RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 NCOR2Q9Y618 2525 aa8.31□□□□□ -1.08
SYNCRIP-201ENST00000355238 PLA2G1BP04054 148 aaKnown RBP8.31□□□□□ -1.08
SYNCRIP-201ENST00000355238 LINC00612Q8N6U2 182 aa8.3□□□□□ -1.08
SYNCRIP-201ENST00000355238 Q75L30 129 aa8.3□□□□□ -1.08
SYNCRIP-201ENST00000355238 PKD1L2Q7Z442 2459 aa8.3□□□□□ -1.08
SYNCRIP-201ENST00000355238 WDR87Q6ZQQ6 2873 aa8.29□□□□□ -1.08
SYNCRIP-201ENST00000355238 APLNQ9ULZ1 77 aa8.29□□□□□ -1.08
SYNCRIP-201ENST00000355238 TLN2Q9Y4G6 2542 aa8.28□□□□□ -1.08
SYNCRIP-201ENST00000355238 FAM104AQ969W3 186 aa8.28□□□□□ -1.08
SYNCRIP-201ENST00000355238 A0A0G2JQZ4 141 aa8.27□□□□□ -1.09
SYNCRIP-201ENST00000355238 A0A1W2PNN7 141 aa8.27□□□□□ -1.09
SYNCRIP-201ENST00000355238 PCSK5Q92824 1860 aa8.25□□□□□ -1.09
SYNCRIP-201ENST00000355238 LRRK2Q5S007 2527 aa8.25□□□□□ -1.09
SYNCRIP-201ENST00000355238 FP248Q71RG6 208 aaPredicted RBP8.25□□□□□ -1.09
SYNCRIP-201ENST00000355238 GIG44P09565 113 aaPredicted RBP8.24□□□□□ -1.09
SYNCRIP-201ENST00000355238 IGLV7-46A0A075B6I9 117 aa8.24□□□□□ -1.09
SYNCRIP-201ENST00000355238 SETD2Q9BYW2 2564 aaPredicted RBP8.24□□□□□ -1.09
SYNCRIP-201ENST00000355238 ZNF861PO60384 105 aa8.24□□□□□ -1.09
SYNCRIP-201ENST00000355238 JMJD1CQ15652 2540 aa8.23□□□□□ -1.09
SYNCRIP-201ENST00000355238 USP9YO00507 2555 aaPredicted RBP8.23□□□□□ -1.09
SYNCRIP-201ENST00000355238 ZNF575Q86XF7 245 aa8.22□□□□□ -1.09
SYNCRIP-201ENST00000355238 LINC01554Q52M75 96 aa8.22□□□□□ -1.09
SYNCRIP-201ENST00000355238 SPRR4Q96PI1 79 aa8.22□□□□□ -1.09
SYNCRIP-201ENST00000355238 IGLV5-37A0A075B6J1 123 aa8.2□□□□□ -1.1
SYNCRIP-201ENST00000355238 FAM229BQ4G0N7 80 aa8.2□□□□□ -1.1
SYNCRIP-201ENST00000355238 C19orf73Q9NVV2 129 aa8.2□□□□□ -1.1
SYNCRIP-201ENST00000355238 C9orf163Q8N9P6 203 aa8.19□□□□□ -1.1
SYNCRIP-201ENST00000355238 CYSTM1Q9H1C7 97 aa8.19□□□□□ -1.1
SYNCRIP-201ENST00000355238 PRR26Q8N8Z3 221 aa8.19□□□□□ -1.1
SYNCRIP-201ENST00000355238 LINC01558Q9Y6Z2 57 aa8.19□□□□□ -1.1
SYNCRIP-201ENST00000355238 PIEZO1Q92508 2521 aa8.19□□□□□ -1.1
SYNCRIP-201ENST00000355238 Q8N9P0 234 aaPredicted RBP8.19□□□□□ -1.1
SYNCRIP-201ENST00000355238 ZFYVE26Q68DK2 2539 aa8.16□□□□□ -1.1
SYNCRIP-201ENST00000355238 A0A096LNT2 108 aa8.16□□□□□ -1.1
SYNCRIP-201ENST00000355238 H3BS24 57 aa8.15□□□□□ -1.1
SYNCRIP-201ENST00000355238 Q5VV11 94 aa8.12□□□□□ -1.11
SYNCRIP-201ENST00000355238 LINC00304Q8N9R0 145 aa8.12□□□□□ -1.11
SYNCRIP-201ENST00000355238 CNBPP62633 177 aaKnown RBP8.12□□□□□ -1.11
SYNCRIP-201ENST00000355238 LUZP6Q538Z0 58 aa8.11□□□□□ -1.11
SYNCRIP-201ENST00000355238 Q8N1X5 172 aa8.09□□□□□ -1.11
SYNCRIP-201ENST00000355238 KRTAP24-1Q3LI83 254 aa8.08□□□□□ -1.12
SYNCRIP-201ENST00000355238 IGLV7-43P04211 117 aa8.07□□□□□ -1.12
SYNCRIP-201ENST00000355238 A0A0D9SG42 100 aa8.07□□□□□ -1.12
SYNCRIP-201ENST00000355238 OXTP01178 125 aa8.07□□□□□ -1.12
SYNCRIP-201ENST00000355238 F8P00451 2351 aa8.07□□□□□ -1.12
SYNCRIP-201ENST00000355238 ANAPC11Q9NYG5 84 aa8.06□□□□□ -1.12
SYNCRIP-201ENST00000355238 ANKRD11Q6UB99 2663 aaPredicted RBP8.06□□□□□ -1.12
SYNCRIP-201ENST00000355238 PRAC1Q96KF2 57 aa8.06□□□□□ -1.12
SYNCRIP-201ENST00000355238 PSORS1C2Q9UIG4 136 aa8.05□□□□□ -1.12
SYNCRIP-201ENST00000355238 A0A1B0GU33 70 aa8.05□□□□□ -1.12
SYNCRIP-201ENST00000355238 HRES1P13985 223 aa8.05□□□□□ -1.12
SYNCRIP-201ENST00000355238 C9orf92A6NGG3 77 aa8.04□□□□□ -1.12
SYNCRIP-201ENST00000355238 A0A087WTM6 91 aa8.04□□□□□ -1.12
SYNCRIP-201ENST00000355238 MTORP42345 2549 aa8.03□□□□□ -1.12
SYNCRIP-201ENST00000355238 CASC10Q5T4H9 136 aa8.02□□□□□ -1.13
SYNCRIP-201ENST00000355238 MMP24-AS1A0A0U1RRL7 71 aa8.02□□□□□ -1.13
SYNCRIP-201ENST00000355238 CEP295Q9C0D2 2601 aa8.01□□□□□ -1.13
SYNCRIP-201ENST00000355238 KRTAP10-11P60412 298 aa8.01□□□□□ -1.13
SYNCRIP-201ENST00000355238 CR1P17927 2039 aa8□□□□□ -1.13
SYNCRIP-201ENST00000355238 ANKRD17O75179 2603 aaKnown RBP7.99□□□□□ -1.13
SYNCRIP-201ENST00000355238 CSAG1Q6PB30 78 aa7.98□□□□□ -1.13
SYNCRIP-201ENST00000355238 J3QL48 77 aa7.98□□□□□ -1.13
SYNCRIP-201ENST00000355238 SPINK7P58062 85 aa7.98□□□□□ -1.13
SYNCRIP-201ENST00000355238 PCNTO95613 3336 aa7.97□□□□□ -1.13
SYNCRIP-201ENST00000355238 DMAC1Q96GE9 116 aa7.97□□□□□ -1.13
SYNCRIP-201ENST00000355238 CENPFP49454 3210 aa7.96□□□□□ -1.14
SYNCRIP-201ENST00000355238 CHD8Q9HCK8 2581 aa7.96□□□□□ -1.14
SYNCRIP-201ENST00000355238 K7EIL1 84 aa7.95□□□□□ -1.14
SYNCRIP-201ENST00000355238 KRTAP10-3P60369 221 aa7.94□□□□□ -1.14
SYNCRIP-201ENST00000355238 SPRR1AP35321 89 aa7.94□□□□□ -1.14
SYNCRIP-201ENST00000355238 Q8NDZ9 215 aa7.93□□□□□ -1.14
SYNCRIP-201ENST00000355238 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
SYNCRIP-201ENST00000355238 WWC2-AS2Q96NR7 200 aa7.91□□□□□ -1.14
SYNCRIP-201ENST00000355238 LINC00472Q9H8W2 130 aa7.9□□□□□ -1.14
SYNCRIP-201ENST00000355238 COX6B2Q6YFQ2 88 aa7.89□□□□□ -1.15
SYNCRIP-201ENST00000355238 CEP350Q5VT06 3117 aa7.89□□□□□ -1.15
SYNCRIP-201ENST00000355238 POLQO75417 2590 aa7.89□□□□□ -1.15
SYNCRIP-201ENST00000355238 A0A0A0MQY5 61 aa7.88□□□□□ -1.15
SYNCRIP-201ENST00000355238 SPRR1BP22528 89 aa7.87□□□□□ -1.15
SYNCRIP-201ENST00000355238 ACANP16112 2415 aa7.86□□□□□ -1.15
SYNCRIP-201ENST00000355238 Q5W150 140 aa7.85□□□□□ -1.15
SYNCRIP-201ENST00000355238 LINC00483Q53H64 154 aa7.84□□□□□ -1.15
SYNCRIP-201ENST00000355238 ZCCHC13Q8WW36 166 aaKnown RBP7.83□□□□□ -1.16
SYNCRIP-201ENST00000355238 SPTBN4Q9H254 2564 aa7.83□□□□□ -1.16
SYNCRIP-201ENST00000355238 DNAH12Q6ZR08 3092 aa7.82□□□□□ -1.16
SYNCRIP-201ENST00000355238 HTTP42858 3142 aa7.77□□□□□ -1.17
SYNCRIP-201ENST00000355238 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.77□□□□□ -1.17
SYNCRIP-201ENST00000355238 TNP2Q05952 138 aa7.76□□□□□ -1.17
SYNCRIP-201ENST00000355238 ROMO1P60602 79 aa7.76□□□□□ -1.17
SYNCRIP-201ENST00000355238 CAMK2N1Q7Z7J9 78 aa7.76□□□□□ -1.17
SYNCRIP-201ENST00000355238 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
SYNCRIP-201ENST00000355238 Q6ZR54 194 aa7.74□□□□□ -1.17
SYNCRIP-201ENST00000355238 KRTAP26-1Q6PEX3 210 aa7.73□□□□□ -1.17
SYNCRIP-201ENST00000355238 KRTAP1-3Q8IUG1 177 aa7.73□□□□□ -1.17
SYNCRIP-201ENST00000355238 RPL37P61927 97 aaKnown RBP7.72□□□□□ -1.17
SYNCRIP-201ENST00000355238 PLAC8Q9NZF1 115 aa7.71□□□□□ -1.18
SYNCRIP-201ENST00000355238 KRTAP29-1A8MX34 341 aaPredicted RBP7.71□□□□□ -1.18
SYNCRIP-201ENST00000355238 A6NN06 94 aa7.7□□□□□ -1.18
SYNCRIP-201ENST00000355238 S4R3F8 94 aa7.7□□□□□ -1.18
SYNCRIP-201ENST00000355238 BRCA2P51587 3418 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms