2873 aa5.86□□□□□ -1.47
SYNE1-205ENST00000367251 FAM104AQ969W3 186 aa5.86□□□□□ -1.47
SYNE1-205ENST00000367251 C8orf17Q9NRJ1 99 aa5.86□□□□□ -1.47
SYNE1-205ENST00000367251 UQCR11O14957 56 aa5.85□□□□□ -1.47
SYNE1-205ENST00000367251 COA5Q86WW8 74 aa5.85□□□□□ -1.47
SYNE1-205ENST00000367251 IGLV7-46A0A075B6I9 117 aa5.85□□□□□ -1.47
SYNE1-205ENST00000367251 C9orf163Q8N9P6 203 aa5.85□□□□□ -1.47
SYNE1-205ENST00000367251 KRTAP1-1Q07627 177 aa5.84□□□□□ -1.47
SYNE1-205ENST00000367251 A0A1B0GVX0 72 aa5.84□□□□□ -1.47
SYNE1-205ENST00000367251 SPANXA2-OT1Q8N9U9 137 aa5.84□□□□□ -1.47
SYNE1-205ENST00000367251 ANAPC11Q9NYG5 84 aa5.82□□□□□ -1.48
SYNE1-205ENST00000367251 LINC00483Q53H64 154 aa5.82□□□□□ -1.48
SYNE1-205ENST00000367251 A0A1W2PNM2 257 aa5.81□□□□□ -1.48
SYNE1-205ENST00000367251 IGLV7-43P04211 117 aa5.81□□□□□ -1.48
SYNE1-205ENST00000367251 WIPF1O43516 503 aa5.8□□□□□ -1.48
SYNE1-205ENST00000367251 SETXQ7Z333 2677 aaKnown RBP5.79□□□□□ -1.48
SYNE1-205ENST00000367251 ANKRD17O75179 2603 aaKnown RBP5.78□□□□□ -1.48
SYNE1-205ENST00000367251 A8MUN3 132 aa5.78□□□□□ -1.48
SYNE1-205ENST00000367251 SPRR4Q96PI1 79 aa5.78□□□□□ -1.48
SYNE1-205ENST00000367251 Q8N1X5 172 aa5.77□□□□□ -1.49
SYNE1-205ENST00000367251 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
SYNE1-205ENST00000367251 MIR22HGQ0VDD5 57 aa5.77□□□□□ -1.49
SYNE1-205ENST00000367251 PSORS1C2Q9UIG4 136 aa5.76□□□□□ -1.49
SYNE1-205ENST00000367251 A0A1W2PNN7 141 aa5.76□□□□□ -1.49
SYNE1-205ENST00000367251 OCR1Q9BZK8 76 aa5.76□□□□□ -1.49
SYNE1-205ENST00000367251 BPTFQ12830 3046 aa5.75□□□□□ -1.49
SYNE1-205ENST00000367251 CD164Q04900 197 aa5.74□□□□□ -1.49
SYNE1-205ENST00000367251 LAMA3Q16787 3333 aa5.74□□□□□ -1.49
SYNE1-205ENST00000367251 CASC10Q5T4H9 136 aa5.72□□□□□ -1.49
SYNE1-205ENST00000367251 TNP2Q05952 138 aa5.72□□□□□ -1.49
SYNE1-205ENST00000367251 REV3LO60673 3130 aa5.71□□□□□ -1.49
SYNE1-205ENST00000367251 HTTP42858 3142 aa5.71□□□□□ -1.49
SYNE1-205ENST00000367251 Q1T7F1 81 aa5.71□□□□□ -1.5
SYNE1-205ENST00000367251 HRES1P13985 223 aa5.71□□□□□ -1.5
SYNE1-205ENST00000367251 PRR26Q8N8Z3 221 aa5.71□□□□□ -1.5
SYNE1-205ENST00000367251 LAMA2P24043 3122 aaKnown RBP5.7□□□□□ -1.5
SYNE1-205ENST00000367251 SPRR1AP35321 89 aa5.7□□□□□ -1.5
SYNE1-205ENST00000367251 SEC61BP60468 96 aaKnown RBP5.69□□□□□ -1.5
SYNE1-205ENST00000367251 Q5VSD8 79 aa5.69□□□□□ -1.5
SYNE1-205ENST00000367251 A0A0G2JQZ4 141 aa5.68□□□□□ -1.5
SYNE1-205ENST00000367251 CSAG1Q6PB30 78 aa5.68□□□□□ -1.5
SYNE1-205ENST00000367251 DNAH12Q6ZR08 3092 aa5.67□□□□□ -1.5
SYNE1-205ENST00000367251 PLAC4Q8WY50 150 aa5.66□□□□□ -1.5
SYNE1-205ENST00000367251 DMBT1Q9UGM3 2413 aaPredicted RBP5.66□□□□□ -1.5
SYNE1-205ENST00000367251 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.5
SYNE1-205ENST00000367251 SPRR1BP22528 89 aa5.65□□□□□ -1.51
SYNE1-205ENST00000367251 CEP350Q5VT06 3117 aa5.63□□□□□ -1.51
SYNE1-205ENST00000367251 R4GN34 69 aa5.63□□□□□ -1.51
SYNE1-205ENST00000367251 FAM229BQ4G0N7 80 aa5.62□□□□□ -1.51
SYNE1-205ENST00000367251 Q8NDZ9 215 aa5.62□□□□□ -1.51
SYNE1-205ENST00000367251 BAHCC1Q9P281 2608 aa5.6□□□□□ -1.51
SYNE1-205ENST00000367251 LCA10Q71F78 164 aa5.6□□□□□ -1.51
SYNE1-205ENST00000367251 WDFY3Q8IZQ1 3526 aa5.6□□□□□ -1.51
SYNE1-205ENST00000367251 Q75L30 129 aa5.59□□□□□ -1.51
SYNE1-205ENST00000367251 PLAC8Q9NZF1 115 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms