RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 Q9BRP9 147 aa3.36□□□□□ -1.87
HMBOX1-202ENST00000355231 SND1-IT1Q9HBX3 110 aa3.36□□□□□ -1.87
HMBOX1-202ENST00000355231 C11orf21Q9P2W6 132 aa3.36□□□□□ -1.87
HMBOX1-202ENST00000355231 CELA1Q9UNI1 258 aa3.36□□□□□ -1.87
HMBOX1-202ENST00000355231 IGHV3OR16-13A0A075B7E8 117 aa3.36□□□□□ -1.87
HMBOX1-202ENST00000355231 IGHV3-49A0A0A0MS15 119 aa3.36□□□□□ -1.87
HMBOX1-202ENST00000355231 IGHV3-74A0A0B4J1X5 117 aa3.36□□□□□ -1.87
HMBOX1-202ENST00000355231 SCXQ7RTU7 201 aa3.36□□□□□ -1.87
HMBOX1-202ENST00000355231 CDC42SE2Q9NRR3 84 aa3.36□□□□□ -1.87
HMBOX1-202ENST00000355231 IGHV3-11P01762 117 aa3.35□□□□□ -1.87
HMBOX1-202ENST00000355231 LINC00315P59091 139 aa3.35□□□□□ -1.87
HMBOX1-202ENST00000355231 C9orf129Q5T035 196 aaKnown RBP3.35□□□□□ -1.87
HMBOX1-202ENST00000355231 ZFAND2AQ8N6M9 145 aa3.35□□□□□ -1.87
HMBOX1-202ENST00000355231 Q8N814 137 aa3.35□□□□□ -1.87
HMBOX1-202ENST00000355231 SPANXA2-OT1Q8N9U9 137 aa3.35□□□□□ -1.87
HMBOX1-202ENST00000355231 C11orf72Q8NBR9 251 aa3.35□□□□□ -1.87
HMBOX1-202ENST00000355231 ZNF702PQ9H963 129 aa3.35□□□□□ -1.87
HMBOX1-202ENST00000355231 WNK1Q9H4A3 2382 aa3.35□□□□□ -1.87
HMBOX1-202ENST00000355231 PLA2G1BP04054 148 aaKnown RBP3.34□□□□□ -1.87
HMBOX1-202ENST00000355231 PRR9Q5T870 116 aa3.34□□□□□ -1.87
HMBOX1-202ENST00000355231 NTM-AS1Q6ZSK4 140 aa3.34□□□□□ -1.87
HMBOX1-202ENST00000355231 NOTCH2NLQ7Z3S9 236 aa3.34□□□□□ -1.87
HMBOX1-202ENST00000355231 LINC01006Q8NI28 216 aa3.34□□□□□ -1.87
HMBOX1-202ENST00000355231 PRR15LQ9BU68 103 aa3.34□□□□□ -1.87
HMBOX1-202ENST00000355231 RHPN1-AS1Q9BWJ2 59 aa3.34□□□□□ -1.87
HMBOX1-202ENST00000355231 M0QY20 66 aa3.33□□□□□ -1.88
HMBOX1-202ENST00000355231 PROK1P58294 105 aa3.33□□□□□ -1.88
HMBOX1-202ENST00000355231 C10orf99Q6UWK7 81 aa3.33□□□□□ -1.88
HMBOX1-202ENST00000355231 LINC00337Q8N6G1 96 aa3.33□□□□□ -1.88
HMBOX1-202ENST00000355231 Q8N9P0 234 aaPredicted RBP3.33□□□□□ -1.88
HMBOX1-202ENST00000355231 HIGD2AQ9BW72 106 aa3.33□□□□□ -1.88
HMBOX1-202ENST00000355231 H3BPC8 53 aa3.33□□□□□ -1.88
HMBOX1-202ENST00000355231 RNASE3P12724 160 aaKnown RBP3.33□□□□□ -1.88
HMBOX1-202ENST00000355231 C6orf99Q4VX62 202 aa3.33□□□□□ -1.88
HMBOX1-202ENST00000355231 B9D2Q9BPU9 175 aa3.33□□□□□ -1.88
HMBOX1-202ENST00000355231 IGHV3-38A0A0C4DH36 116 aa3.32□□□□□ -1.88
HMBOX1-202ENST00000355231 K7EQG2 157 aa3.32□□□□□ -1.88
HMBOX1-202ENST00000355231 ZCCHC13Q8WW36 166 aaKnown RBP3.32□□□□□ -1.88
HMBOX1-202ENST00000355231 LINC00208Q96KT6 92 aa3.32□□□□□ -1.88
HMBOX1-202ENST00000355231 CDKN2A-AS1Q9UH64 79 aa3.32□□□□□ -1.88
HMBOX1-202ENST00000355231 TRBV6-4A0A1B0GX49 114 aa3.31□□□□□ -1.88
HMBOX1-202ENST00000355231 DEFB1P60022 68 aa3.31□□□□□ -1.88
HMBOX1-202ENST00000355231 PRR3P79522 188 aaKnown RBP3.31□□□□□ -1.88
HMBOX1-202ENST00000355231 MOBPQ13875 183 aa3.31□□□□□ -1.88
HMBOX1-202ENST00000355231 KMT2CQ8NEZ4 4911 aaKnown RBP3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 IGKV2-28A0A075B6P5 120 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 IGHV6-1A0A0B4J1U7 121 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 ETDCA0A1B0GVM5 59 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 LRCOL1A6NCL2 159 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 A8MTW9 85 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 SMIM1B2RUZ4 78 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 IGKV2D-28P01615 120 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 PCLOQ9Y6V0 5065 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 COL7A1Q02388 2944 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 RYR3Q15413 4870 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 NOTCH3Q9UM47 2321 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 Q6ZTI0 123 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 C4orf3Q8WVX3 66 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 RETNLBQ9BQ08 111 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 FAM30AQ9NZY2 134 aa3.3□□□□□ -1.88
HMBOX1-202ENST00000355231 DNAH3Q8TD57 4116 aa3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 IGKV3-7A0A075B6H7 116 aa3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 IGHV3-73A0A0B4J1V6 119 aa3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 K7EQD1 137 aa3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 PRB2P02812 416 aaPredicted RBP3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 SLPIP03973 132 aa3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 IGKV4-1P06312 121 aa3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 COX7BP24311 80 aa3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 LINC00158P58513 81 aa3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 RNASE13Q5GAN3 156 aaKnown RBP3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 C18orf65Q6ZTR6 163 aa3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 MUC7Q8TAX7 377 aa3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 DNAH9Q9NYC9 4486 aa3.29□□□□□ -1.88
HMBOX1-202ENST00000355231 TRGV2A0A075B6R0 118 aa3.28□□□□□ -1.88
HMBOX1-202ENST00000355231 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.28□□□□□ -1.88
HMBOX1-202ENST00000355231 ZNF706Q9Y5V0 76 aaPredicted RBP3.28□□□□□ -1.88
HMBOX1-202ENST00000355231 MUC4Q99102 2169 aa3.28□□□□□ -1.89
HMBOX1-202ENST00000355231 IGHV3-16A0A0C4DH30 117 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 SLURP1P55000 103 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 CCL18P55774 89 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 DEFB136Q30KP8 78 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 LINC00575Q6W349 94 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 COX7B2Q8TF08 81 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 LINC00467Q9BRT7 94 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 WFDC10AQ9H1F0 79 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 XAGE1AQ9HD64 81 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 LINC01558Q9Y6Z2 57 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 NANOS2P60321 138 aaKnown RBP3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 LINC00242Q5T6M2 205 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 KPRPQ5T749 579 aaPredicted RBP3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 FAM104AQ969W3 186 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 CHCHD7Q9BUK0 85 aa3.27□□□□□ -1.89
HMBOX1-202ENST00000355231 SPINK13Q1W4C9 94 aa3.26□□□□□ -1.89
HMBOX1-202ENST00000355231 HIGD2BQ4VC39 106 aa3.26□□□□□ -1.89
HMBOX1-202ENST00000355231 MAP6D1Q9H9H5 199 aa3.26□□□□□ -1.89
HMBOX1-202ENST00000355231 PLA2G2DQ9UNK4 145 aa3.26□□□□□ -1.89
HMBOX1-202ENST00000355231 SORL1Q92673 2214 aa3.25□□□□□ -1.89
HMBOX1-202ENST00000355231 A8MU10 97 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms