RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TSPAN13O95857 204 aa12.92□□□□□ -0.34
SHISA4-201ENST00000362011 UBE2BP63146 152 aa12.92□□□□□ -0.34
SHISA4-201ENST00000362011 TRAV23DV6A0A075B6W5 121 aa12.91□□□□□ -0.34
SHISA4-201ENST00000362011 SMIM11BQ8TCY0 68 aa12.91□□□□□ -0.34
SHISA4-201ENST00000362011 PRYO14603 147 aa12.9□□□□□ -0.34
SHISA4-201ENST00000362011 TAX1BP3O14907 124 aa12.9□□□□□ -0.34
SHISA4-201ENST00000362011 XGP55808 180 aa12.88□□□□□ -0.35
SHISA4-201ENST00000362011 HAMPP81172 84 aa12.88□□□□□ -0.35
SHISA4-201ENST00000362011 KCNQ1DNQ9H478 68 aa12.88□□□□□ -0.35
SHISA4-201ENST00000362011 DMBT1Q9UGM3 2413 aaPredicted RBP12.88□□□□□ -0.35
SHISA4-201ENST00000362011 RPL28P46779 137 aaKnown RBP12.88□□□□□ -0.35
SHISA4-201ENST00000362011 PSMB2P49721 201 aa12.87□□□□□ -0.35
SHISA4-201ENST00000362011 C9orf118A6NHY6 69 aa12.86□□□□□ -0.35
SHISA4-201ENST00000362011 INAFM2P0DMQ5 153 aa12.86□□□□□ -0.35
SHISA4-201ENST00000362011 DIRC1Q969H9 104 aa12.86□□□□□ -0.35
SHISA4-201ENST00000362011 NAA38Q9BRA0 125 aaKnown RBP12.85□□□□□ -0.35
SHISA4-201ENST00000362011 ZNF73O43830 326 aaPredicted RBP12.84□□□□□ -0.35
SHISA4-201ENST00000362011 C6orf99Q4VX62 202 aa12.84□□□□□ -0.35
SHISA4-201ENST00000362011 REG3GQ6UW15 175 aa12.84□□□□□ -0.35
SHISA4-201ENST00000362011 KRTAP11-1Q8IUC1 163 aa12.84□□□□□ -0.35
SHISA4-201ENST00000362011 MYCBP2O75592 4640 aa12.83□□□□□ -0.35
SHISA4-201ENST00000362011 VPS13BQ7Z7G8 4022 aa12.83□□□□□ -0.36
SHISA4-201ENST00000362011 H3BUT2 72 aa12.83□□□□□ -0.36
SHISA4-201ENST00000362011 TRIAP1O43715 76 aa12.83□□□□□ -0.36
SHISA4-201ENST00000362011 COX6CP09669 75 aa12.81□□□□□ -0.36
SHISA4-201ENST00000362011 SPRR1AP35321 89 aa12.81□□□□□ -0.36
SHISA4-201ENST00000362011 VAMP3Q15836 100 aa12.8□□□□□ -0.36
SHISA4-201ENST00000362011 Q5VSD8 79 aa12.8□□□□□ -0.36
SHISA4-201ENST00000362011 ETDCA0A1B0GVM5 59 aa12.79□□□□□ -0.36
SHISA4-201ENST00000362011 TRBV7-6A0A0J9YX20 115 aa12.78□□□□□ -0.36
SHISA4-201ENST00000362011 SCGB1C2P0DMR2 95 aa12.78□□□□□ -0.36
SHISA4-201ENST00000362011 LYRM7Q5U5X0 104 aa12.78□□□□□ -0.36
SHISA4-201ENST00000362011 KRTAP4-16G5E9R7 235 aaPredicted RBP12.77□□□□□ -0.37
SHISA4-201ENST00000362011 COX7BP24311 80 aa12.77□□□□□ -0.37
SHISA4-201ENST00000362011 PSORS1C2Q9UIG4 136 aa12.77□□□□□ -0.37
SHISA4-201ENST00000362011 A0A1W2PPM0 123 aa12.76□□□□□ -0.37
SHISA4-201ENST00000362011 H0YGX0 51 aa12.76□□□□□ -0.37
SHISA4-201ENST00000362011 BCE1O60756 84 aa12.75□□□□□ -0.37
SHISA4-201ENST00000362011 ELOF1P60002 83 aaKnown RBP12.75□□□□□ -0.37
SHISA4-201ENST00000362011 FAM19A1Q7Z5A9 133 aa12.75□□□□□ -0.37
SHISA4-201ENST00000362011 B5MCH6 92 aa12.74□□□□□ -0.37
SHISA4-201ENST00000362011 FABP2P12104 132 aa12.73□□□□□ -0.37
SHISA4-201ENST00000362011 C1orf137Q5JT78 98 aa12.72□□□□□ -0.37
SHISA4-201ENST00000362011 Q6ZRX8 168 aa12.71□□□□□ -0.37
SHISA4-201ENST00000362011 LINC00528Q8N1L1 170 aa12.71□□□□□ -0.37
SHISA4-201ENST00000362011 CLEC2BQ92478 149 aa12.71□□□□□ -0.37
SHISA4-201ENST00000362011 SRRM2Q9UQ35 2752 aaKnown RBP12.71□□□□□ -0.37
SHISA4-201ENST00000362011 UBE2AP49459 152 aa12.7□□□□□ -0.38
SHISA4-201ENST00000362011 FLG2Q5D862 2391 aaPredicted RBP12.7□□□□□ -0.38
SHISA4-201ENST00000362011 PRLHP81277 87 aa12.68□□□□□ -0.38
SHISA4-201ENST00000362011 LINC00575Q6W349 94 aa12.68□□□□□ -0.38
SHISA4-201ENST00000362011 H0Y9J4 135 aa12.67□□□□□ -0.38
SHISA4-201ENST00000362011 SLC25A20O43772 301 aa12.67□□□□□ -0.38
SHISA4-201ENST00000362011 SMR3BP02814 79 aaPredicted RBP12.67□□□□□ -0.38
SHISA4-201ENST00000362011 FAM218AQ96MZ4 157 aa12.67□□□□□ -0.38
SHISA4-201ENST00000362011 TRBV20-1A0A075B6N2 111 aa12.66□□□□□ -0.38
SHISA4-201ENST00000362011 TCL1BO95988 128 aa12.66□□□□□ -0.38
SHISA4-201ENST00000362011 SPCS1Q9Y6A9 102 aa12.66□□□□□ -0.38
SHISA4-201ENST00000362011 SNCGO76070 127 aa12.65□□□□□ -0.38
SHISA4-201ENST00000362011 RPL37AP61513 92 aaKnown RBP12.65□□□□□ -0.38
SHISA4-201ENST00000362011 DHRS4-AS1Q9P1J3 65 aa12.65□□□□□ -0.38
SHISA4-201ENST00000362011 A0A1B0GX51 115 aa12.64□□□□□ -0.39
SHISA4-201ENST00000362011 hADV29S1A0JD25 119 aa12.64□□□□□ -0.39
SHISA4-201ENST00000362011 LST1O00453 97 aa12.64□□□□□ -0.39
SHISA4-201ENST00000362011 IGLV7-43P04211 117 aa12.64□□□□□ -0.39
SHISA4-201ENST00000362011 ATXN8Q156A1 80 aa12.64□□□□□ -0.39
SHISA4-201ENST00000362011 KRTAP13-1Q8IUC0 172 aa12.64□□□□□ -0.39
SHISA4-201ENST00000362011 Q9BRP9 147 aa12.64□□□□□ -0.39
SHISA4-201ENST00000362011 FAM229AH3BQW9 127 aa12.63□□□□□ -0.39
SHISA4-201ENST00000362011 A0A1B0GV90 55 aa12.62□□□□□ -0.39
SHISA4-201ENST00000362011 SMCR5Q8TEV8 140 aa12.62□□□□□ -0.39
SHISA4-201ENST00000362011 HIGD2AQ9BW72 106 aa12.62□□□□□ -0.39
SHISA4-201ENST00000362011 K7EP34 96 aa12.61□□□□□ -0.39
SHISA4-201ENST00000362011 TRACP01848 142 aa12.61□□□□□ -0.39
SHISA4-201ENST00000362011 ZNF861PO60384 105 aa12.6□□□□□ -0.39
SHISA4-201ENST00000362011 DNAL4O96015 105 aa12.6□□□□□ -0.39
SHISA4-201ENST00000362011 GTF2H5Q6ZYL4 71 aa12.59□□□□□ -0.39
SHISA4-201ENST00000362011 ERC2-IT1O76042 136 aa12.57□□□□□ -0.4
SHISA4-201ENST00000362011 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.56□□□□□ -0.4
SHISA4-201ENST00000362011 H3BMG7 143 aa12.55□□□□□ -0.4
SHISA4-201ENST00000362011 Q6ZQY7 126 aa12.55□□□□□ -0.4
SHISA4-201ENST00000362011 PLA2G1BP04054 148 aaKnown RBP12.54□□□□□ -0.4
SHISA4-201ENST00000362011 KRTAP29-1A8MX34 341 aaPredicted RBP12.53□□□□□ -0.4
SHISA4-201ENST00000362011 J3QL48 77 aa12.53□□□□□ -0.4
SHISA4-201ENST00000362011 C9JAW5 83 aa12.51□□□□□ -0.41
SHISA4-201ENST00000362011 ORMDL1Q9P0S3 153 aa12.51□□□□□ -0.41
SHISA4-201ENST00000362011 KRTAP10-4P60372 401 aaPredicted RBP12.5□□□□□ -0.41
SHISA4-201ENST00000362011 OCIAD2Q56VL3 154 aa12.5□□□□□ -0.41
SHISA4-201ENST00000362011 ST20-AS1Q8NBB2 130 aa12.5□□□□□ -0.41
SHISA4-201ENST00000362011 HMCN2Q8NDA2 5059 aa12.49□□□□□ -0.41
SHISA4-201ENST00000362011 GHRHP01286 108 aa12.48□□□□□ -0.41
SHISA4-201ENST00000362011 ZNF706Q9Y5V0 76 aaPredicted RBP12.48□□□□□ -0.41
SHISA4-201ENST00000362011 DEFB105AQ8NG35 78 aa12.47□□□□□ -0.41
SHISA4-201ENST00000362011 H3BQ85 93 aa12.46□□□□□ -0.41
SHISA4-201ENST00000362011 UBE2V1Q13404 147 aa12.46□□□□□ -0.41
SHISA4-201ENST00000362011 SPINK6Q6UWN8 80 aa12.46□□□□□ -0.41
SHISA4-201ENST00000362011 IGLV5-48A0A075B6I7 105 aa12.45□□□□□ -0.42
SHISA4-201ENST00000362011 LINC01547P58512 204 aaPredicted RBP12.45□□□□□ -0.42
SHISA4-201ENST00000362011 MTURNQ8N3F0 131 aa12.45□□□□□ -0.42
SHISA4-201ENST00000362011 BAALC-AS2P0C853 105 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms