RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 BPTFQ12830 3046 aa13.32□□□□□ -0.28
CDC42BPB-201ENST00000361246 IGFL1Q6UW32 110 aa13.31□□□□□ -0.28
CDC42BPB-201ENST00000361246 MRPL34Q9BQ48 92 aaKnown RBP13.31□□□□□ -0.28
CDC42BPB-201ENST00000361246 A8MWP4 228 aa13.3□□□□□ -0.28
CDC42BPB-201ENST00000361246 KRTAP1-3Q8IUG1 177 aa13.3□□□□□ -0.28
CDC42BPB-201ENST00000361246 GIG44P09565 113 aaPredicted RBP13.29□□□□□ -0.28
CDC42BPB-201ENST00000361246 PSORS1C2Q9UIG4 136 aa13.29□□□□□ -0.28
CDC42BPB-201ENST00000361246 SPINT4Q6UDR6 99 aa13.27□□□□□ -0.28
CDC42BPB-201ENST00000361246 IGLV7-43P04211 117 aa13.25□□□□□ -0.29
CDC42BPB-201ENST00000361246 TNP2Q05952 138 aa13.25□□□□□ -0.29
CDC42BPB-201ENST00000361246 LOC110117498A0A087WWA1 95 aa13.24□□□□□ -0.29
CDC42BPB-201ENST00000361246 MKI67P46013 3256 aaKnown RBP13.23□□□□□ -0.29
CDC42BPB-201ENST00000361246 SSBP3-AS1Q7Z2R9 100 aa13.23□□□□□ -0.29
CDC42BPB-201ENST00000361246 C8orf87E5RJ46 101 aa13.23□□□□□ -0.29
CDC42BPB-201ENST00000361246 LINC00336Q6ZUF6 198 aa13.22□□□□□ -0.29
CDC42BPB-201ENST00000361246 M0R2T5 61 aa13.2□□□□□ -0.3
CDC42BPB-201ENST00000361246 EIF4EBP3O60516 100 aaPredicted RBP13.2□□□□□ -0.3
CDC42BPB-201ENST00000361246 KCNQ1DNQ9H478 68 aa13.19□□□□□ -0.3
CDC42BPB-201ENST00000361246 A0A0D9SG42 100 aa13.19□□□□□ -0.3
CDC42BPB-201ENST00000361246 RBM12B-AS1Q9P1G2 102 aa13.19□□□□□ -0.3
CDC42BPB-201ENST00000361246 C4orf26Q17RF5 130 aa13.18□□□□□ -0.3
CDC42BPB-201ENST00000361246 LINC01600Q96MT4 127 aa13.18□□□□□ -0.3
CDC42BPB-201ENST00000361246 LITAFQ99732 161 aa13.17□□□□□ -0.3
CDC42BPB-201ENST00000361246 KRTAP1-1Q07627 177 aa13.17□□□□□ -0.3
CDC42BPB-201ENST00000361246 C8orf17Q9NRJ1 99 aa13.16□□□□□ -0.3
CDC42BPB-201ENST00000361246 Q8N1X5 172 aa13.15□□□□□ -0.3
CDC42BPB-201ENST00000361246 C9orf163Q8N9P6 203 aa13.15□□□□□ -0.3
CDC42BPB-201ENST00000361246 Q8N377 158 aa13.15□□□□□ -0.3
CDC42BPB-201ENST00000361246 ERC2-IT1O76042 136 aa13.14□□□□□ -0.31
CDC42BPB-201ENST00000361246 XIRP2A4UGR9 3374 aa13.13□□□□□ -0.31
CDC42BPB-201ENST00000361246 LOC101927531A0A1B0GV80 90 aa13.13□□□□□ -0.31
CDC42BPB-201ENST00000361246 PRR34Q9NV39 138 aa13.11□□□□□ -0.31
CDC42BPB-201ENST00000361246 COA5Q86WW8 74 aa13.11□□□□□ -0.31
CDC42BPB-201ENST00000361246 A0A1B0GVX0 72 aa13.11□□□□□ -0.31
CDC42BPB-201ENST00000361246 PRRC2CQ9Y520 2896 aaKnown RBP13.1□□□□□ -0.31
CDC42BPB-201ENST00000361246 ZNF575Q86XF7 245 aa13.1□□□□□ -0.31
CDC42BPB-201ENST00000361246 PRR15Q8IV56 129 aa13.06□□□□□ -0.32
CDC42BPB-201ENST00000361246 PRR26Q8N8Z3 221 aa13.06□□□□□ -0.32
CDC42BPB-201ENST00000361246 USP24Q9UPU5 2620 aa13.06□□□□□ -0.32
CDC42BPB-201ENST00000361246 PRO0461Q9UI25 63 aa13.04□□□□□ -0.32
CDC42BPB-201ENST00000361246 LINC00612Q8N6U2 182 aa13.04□□□□□ -0.32
CDC42BPB-201ENST00000361246 BRCA2P51587 3418 aa13.04□□□□□ -0.32
CDC42BPB-201ENST00000361246 A0A1B0GW54 56 aa13.04□□□□□ -0.32
CDC42BPB-201ENST00000361246 IGLV5-48A0A075B6I7 105 aa13.03□□□□□ -0.32
CDC42BPB-201ENST00000361246 H3BPC8 53 aa13.02□□□□□ -0.32
CDC42BPB-201ENST00000361246 HECTD1Q9ULT8 2610 aa13.02□□□□□ -0.32
CDC42BPB-201ENST00000361246 Q6ZSA8 131 aa13.02□□□□□ -0.33
CDC42BPB-201ENST00000361246 SPRR4Q96PI1 79 aa13.02□□□□□ -0.33
CDC42BPB-201ENST00000361246 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPB-201ENST00000361246 IGLV7-46A0A075B6I9 117 aa12.97□□□□□ -0.33
CDC42BPB-201ENST00000361246 KLK9Q2XQG4 91 aa12.97□□□□□ -0.33
CDC42BPB-201ENST00000361246 CR1P17927 2039 aa12.97□□□□□ -0.33
CDC42BPB-201ENST00000361246 LAMA3Q16787 3333 aa12.96□□□□□ -0.33
CDC42BPB-201ENST00000361246 A8MUN3 132 aa12.94□□□□□ -0.34
CDC42BPB-201ENST00000361246 TLX1NBP0CAT3 122 aa12.93□□□□□ -0.34
CDC42BPB-201ENST00000361246 EPG5Q9HCE0 2579 aa12.9□□□□□ -0.34
CDC42BPB-201ENST00000361246 CRIPTQ9P021 101 aa12.9□□□□□ -0.34
CDC42BPB-201ENST00000361246 CNBPP62633 177 aaKnown RBP12.89□□□□□ -0.35
CDC42BPB-201ENST00000361246 CHD7Q9P2D1 2997 aa12.87□□□□□ -0.35
CDC42BPB-201ENST00000361246 PLA2G2DQ9UNK4 145 aa12.87□□□□□ -0.35
CDC42BPB-201ENST00000361246 MIR22HGQ0VDD5 57 aa12.87□□□□□ -0.35
CDC42BPB-201ENST00000361246 CFAP54Q96N23 3096 aa12.86□□□□□ -0.35
CDC42BPB-201ENST00000361246 PRUNE2Q8WUY3 3088 aa12.85□□□□□ -0.35
CDC42BPB-201ENST00000361246 UQCR11O14957 56 aa12.85□□□□□ -0.35
CDC42BPB-201ENST00000361246 MGAM2Q2M2H8 2515 aa12.83□□□□□ -0.36
CDC42BPB-201ENST00000361246 FLNBO75369 2602 aaKnown RBP12.82□□□□□ -0.36
CDC42BPB-201ENST00000361246 A0A1W2PNM2 257 aa12.77□□□□□ -0.37
CDC42BPB-201ENST00000361246 CELSR3Q9NYQ7 3312 aa12.76□□□□□ -0.37
CDC42BPB-201ENST00000361246 PRO0628Q9UI54 55 aa12.74□□□□□ -0.37
CDC42BPB-201ENST00000361246 CDH23Q9H251 3354 aa12.74□□□□□ -0.37
CDC42BPB-201ENST00000361246 LAMA2P24043 3122 aaKnown RBP12.72□□□□□ -0.37
CDC42BPB-201ENST00000361246 FAM104AQ969W3 186 aa12.71□□□□□ -0.37
CDC42BPB-201ENST00000361246 Q5VSD8 79 aa12.71□□□□□ -0.37
CDC42BPB-201ENST00000361246 RANBP2P49792 3224 aaKnown RBP12.7□□□□□ -0.38
CDC42BPB-201ENST00000361246 CAMK2N1Q7Z7J9 78 aa12.68□□□□□ -0.38
CDC42BPB-201ENST00000361246 ITPR3Q14573 2671 aa12.67□□□□□ -0.38
CDC42BPB-201ENST00000361246 FLNAP21333 2647 aaKnown RBP12.65□□□□□ -0.39
CDC42BPB-201ENST00000361246 HTTP42858 3142 aa12.61□□□□□ -0.39
CDC42BPB-201ENST00000361246 TRIOO75962 3097 aa12.61□□□□□ -0.39
CDC42BPB-201ENST00000361246 UNC80Q8N2C7 3258 aa12.6□□□□□ -0.39
CDC42BPB-201ENST00000361246 DNAH14Q0VDD8 3507 aa12.59□□□□□ -0.39
CDC42BPB-201ENST00000361246 CDC42SE1Q9NRR8 79 aa12.57□□□□□ -0.4
CDC42BPB-201ENST00000361246 CFAP46Q8IYW2 2715 aa12.56□□□□□ -0.4
CDC42BPB-201ENST00000361246 KRTAP10-2P60368 255 aa12.54□□□□□ -0.4
CDC42BPB-201ENST00000361246 HELZ2Q9BYK8 2649 aaKnown RBP12.53□□□□□ -0.4
CDC42BPB-201ENST00000361246 S4R3F8 94 aa12.52□□□□□ -0.4
CDC42BPB-201ENST00000361246 MGAQ8IWI9 3026 aa12.51□□□□□ -0.41
CDC42BPB-201ENST00000361246 SZT2Q5T011 3432 aa12.51□□□□□ -0.41
CDC42BPB-201ENST00000361246 KRTAP10-1P60331 282 aa12.5□□□□□ -0.41
CDC42BPB-201ENST00000361246 RPS28P62857 69 aaKnown RBP12.5□□□□□ -0.41
CDC42BPB-201ENST00000361246 CYP4F30PQ9H0H9 118 aa12.48□□□□□ -0.41
CDC42BPB-201ENST00000361246 A0A0C4DFX4 3053 aa12.48□□□□□ -0.41
CDC42BPB-201ENST00000361246 KRTAP1-5Q9BYS1 174 aa12.47□□□□□ -0.41
CDC42BPB-201ENST00000361246 PLAC8Q9NZF1 115 aa12.47□□□□□ -0.41
CDC42BPB-201ENST00000361246 WDFY4Q6ZS81 3184 aa12.47□□□□□ -0.41
CDC42BPB-201ENST00000361246 LCE6AA0A183 80 aa12.43□□□□□ -0.42
CDC42BPB-201ENST00000361246 HRES1P13985 223 aa12.43□□□□□ -0.42
CDC42BPB-201ENST00000361246 H7BZZ5 65 aa12.42□□□□□ -0.42
CDC42BPB-201ENST00000361246 ATRQ13535 2644 aa12.42□□□□□ -0.42
CDC42BPB-201ENST00000361246 CD164Q04900 197 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms