RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 SPATA8Q6RVD6 105 aa2.82□□□□□ -1.96
PTPN22-201ENST00000359785 C18orf65Q6ZTR6 163 aa2.82□□□□□ -1.96
PTPN22-201ENST00000359785 VCANP13611 3396 aa2.82□□□□□ -1.96
PTPN22-201ENST00000359785 EP300Q09472 2414 aaPredicted RBP2.82□□□□□ -1.96
PTPN22-201ENST00000359785 ABCA4P78363 2273 aa2.81□□□□□ -1.96
PTPN22-201ENST00000359785 K7EQZ3 153 aa2.81□□□□□ -1.96
PTPN22-201ENST00000359785 ANAPC11Q9NYG5 84 aa2.81□□□□□ -1.96
PTPN22-201ENST00000359785 A0A0U1RRA0 63 aa2.81□□□□□ -1.96
PTPN22-201ENST00000359785 MP68P56378 58 aa2.81□□□□□ -1.96
PTPN22-201ENST00000359785 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
PTPN22-201ENST00000359785 IGKV3-7A0A075B6H7 116 aa2.8□□□□□ -1.96
PTPN22-201ENST00000359785 PRR3P79522 188 aaKnown RBP2.8□□□□□ -1.96
PTPN22-201ENST00000359785 LCE2CQ5TA81 110 aa2.8□□□□□ -1.96
PTPN22-201ENST00000359785 C7orf33Q8WU49 177 aa2.8□□□□□ -1.96
PTPN22-201ENST00000359785 USP24Q9UPU5 2620 aa2.8□□□□□ -1.96
PTPN22-201ENST00000359785 DNAH8Q96JB1 4490 aa2.8□□□□□ -1.96
PTPN22-201ENST00000359785 ST20-AS1Q8NBB2 130 aa2.8□□□□□ -1.96
PTPN22-201ENST00000359785 DNAH2Q9P225 4427 aa2.79□□□□□ -1.96
PTPN22-201ENST00000359785 TOMM7Q9P0U1 55 aa2.79□□□□□ -1.96
PTPN22-201ENST00000359785 ITPR1Q14643 2758 aa2.79□□□□□ -1.96
PTPN22-201ENST00000359785 SPTBN2O15020 2390 aa2.79□□□□□ -1.96
PTPN22-201ENST00000359785 CELSR3Q9NYQ7 3312 aa2.79□□□□□ -1.96
PTPN22-201ENST00000359785 PRM2P04554 102 aa2.79□□□□□ -1.96
PTPN22-201ENST00000359785 IGFL1Q6UW32 110 aa2.79□□□□□ -1.96
PTPN22-201ENST00000359785 ZFHX2Q9C0A1 2572 aaPredicted RBP2.79□□□□□ -1.96
PTPN22-201ENST00000359785 DMAC1Q96GE9 116 aa2.79□□□□□ -1.96
PTPN22-201ENST00000359785 PKHD1L1Q86WI1 4243 aa2.78□□□□□ -1.96
PTPN22-201ENST00000359785 DMXL2Q8TDJ6 3036 aa2.78□□□□□ -1.96
PTPN22-201ENST00000359785 DNAH10Q8IVF4 4471 aa2.78□□□□□ -1.96
PTPN22-201ENST00000359785 IGLV10-54A0A075B6I4 117 aa2.78□□□□□ -1.96
PTPN22-201ENST00000359785 KRTAP10-3P60369 221 aa2.78□□□□□ -1.96
PTPN22-201ENST00000359785 COA5Q86WW8 74 aa2.78□□□□□ -1.96
PTPN22-201ENST00000359785 ACACAQ13085 2346 aa2.78□□□□□ -1.96
PTPN22-201ENST00000359785 RELNP78509 3460 aa2.78□□□□□ -1.96
PTPN22-201ENST00000359785 MYO15AQ9UKN7 3530 aa2.78□□□□□ -1.96
PTPN22-201ENST00000359785 PKD1L2Q7Z442 2459 aa2.78□□□□□ -1.96
PTPN22-201ENST00000359785 LINC00476Q8WZB0 136 aa2.78□□□□□ -1.96
PTPN22-201ENST00000359785 KLK12Q9UKR0 248 aa2.78□□□□□ -1.96
PTPN22-201ENST00000359785 INAFM1C9JVW0 142 aa2.78□□□□□ -1.97
PTPN22-201ENST00000359785 PDZD2O15018 2839 aa2.77□□□□□ -1.97
PTPN22-201ENST00000359785 A8MUN3 132 aa2.77□□□□□ -1.97
PTPN22-201ENST00000359785 C9orf116Q5BN46 136 aaPredicted RBP2.77□□□□□ -1.97
PTPN22-201ENST00000359785 PIEZO1Q92508 2521 aa2.77□□□□□ -1.97
PTPN22-201ENST00000359785 H0Y9P7 68 aa2.77□□□□□ -1.97
PTPN22-201ENST00000359785 DEFB104AQ8WTQ1 72 aa2.77□□□□□ -1.97
PTPN22-201ENST00000359785 IGSF10Q6WRI0 2623 aa2.76□□□□□ -1.97
PTPN22-201ENST00000359785 CHTF8P0CG12 524 aa2.76□□□□□ -1.97
PTPN22-201ENST00000359785 XAGE1AQ9HD64 81 aa2.76□□□□□ -1.97
PTPN22-201ENST00000359785 SPART-AS1P0CW21 52 aa2.76□□□□□ -1.97
PTPN22-201ENST00000359785 SERTAD4-AS1Q5TG53 156 aa2.76□□□□□ -1.97
PTPN22-201ENST00000359785 PKHD1P08F94 4074 aa2.76□□□□□ -1.97
PTPN22-201ENST00000359785 DNAH9Q9NYC9 4486 aa2.75□□□□□ -1.97
PTPN22-201ENST00000359785 MPLKIPQ8TAP9 179 aa2.75□□□□□ -1.97
PTPN22-201ENST00000359785 MED13LQ71F56 2210 aa2.75□□□□□ -1.97
PTPN22-201ENST00000359785 C8orf87E5RJ46 101 aa2.75□□□□□ -1.97
PTPN22-201ENST00000359785 LYSTQ99698 3801 aa2.75□□□□□ -1.97
PTPN22-201ENST00000359785 CNOT1A5YKK6 2376 aaKnown RBP2.75□□□□□ -1.97
PTPN22-201ENST00000359785 IGKV2-24A0A0C4DH68 120 aa2.75□□□□□ -1.97
PTPN22-201ENST00000359785 ANGP03950 147 aaKnown RBP2.75□□□□□ -1.97
PTPN22-201ENST00000359785 DEFB136Q30KP8 78 aa2.75□□□□□ -1.97
PTPN22-201ENST00000359785 REG3GQ6UW15 175 aa2.75□□□□□ -1.97
PTPN22-201ENST00000359785 WFDC10AQ9H1F0 79 aa2.75□□□□□ -1.97
PTPN22-201ENST00000359785 TLN1Q9Y490 2541 aaKnown RBP2.75□□□□□ -1.97
PTPN22-201ENST00000359785 Q8N9L7 120 aa2.74□□□□□ -1.97
PTPN22-201ENST00000359785 CAMK2N2Q96S95 79 aa2.74□□□□□ -1.97
PTPN22-201ENST00000359785 PCNX1Q96RV3 2341 aa2.74□□□□□ -1.97
PTPN22-201ENST00000359785 SVEP1Q4LDE5 3571 aa2.74□□□□□ -1.97
PTPN22-201ENST00000359785 CASC2Q6XLA1 102 aa2.74□□□□□ -1.97
PTPN22-201ENST00000359785 DMXL1Q9Y485 3027 aa2.73□□□□□ -1.97
PTPN22-201ENST00000359785 HRES1P13985 223 aa2.73□□□□□ -1.97
PTPN22-201ENST00000359785 VPS13AQ96RL7 3174 aa2.73□□□□□ -1.97
PTPN22-201ENST00000359785 SACSQ9NZJ4 4579 aa2.73□□□□□ -1.97
PTPN22-201ENST00000359785 A0A087WSZ3 146 aa2.73□□□□□ -1.97
PTPN22-201ENST00000359785 FAM229AH3BQW9 127 aa2.73□□□□□ -1.97
PTPN22-201ENST00000359785 CNTRLQ7Z7A1 2325 aa2.73□□□□□ -1.97
PTPN22-201ENST00000359785 KMT2AQ03164 3969 aa2.73□□□□□ -1.97
PTPN22-201ENST00000359785 DSPP15924 2871 aaKnown RBP2.73□□□□□ -1.97
PTPN22-201ENST00000359785 DCHS1Q96JQ0 3298 aa2.73□□□□□ -1.97
PTPN22-201ENST00000359785 CFAP46Q8IYW2 2715 aa2.72□□□□□ -1.97
PTPN22-201ENST00000359785 KRTAP24-1Q3LI83 254 aa2.72□□□□□ -1.97
PTPN22-201ENST00000359785 NKAPP1Q8N9T2 125 aa2.72□□□□□ -1.97
PTPN22-201ENST00000359785 MAPK1IP1LQ8NDC0 245 aa2.72□□□□□ -1.97
PTPN22-201ENST00000359785 RIF1Q5UIP0 2472 aaKnown RBP2.71□□□□□ -1.97
PTPN22-201ENST00000359785 SCXQ7RTU7 201 aa2.71□□□□□ -1.98
PTPN22-201ENST00000359785 EYSQ5T1H1 3165 aa2.71□□□□□ -1.98
PTPN22-201ENST00000359785 TENM2Q9NT68 2774 aa2.71□□□□□ -1.98
PTPN22-201ENST00000359785 ANKRD17O75179 2603 aaKnown RBP2.71□□□□□ -1.98
PTPN22-201ENST00000359785 A0A1B0GVX0 72 aa2.71□□□□□ -1.98
PTPN22-201ENST00000359785 C8orf17Q9NRJ1 99 aa2.71□□□□□ -1.98
PTPN22-201ENST00000359785 FRAS1Q86XX4 4008 aa2.7□□□□□ -1.98
PTPN22-201ENST00000359785 PRR15LQ9BU68 103 aa2.7□□□□□ -1.98
PTPN22-201ENST00000359785 MYO18BQ8IUG5 2567 aa2.7□□□□□ -1.98
PTPN22-201ENST00000359785 CHKB-CPT1BH3BT56 60 aa2.7□□□□□ -1.98
PTPN22-201ENST00000359785 MAP1BP46821 2468 aaKnown RBP2.69□□□□□ -1.98
PTPN22-201ENST00000359785 IGF2RP11717 2491 aa2.69□□□□□ -1.98
PTPN22-201ENST00000359785 RPS29P62273 56 aaKnown RBP2.69□□□□□ -1.98
PTPN22-201ENST00000359785 ATMQ13315 3056 aa2.69□□□□□ -1.98
PTPN22-201ENST00000359785 HTN1P15515 57 aa2.69□□□□□ -1.98
PTPN22-201ENST00000359785 C14orf177Q52M58 125 aa2.69□□□□□ -1.98
PTPN22-201ENST00000359785 LINC01554Q52M75 96 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms