RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 KLKP1Q107X0 134 aa13.81□□□□□ -0.2
NCKAP1-201ENST00000360982 CHTF8P0CG12 524 aa13.81□□□□□ -0.2
NCKAP1-201ENST00000360982 C1orf64Q8NEQ6 169 aa13.81□□□□□ -0.2
NCKAP1-201ENST00000360982 LINC00476Q8WZB0 136 aa13.8□□□□□ -0.2
NCKAP1-201ENST00000360982 WIPF1O43516 503 aa13.8□□□□□ -0.2
NCKAP1-201ENST00000360982 H7BZZ5 65 aa13.78□□□□□ -0.2
NCKAP1-201ENST00000360982 ITPR3Q14573 2671 aa13.77□□□□□ -0.2
NCKAP1-201ENST00000360982 RPL37AP61513 92 aaKnown RBP13.76□□□□□ -0.21
NCKAP1-201ENST00000360982 J3QL48 77 aa13.75□□□□□ -0.21
NCKAP1-201ENST00000360982 VPREB1P12018 145 aa13.75□□□□□ -0.21
NCKAP1-201ENST00000360982 ERC2-IT1O76042 136 aa13.74□□□□□ -0.21
NCKAP1-201ENST00000360982 PRR34Q9NV39 138 aa13.72□□□□□ -0.21
NCKAP1-201ENST00000360982 LINC00313P59037 77 aa13.71□□□□□ -0.21
NCKAP1-201ENST00000360982 A8MUN3 132 aa13.71□□□□□ -0.22
NCKAP1-201ENST00000360982 KRTAP10-3P60369 221 aa13.71□□□□□ -0.22
NCKAP1-201ENST00000360982 KRTAP1-3Q8IUG1 177 aa13.69□□□□□ -0.22
NCKAP1-201ENST00000360982 ST20-AS1Q8NBB2 130 aa13.69□□□□□ -0.22
NCKAP1-201ENST00000360982 LINC00612Q8N6U2 182 aa13.69□□□□□ -0.22
NCKAP1-201ENST00000360982 IGLV6-57P01721 117 aa13.68□□□□□ -0.22
NCKAP1-201ENST00000360982 GIG44P09565 113 aaPredicted RBP13.67□□□□□ -0.22
NCKAP1-201ENST00000360982 CDH23Q9H251 3354 aa13.67□□□□□ -0.22
NCKAP1-201ENST00000360982 SERTAD4-AS1Q5TG53 156 aa13.66□□□□□ -0.22
NCKAP1-201ENST00000360982 C7orf65Q6ZTY9 151 aa13.66□□□□□ -0.22
NCKAP1-201ENST00000360982 CD164Q04900 197 aa13.66□□□□□ -0.22
NCKAP1-201ENST00000360982 STAB1Q9NY15 2570 aa13.66□□□□□ -0.22
NCKAP1-201ENST00000360982 SPAG11AQ6PDA7 123 aa13.66□□□□□ -0.22
NCKAP1-201ENST00000360982 TRBV7-4A0A0J9YYF1 115 aa13.64□□□□□ -0.23
NCKAP1-201ENST00000360982 LINC01600Q96MT4 127 aa13.64□□□□□ -0.23
NCKAP1-201ENST00000360982 KRTAP1-1Q07627 177 aa13.64□□□□□ -0.23
NCKAP1-201ENST00000360982 DSPP15924 2871 aaKnown RBP13.64□□□□□ -0.23
NCKAP1-201ENST00000360982 H3BPC8 53 aa13.63□□□□□ -0.23
NCKAP1-201ENST00000360982 KCNQ1DNQ9H478 68 aa13.63□□□□□ -0.23
NCKAP1-201ENST00000360982 A0A087WTM6 91 aa13.63□□□□□ -0.23
NCKAP1-201ENST00000360982 IGLV1-50A0A075B6I6 118 aa13.63□□□□□ -0.23
NCKAP1-201ENST00000360982 ATP11AUNQ6ZP68 121 aa13.62□□□□□ -0.23
NCKAP1-201ENST00000360982 MAP1AP78559 2803 aaPredicted RBP13.62□□□□□ -0.23
NCKAP1-201ENST00000360982 C9orf163Q8N9P6 203 aa13.61□□□□□ -0.23
NCKAP1-201ENST00000360982 C8orf87E5RJ46 101 aa13.61□□□□□ -0.23
NCKAP1-201ENST00000360982 ACYP2P14621 99 aa13.61□□□□□ -0.23
NCKAP1-201ENST00000360982 FAM168BA1KXE4 195 aa13.6□□□□□ -0.23
NCKAP1-201ENST00000360982 C9orf129Q5T035 196 aaKnown RBP13.6□□□□□ -0.23
NCKAP1-201ENST00000360982 SETXQ7Z333 2677 aaKnown RBP13.6□□□□□ -0.23
NCKAP1-201ENST00000360982 TEP1Q99973 2627 aaKnown RBP13.6□□□□□ -0.23
NCKAP1-201ENST00000360982 SSBP3-AS1Q7Z2R9 100 aa13.59□□□□□ -0.23
NCKAP1-201ENST00000360982 TRAV22A0A0B4J277 110 aa13.58□□□□□ -0.24
NCKAP1-201ENST00000360982 ZNF861PO60384 105 aa13.56□□□□□ -0.24
NCKAP1-201ENST00000360982 C15orf56Q8N910 161 aa13.56□□□□□ -0.24
NCKAP1-201ENST00000360982 VPS13AQ96RL7 3174 aa13.56□□□□□ -0.24
NCKAP1-201ENST00000360982 Q96NJ1 140 aa13.55□□□□□ -0.24
NCKAP1-201ENST00000360982 CYP4F30PQ9H0H9 118 aa13.55□□□□□ -0.24
NCKAP1-201ENST00000360982 LINC00528Q8N1L1 170 aa13.54□□□□□ -0.24
NCKAP1-201ENST00000360982 TLX1NBP0CAT3 122 aa13.52□□□□□ -0.25
NCKAP1-201ENST00000360982 A0A1B0GU69 56 aa13.51□□□□□ -0.25
NCKAP1-201ENST00000360982 APLNQ9ULZ1 77 aa13.51□□□□□ -0.25
NCKAP1-201ENST00000360982 LINC00304Q8N9R0 145 aa13.5□□□□□ -0.25
NCKAP1-201ENST00000360982 A8MWP4 228 aa13.5□□□□□ -0.25
NCKAP1-201ENST00000360982 LOC101927531A0A1B0GV80 90 aa13.47□□□□□ -0.25
NCKAP1-201ENST00000360982 PLA2G2DQ9UNK4 145 aa13.47□□□□□ -0.25
NCKAP1-201ENST00000360982 KTN1-AS1Q86SY8 53 aa13.45□□□□□ -0.26
NCKAP1-201ENST00000360982 K7EQZ3 153 aa13.45□□□□□ -0.26
NCKAP1-201ENST00000360982 Q5XG85 94 aa13.44□□□□□ -0.26
NCKAP1-201ENST00000360982 ZNF575Q86XF7 245 aa13.44□□□□□ -0.26
NCKAP1-201ENST00000360982 MRPL34Q9BQ48 92 aaKnown RBP13.44□□□□□ -0.26
NCKAP1-201ENST00000360982 AKAP13Q12802 2813 aa13.44□□□□□ -0.26
NCKAP1-201ENST00000360982 CNBPP62633 177 aaKnown RBP13.42□□□□□ -0.26
NCKAP1-201ENST00000360982 COA5Q86WW8 74 aa13.42□□□□□ -0.26
NCKAP1-201ENST00000360982 SMR3BP02814 79 aaPredicted RBP13.41□□□□□ -0.26
NCKAP1-201ENST00000360982 OBSCN-AS1Q96MR7 158 aa13.4□□□□□ -0.26
NCKAP1-201ENST00000360982 COX6B2Q6YFQ2 88 aa13.4□□□□□ -0.26
NCKAP1-201ENST00000360982 SZT2Q5T011 3432 aa13.4□□□□□ -0.27
NCKAP1-201ENST00000360982 PRR15Q8IV56 129 aa13.39□□□□□ -0.27
NCKAP1-201ENST00000360982 IGFL1Q6UW32 110 aa13.38□□□□□ -0.27
NCKAP1-201ENST00000360982 IGLV7-43P04211 117 aa13.38□□□□□ -0.27
NCKAP1-201ENST00000360982 CYSTM1Q9H1C7 97 aa13.37□□□□□ -0.27
NCKAP1-201ENST00000360982 PSORS1C2Q9UIG4 136 aa13.33□□□□□ -0.28
NCKAP1-201ENST00000360982 Q8N377 158 aa13.31□□□□□ -0.28
NCKAP1-201ENST00000360982 TEX15Q9BXT5 2789 aa13.31□□□□□ -0.28
NCKAP1-201ENST00000360982 LCA10Q71F78 164 aa13.3□□□□□ -0.28
NCKAP1-201ENST00000360982 C8orf17Q9NRJ1 99 aa13.29□□□□□ -0.28
NCKAP1-201ENST00000360982 CHD6Q8TD26 2715 aa13.29□□□□□ -0.28
NCKAP1-201ENST00000360982 A0A1W2PNN7 141 aa13.29□□□□□ -0.28
NCKAP1-201ENST00000360982 A0A1B0GVX0 72 aa13.27□□□□□ -0.29
NCKAP1-201ENST00000360982 CASC10Q5T4H9 136 aa13.27□□□□□ -0.29
NCKAP1-201ENST00000360982 COL6A5A8TX70 2615 aa13.27□□□□□ -0.29
NCKAP1-201ENST00000360982 IGSF10Q6WRI0 2623 aa13.27□□□□□ -0.29
NCKAP1-201ENST00000360982 SPRR4Q96PI1 79 aa13.25□□□□□ -0.29
NCKAP1-201ENST00000360982 DSCR10P59022 87 aa13.25□□□□□ -0.29
NCKAP1-201ENST00000360982 FP248Q71RG6 208 aaPredicted RBP13.25□□□□□ -0.29
NCKAP1-201ENST00000360982 Q1T7F1 81 aa13.23□□□□□ -0.29
NCKAP1-201ENST00000360982 LAMA1P25391 3075 aa13.21□□□□□ -0.29
NCKAP1-201ENST00000360982 OCR1Q9BZK8 76 aa13.21□□□□□ -0.29
NCKAP1-201ENST00000360982 CELSR3Q9NYQ7 3312 aa13.21□□□□□ -0.3
NCKAP1-201ENST00000360982 UNC79Q9P2D8 2635 aa13.2□□□□□ -0.3
NCKAP1-201ENST00000360982 VCANP13611 3396 aa13.19□□□□□ -0.3
NCKAP1-201ENST00000360982 TNP2Q05952 138 aa13.19□□□□□ -0.3
NCKAP1-201ENST00000360982 ANAPC11Q9NYG5 84 aa13.18□□□□□ -0.3
NCKAP1-201ENST00000360982 IGLV8-61A0A075B6I0 122 aa13.18□□□□□ -0.3
NCKAP1-201ENST00000360982 IGLV5-37A0A075B6J1 123 aa13.18□□□□□ -0.3
NCKAP1-201ENST00000360982 OXTP01178 125 aa13.18□□□□□ -0.3
NCKAP1-201ENST00000360982 C9orf92A6NGG3 77 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms