RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 H3BS24 57 aa8.96□□□□□ -0.98
SRGAP3-201ENST00000360413 LINC00483Q53H64 154 aa8.95□□□□□ -0.98
SRGAP3-201ENST00000360413 LINC00304Q8N9R0 145 aa8.95□□□□□ -0.98
SRGAP3-201ENST00000360413 LINC01554Q52M75 96 aa8.95□□□□□ -0.98
SRGAP3-201ENST00000360413 FLNBO75369 2602 aaKnown RBP8.95□□□□□ -0.98
SRGAP3-201ENST00000360413 WIPF1O43516 503 aa8.95□□□□□ -0.98
SRGAP3-201ENST00000360413 LITAFQ99732 161 aa8.94□□□□□ -0.98
SRGAP3-201ENST00000360413 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
SRGAP3-201ENST00000360413 IGLV6-57P01721 117 aa8.92□□□□□ -0.98
SRGAP3-201ENST00000360413 PHF5AQ7RTV0 110 aaKnown RBP8.92□□□□□ -0.98
SRGAP3-201ENST00000360413 CHTF8P0CG12 524 aa8.91□□□□□ -0.98
SRGAP3-201ENST00000360413 NBEAL1Q6ZS30 2694 aa8.91□□□□□ -0.98
SRGAP3-201ENST00000360413 DMBT1Q9UGM3 2413 aaPredicted RBP8.91□□□□□ -0.98
SRGAP3-201ENST00000360413 PRO3102Q9H379 93 aa8.89□□□□□ -0.99
SRGAP3-201ENST00000360413 A0A1B0GVX0 72 aa8.86□□□□□ -0.99
SRGAP3-201ENST00000360413 COL4A2P08572 1712 aa8.85□□□□□ -0.99
SRGAP3-201ENST00000360413 CDSNQ15517 529 aa8.85□□□□□ -0.99
SRGAP3-201ENST00000360413 Q1T7F1 81 aa8.84□□□□□ -0.99
SRGAP3-201ENST00000360413 SPANXA2-OT1Q8N9U9 137 aa8.84□□□□□ -0.99
SRGAP3-201ENST00000360413 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
SRGAP3-201ENST00000360413 ZNF861PO60384 105 aa8.84□□□□□ -0.99
SRGAP3-201ENST00000360413 KCNQ1DNQ9H478 68 aa8.84□□□□□ -0.99
SRGAP3-201ENST00000360413 LINC00588Q9Y4M8 146 aa8.83□□□□□ -1
SRGAP3-201ENST00000360413 CENPEQ02224 2701 aa8.82□□□□□ -1
SRGAP3-201ENST00000360413 KRTAP10-9P60411 292 aa8.81□□□□□ -1
SRGAP3-201ENST00000360413 FAM168BA1KXE4 195 aa8.81□□□□□ -1
SRGAP3-201ENST00000360413 C8orf17Q9NRJ1 99 aa8.81□□□□□ -1
SRGAP3-201ENST00000360413 Q8NAQ8 132 aa8.8□□□□□ -1
SRGAP3-201ENST00000360413 IGFL1Q6UW32 110 aa8.8□□□□□ -1
SRGAP3-201ENST00000360413 OBSCN-AS1Q96MR7 158 aa8.8□□□□□ -1
SRGAP3-201ENST00000360413 FLNAP21333 2647 aaKnown RBP8.79□□□□□ -1
SRGAP3-201ENST00000360413 CSNK1G2-AS1Q8NCQ2 148 aa8.79□□□□□ -1
SRGAP3-201ENST00000360413 A0A0D9SG42 100 aa8.79□□□□□ -1
SRGAP3-201ENST00000360413 DSCR10P59022 87 aa8.78□□□□□ -1
SRGAP3-201ENST00000360413 CENPFP49454 3210 aa8.78□□□□□ -1
SRGAP3-201ENST00000360413 PLA2G2DQ9UNK4 145 aa8.77□□□□□ -1.01
SRGAP3-201ENST00000360413 C9orf163Q8N9P6 203 aa8.77□□□□□ -1.01
SRGAP3-201ENST00000360413 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
SRGAP3-201ENST00000360413 FAM104AQ969W3 186 aa8.75□□□□□ -1.01
SRGAP3-201ENST00000360413 IGLV1-50A0A075B6I6 118 aa8.75□□□□□ -1.01
SRGAP3-201ENST00000360413 EIF4EBP3O60516 100 aaPredicted RBP8.75□□□□□ -1.01
SRGAP3-201ENST00000360413 HRES1P13985 223 aa8.74□□□□□ -1.01
SRGAP3-201ENST00000360413 HELZ2Q9BYK8 2649 aaKnown RBP8.73□□□□□ -1.01
SRGAP3-201ENST00000360413 Q8N377 158 aa8.72□□□□□ -1.01
SRGAP3-201ENST00000360413 TLX1NBP0CAT3 122 aa8.71□□□□□ -1.02
SRGAP3-201ENST00000360413 C15orf56Q8N910 161 aa8.7□□□□□ -1.02
SRGAP3-201ENST00000360413 ITPR3Q14573 2671 aa8.7□□□□□ -1.02
SRGAP3-201ENST00000360413 Q75L30 129 aa8.69□□□□□ -1.02
SRGAP3-201ENST00000360413 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
SRGAP3-201ENST00000360413 A0A0A0MQY5 61 aa8.67□□□□□ -1.02
SRGAP3-201ENST00000360413 A0A0G2JQZ4 141 aa8.66□□□□□ -1.02
SRGAP3-201ENST00000360413 A0A1W2PNN7 141 aa8.66□□□□□ -1.02
SRGAP3-201ENST00000360413 KMT2BQ9UMN6 2715 aaPredicted RBP8.66□□□□□ -1.02
SRGAP3-201ENST00000360413 Q5XG85 94 aa8.66□□□□□ -1.02
SRGAP3-201ENST00000360413 A0A1W2PPR1 153 aa8.66□□□□□ -1.02
SRGAP3-201ENST00000360413 C9orf92A6NGG3 77 aa8.65□□□□□ -1.03
SRGAP3-201ENST00000360413 IGLV5-48A0A075B6I7 105 aa8.64□□□□□ -1.03
SRGAP3-201ENST00000360413 IGLV7-43P04211 117 aa8.63□□□□□ -1.03
SRGAP3-201ENST00000360413 FAM229BQ4G0N7 80 aa8.63□□□□□ -1.03
SRGAP3-201ENST00000360413 Q6ZSA8 131 aa8.63□□□□□ -1.03
SRGAP3-201ENST00000360413 OCR1Q9BZK8 76 aa8.63□□□□□ -1.03
SRGAP3-201ENST00000360413 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
SRGAP3-201ENST00000360413 PRAC1Q96KF2 57 aa8.62□□□□□ -1.03
SRGAP3-201ENST00000360413 Q8N1X5 172 aa8.62□□□□□ -1.03
SRGAP3-201ENST00000360413 UNC79Q9P2D8 2635 aa8.62□□□□□ -1.03
SRGAP3-201ENST00000360413 PSORS1C2Q9UIG4 136 aa8.61□□□□□ -1.03
SRGAP3-201ENST00000360413 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
SRGAP3-201ENST00000360413 KRTAP24-1Q3LI83 254 aa8.6□□□□□ -1.03
SRGAP3-201ENST00000360413 A0A087WTM6 91 aa8.6□□□□□ -1.03
SRGAP3-201ENST00000360413 STAB2Q8WWQ8 2551 aa8.6□□□□□ -1.03
SRGAP3-201ENST00000360413 CNBPP62633 177 aaKnown RBP8.59□□□□□ -1.03
SRGAP3-201ENST00000360413 NOTCH1P46531 2555 aa8.59□□□□□ -1.03
SRGAP3-201ENST00000360413 CSAG1Q6PB30 78 aa8.58□□□□□ -1.04
SRGAP3-201ENST00000360413 KLK9Q2XQG4 91 aa8.57□□□□□ -1.04
SRGAP3-201ENST00000360413 C10orf142B7Z368 130 aa8.57□□□□□ -1.04
SRGAP3-201ENST00000360413 TEX15Q9BXT5 2789 aa8.57□□□□□ -1.04
SRGAP3-201ENST00000360413 M0R2T5 61 aa8.56□□□□□ -1.04
SRGAP3-201ENST00000360413 SPRR4Q96PI1 79 aa8.56□□□□□ -1.04
SRGAP3-201ENST00000360413 DMAC1Q96GE9 116 aa8.55□□□□□ -1.04
SRGAP3-201ENST00000360413 FP248Q71RG6 208 aaPredicted RBP8.54□□□□□ -1.04
SRGAP3-201ENST00000360413 A0A1B0GU33 70 aa8.54□□□□□ -1.04
SRGAP3-201ENST00000360413 A0A1W2PNM2 257 aa8.54□□□□□ -1.04
SRGAP3-201ENST00000360413 CHD6Q8TD26 2715 aa8.54□□□□□ -1.04
SRGAP3-201ENST00000360413 IGLV7-46A0A075B6I9 117 aa8.54□□□□□ -1.04
SRGAP3-201ENST00000360413 ZNF575Q86XF7 245 aa8.54□□□□□ -1.04
SRGAP3-201ENST00000360413 COL6A5A8TX70 2615 aa8.52□□□□□ -1.05
SRGAP3-201ENST00000360413 TNP2Q05952 138 aa8.52□□□□□ -1.05
SRGAP3-201ENST00000360413 Q8N9P0 234 aaPredicted RBP8.5□□□□□ -1.05
SRGAP3-201ENST00000360413 BAHCC1Q9P281 2608 aa8.49□□□□□ -1.05
SRGAP3-201ENST00000360413 Q5VV11 94 aa8.49□□□□□ -1.05
SRGAP3-201ENST00000360413 ANAPC11Q9NYG5 84 aa8.48□□□□□ -1.05
SRGAP3-201ENST00000360413 LINC01558Q9Y6Z2 57 aa8.47□□□□□ -1.05
SRGAP3-201ENST00000360413 C19orf73Q9NVV2 129 aa8.47□□□□□ -1.05
SRGAP3-201ENST00000360413 CYSTM1Q9H1C7 97 aa8.46□□□□□ -1.05
SRGAP3-201ENST00000360413 K7EIL1 84 aa8.46□□□□□ -1.06
SRGAP3-201ENST00000360413 S4R3F8 94 aa8.41□□□□□ -1.06
SRGAP3-201ENST00000360413 LINC00612Q8N6U2 182 aa8.4□□□□□ -1.06
SRGAP3-201ENST00000360413 TEP1Q99973 2627 aaKnown RBP8.4□□□□□ -1.06
SRGAP3-201ENST00000360413 SPINK7P58062 85 aa8.39□□□□□ -1.07
SRGAP3-201ENST00000360413 EP400Q96L91 3159 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms