RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.05
SMC4-202ENST00000357388 PKD1L2Q7Z442 2459 aa8.46□□□□□ -1.06
SMC4-202ENST00000357388 FAM168BA1KXE4 195 aa8.46□□□□□ -1.06
SMC4-202ENST00000357388 RBM12B-AS1Q9P1G2 102 aa8.46□□□□□ -1.06
SMC4-202ENST00000357388 Q75L30 129 aa8.45□□□□□ -1.06
SMC4-202ENST00000357388 OBSCN-AS1Q96MR7 158 aa8.44□□□□□ -1.06
SMC4-202ENST00000357388 PRR34Q9NV39 138 aa8.44□□□□□ -1.06
SMC4-202ENST00000357388 ZNF861PO60384 105 aa8.43□□□□□ -1.06
SMC4-202ENST00000357388 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
SMC4-202ENST00000357388 SETD2Q9BYW2 2564 aaPredicted RBP8.41□□□□□ -1.06
SMC4-202ENST00000357388 PTPRBP23467 1997 aa8.41□□□□□ -1.06
SMC4-202ENST00000357388 USP9YO00507 2555 aaPredicted RBP8.4□□□□□ -1.06
SMC4-202ENST00000357388 OCR1Q9BZK8 76 aa8.4□□□□□ -1.07
SMC4-202ENST00000357388 K7EIL1 84 aa8.39□□□□□ -1.07
SMC4-202ENST00000357388 IGLV5-37A0A075B6J1 123 aa8.38□□□□□ -1.07
SMC4-202ENST00000357388 A0A1W2PNM2 257 aa8.37□□□□□ -1.07
SMC4-202ENST00000357388 IGLV5-48A0A075B6I7 105 aa8.37□□□□□ -1.07
SMC4-202ENST00000357388 A0A087WTM6 91 aa8.37□□□□□ -1.07
SMC4-202ENST00000357388 IGLV7-46A0A075B6I9 117 aa8.36□□□□□ -1.07
SMC4-202ENST00000357388 H3BS24 57 aa8.36□□□□□ -1.07
SMC4-202ENST00000357388 A0A0A0MQY5 61 aa8.36□□□□□ -1.07
SMC4-202ENST00000357388 C19orf73Q9NVV2 129 aa8.36□□□□□ -1.07
SMC4-202ENST00000357388 C9orf163Q8N9P6 203 aa8.35□□□□□ -1.07
SMC4-202ENST00000357388 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
SMC4-202ENST00000357388 CSNK1G2-AS1Q8NCQ2 148 aa8.34□□□□□ -1.07
SMC4-202ENST00000357388 LINC01558Q9Y6Z2 57 aa8.34□□□□□ -1.07
SMC4-202ENST00000357388 ANKRD11Q6UB99 2663 aaPredicted RBP8.34□□□□□ -1.07
SMC4-202ENST00000357388 C9orf92A6NGG3 77 aa8.33□□□□□ -1.08
SMC4-202ENST00000357388 A0A0D9SG42 100 aa8.32□□□□□ -1.08
SMC4-202ENST00000357388 DMAC1Q96GE9 116 aa8.31□□□□□ -1.08
SMC4-202ENST00000357388 COL4A2P08572 1712 aa8.31□□□□□ -1.08
SMC4-202ENST00000357388 FASNP49327 2511 aaKnown RBP8.31□□□□□ -1.08
SMC4-202ENST00000357388 LINC00612Q8N6U2 182 aa8.31□□□□□ -1.08
SMC4-202ENST00000357388 SPRR4Q96PI1 79 aa8.31□□□□□ -1.08
SMC4-202ENST00000357388 IGLV7-43P04211 117 aa8.31□□□□□ -1.08
SMC4-202ENST00000357388 Q5XG85 94 aa8.31□□□□□ -1.08
SMC4-202ENST00000357388 MTORP42345 2549 aa8.31□□□□□ -1.08
SMC4-202ENST00000357388 KRTAP10-11P60412 298 aa8.3□□□□□ -1.08
SMC4-202ENST00000357388 SMR3BP02814 79 aaPredicted RBP8.29□□□□□ -1.08
SMC4-202ENST00000357388 A0A1B0GU33 70 aa8.29□□□□□ -1.08
SMC4-202ENST00000357388 CEP295Q9C0D2 2601 aa8.28□□□□□ -1.08
SMC4-202ENST00000357388 PRR26Q8N8Z3 221 aa8.27□□□□□ -1.08
SMC4-202ENST00000357388 Q8N1X5 172 aa8.26□□□□□ -1.09
SMC4-202ENST00000357388 Q8N9P0 234 aaPredicted RBP8.25□□□□□ -1.09
SMC4-202ENST00000357388 CNBPP62633 177 aaKnown RBP8.24□□□□□ -1.09
SMC4-202ENST00000357388 COL27A1Q8IZC6 1860 aaPredicted RBP8.24□□□□□ -1.09
SMC4-202ENST00000357388 A0A0G2JQZ4 141 aa8.23□□□□□ -1.09
SMC4-202ENST00000357388 A0A1W2PNN7 141 aa8.23□□□□□ -1.09
SMC4-202ENST00000357388 ZNF575Q86XF7 245 aa8.23□□□□□ -1.09
SMC4-202ENST00000357388 ACANP16112 2415 aa8.22□□□□□ -1.09
SMC4-202ENST00000357388 PSORS1C2Q9UIG4 136 aa8.22□□□□□ -1.09
SMC4-202ENST00000357388 POLQO75417 2590 aa8.2□□□□□ -1.1
SMC4-202ENST00000357388 SPTBN4Q9H254 2564 aa8.19□□□□□ -1.1
SMC4-202ENST00000357388 FP248Q71RG6 208 aaPredicted RBP8.19□□□□□ -1.1
SMC4-202ENST00000357388 Q6ZSA8 131 aa8.19□□□□□ -1.1
SMC4-202ENST00000357388 HRES1P13985 223 aa8.18□□□□□ -1.1
SMC4-202ENST00000357388 ANKRD17O75179 2603 aaKnown RBP8.17□□□□□ -1.1
SMC4-202ENST00000357388 Q5VV11 94 aa8.17□□□□□ -1.1
SMC4-202ENST00000357388 ASB16-AS1Q495Z4 193 aa8.16□□□□□ -1.1
SMC4-202ENST00000357388 GIG44P09565 113 aaPredicted RBP8.15□□□□□ -1.1
SMC4-202ENST00000357388 FAM229BQ4G0N7 80 aa8.15□□□□□ -1.1
SMC4-202ENST00000357388 PRAC1Q96KF2 57 aa8.15□□□□□ -1.11
SMC4-202ENST00000357388 ANAPC11Q9NYG5 84 aa8.15□□□□□ -1.11
SMC4-202ENST00000357388 CAMK2N1Q7Z7J9 78 aa8.14□□□□□ -1.11
SMC4-202ENST00000357388 A0A096LNT2 108 aa8.13□□□□□ -1.11
SMC4-202ENST00000357388 CSAG1Q6PB30 78 aa8.13□□□□□ -1.11
SMC4-202ENST00000357388 KRTAP10-3P60369 221 aa8.11□□□□□ -1.11
SMC4-202ENST00000357388 M0R2T5 61 aa8.1□□□□□ -1.11
SMC4-202ENST00000357388 MMP24-AS1A0A0U1RRL7 71 aa8.09□□□□□ -1.11
SMC4-202ENST00000357388 SPINK7P58062 85 aa8.03□□□□□ -1.12
SMC4-202ENST00000357388 CASC10Q5T4H9 136 aa8.03□□□□□ -1.12
SMC4-202ENST00000357388 ZCCHC13Q8WW36 166 aaKnown RBP8.03□□□□□ -1.12
SMC4-202ENST00000357388 TNP2Q05952 138 aa8.03□□□□□ -1.12
SMC4-202ENST00000357388 ROMO1P60602 79 aa8.02□□□□□ -1.13
SMC4-202ENST00000357388 CYSTM1Q9H1C7 97 aa8.01□□□□□ -1.13
SMC4-202ENST00000357388 S4R3F8 94 aa7.98□□□□□ -1.13
SMC4-202ENST00000357388 MGAM2Q2M2H8 2515 aa7.97□□□□□ -1.13
SMC4-202ENST00000357388 RPL37P61927 97 aaKnown RBP7.96□□□□□ -1.13
SMC4-202ENST00000357388 Q5W150 140 aa7.96□□□□□ -1.13
SMC4-202ENST00000357388 PCSK5Q92824 1860 aa7.96□□□□□ -1.14
SMC4-202ENST00000357388 SPRR1AP35321 89 aa7.95□□□□□ -1.14
SMC4-202ENST00000357388 WDR87Q6ZQQ6 2873 aa7.95□□□□□ -1.14
SMC4-202ENST00000357388 SPRR1BP22528 89 aa7.95□□□□□ -1.14
SMC4-202ENST00000357388 EPG5Q9HCE0 2579 aa7.94□□□□□ -1.14
SMC4-202ENST00000357388 FLNBO75369 2602 aaKnown RBP7.94□□□□□ -1.14
SMC4-202ENST00000357388 LINC00472Q9H8W2 130 aa7.93□□□□□ -1.14
SMC4-202ENST00000357388 KRTAP1-3Q8IUG1 177 aa7.93□□□□□ -1.14
SMC4-202ENST00000357388 USP24Q9UPU5 2620 aa7.93□□□□□ -1.14
SMC4-202ENST00000357388 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.92□□□□□ -1.14
SMC4-202ENST00000357388 KRTAP1-1Q07627 177 aa7.92□□□□□ -1.14
SMC4-202ENST00000357388 KRTAP16-1A8MUX0 517 aa7.91□□□□□ -1.14
SMC4-202ENST00000357388 OXTP01178 125 aa7.91□□□□□ -1.14
SMC4-202ENST00000357388 SEC61BP60468 96 aaKnown RBP7.91□□□□□ -1.14
SMC4-202ENST00000357388 H1FX-AS1Q4G0G2 97 aa7.88□□□□□ -1.15
SMC4-202ENST00000357388 PLAC8Q9NZF1 115 aa7.88□□□□□ -1.15
SMC4-202ENST00000357388 R4GN34 69 aa7.85□□□□□ -1.15
SMC4-202ENST00000357388 HECTD1Q9ULT8 2610 aa7.82□□□□□ -1.16
SMC4-202ENST00000357388 Q6ZR54 194 aa7.81□□□□□ -1.16
SMC4-202ENST00000357388 CR1P17927 2039 aa7.8□□□□□ -1.16
SMC4-202ENST00000357388 SPATA8Q6RVD6 105 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms