RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
SCN8A-202ENST00000355133 PRR34Q9NV39 138 aa8.69□□□□□ -1.02
SCN8A-202ENST00000355133 F8P00451 2351 aa8.69□□□□□ -1.02
SCN8A-202ENST00000355133 OBSCN-AS1Q96MR7 158 aa8.69□□□□□ -1.02
SCN8A-202ENST00000355133 A0A087WTM6 91 aa8.68□□□□□ -1.02
SCN8A-202ENST00000355133 ANAPC11Q9NYG5 84 aa8.68□□□□□ -1.02
SCN8A-202ENST00000355133 ZNF861PO60384 105 aa8.68□□□□□ -1.02
SCN8A-202ENST00000355133 COA5Q86WW8 74 aa8.66□□□□□ -1.02
SCN8A-202ENST00000355133 C8orf17Q9NRJ1 99 aa8.66□□□□□ -1.02
SCN8A-202ENST00000355133 LINC01600Q96MT4 127 aa8.66□□□□□ -1.02
SCN8A-202ENST00000355133 Q8N377 158 aa8.65□□□□□ -1.03
SCN8A-202ENST00000355133 RPS28P62857 69 aaKnown RBP8.64□□□□□ -1.03
SCN8A-202ENST00000355133 GOLGB1Q14789 3259 aaKnown RBP8.63□□□□□ -1.03
SCN8A-202ENST00000355133 PRR15Q8IV56 129 aa8.63□□□□□ -1.03
SCN8A-202ENST00000355133 CASC10Q5T4H9 136 aa8.62□□□□□ -1.03
SCN8A-202ENST00000355133 SSBP3-AS1Q7Z2R9 100 aa8.62□□□□□ -1.03
SCN8A-202ENST00000355133 A0A1B0GVX0 72 aa8.62□□□□□ -1.03
SCN8A-202ENST00000355133 C9orf163Q8N9P6 203 aa8.62□□□□□ -1.03
SCN8A-202ENST00000355133 SPINT4Q6UDR6 99 aa8.61□□□□□ -1.03
SCN8A-202ENST00000355133 LINC00612Q8N6U2 182 aa8.61□□□□□ -1.03
SCN8A-202ENST00000355133 APLNQ9ULZ1 77 aa8.6□□□□□ -1.03
SCN8A-202ENST00000355133 A8MUN3 132 aa8.6□□□□□ -1.03
SCN8A-202ENST00000355133 IGLV7-43P04211 117 aa8.58□□□□□ -1.04
SCN8A-202ENST00000355133 TLX1NBP0CAT3 122 aa8.58□□□□□ -1.04
SCN8A-202ENST00000355133 PSORS1C2Q9UIG4 136 aa8.58□□□□□ -1.04
SCN8A-202ENST00000355133 ERC2-IT1O76042 136 aa8.58□□□□□ -1.04
SCN8A-202ENST00000355133 EPG5Q9HCE0 2579 aa8.57□□□□□ -1.04
SCN8A-202ENST00000355133 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
SCN8A-202ENST00000355133 KRTAP1-3Q8IUG1 177 aa8.55□□□□□ -1.04
SCN8A-202ENST00000355133 UQCR11O14957 56 aa8.54□□□□□ -1.04
SCN8A-202ENST00000355133 IGLV5-37A0A075B6J1 123 aa8.53□□□□□ -1.04
SCN8A-202ENST00000355133 SPRR4Q96PI1 79 aa8.52□□□□□ -1.05
SCN8A-202ENST00000355133 ZNF575Q86XF7 245 aa8.52□□□□□ -1.05
SCN8A-202ENST00000355133 LINC00336Q6ZUF6 198 aa8.5□□□□□ -1.05
SCN8A-202ENST00000355133 KRTAP1-1Q07627 177 aa8.5□□□□□ -1.05
SCN8A-202ENST00000355133 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
SCN8A-202ENST00000355133 MIR22HGQ0VDD5 57 aa8.49□□□□□ -1.05
SCN8A-202ENST00000355133 HECTD1Q9ULT8 2610 aa8.49□□□□□ -1.05
SCN8A-202ENST00000355133 CYP4F30PQ9H0H9 118 aa8.48□□□□□ -1.05
SCN8A-202ENST00000355133 A0A1W2PNM2 257 aa8.47□□□□□ -1.05
SCN8A-202ENST00000355133 FLNBO75369 2602 aaKnown RBP8.47□□□□□ -1.05
SCN8A-202ENST00000355133 RBM12B-AS1Q9P1G2 102 aa8.46□□□□□ -1.05
SCN8A-202ENST00000355133 LINC01554Q52M75 96 aa8.46□□□□□ -1.06
SCN8A-202ENST00000355133 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
SCN8A-202ENST00000355133 Q8N1X5 172 aa8.46□□□□□ -1.06
SCN8A-202ENST00000355133 USP24Q9UPU5 2620 aa8.45□□□□□ -1.06
SCN8A-202ENST00000355133 MGAM2Q2M2H8 2515 aa8.45□□□□□ -1.06
SCN8A-202ENST00000355133 KLKP1Q107X0 134 aa8.45□□□□□ -1.06
SCN8A-202ENST00000355133 IGLV5-48A0A075B6I7 105 aa8.42□□□□□ -1.06
SCN8A-202ENST00000355133 TNP2Q05952 138 aa8.42□□□□□ -1.06
SCN8A-202ENST00000355133 A0A0D9SG42 100 aa8.42□□□□□ -1.06
SCN8A-202ENST00000355133 H7BZZ5 65 aa8.39□□□□□ -1.07
SCN8A-202ENST00000355133 FAM104AQ969W3 186 aa8.38□□□□□ -1.07
SCN8A-202ENST00000355133 PRRC2CQ9Y520 2896 aaKnown RBP8.36□□□□□ -1.07
SCN8A-202ENST00000355133 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
SCN8A-202ENST00000355133 PRR26Q8N8Z3 221 aa8.32□□□□□ -1.08
SCN8A-202ENST00000355133 Q6ZSA8 131 aa8.31□□□□□ -1.08
SCN8A-202ENST00000355133 DNAH12Q6ZR08 3092 aa8.31□□□□□ -1.08
SCN8A-202ENST00000355133 BPTFQ12830 3046 aa8.3□□□□□ -1.08
SCN8A-202ENST00000355133 IGLV7-46A0A075B6I9 117 aa8.29□□□□□ -1.08
SCN8A-202ENST00000355133 SPANXA2-OT1Q8N9U9 137 aa8.28□□□□□ -1.08
SCN8A-202ENST00000355133 CDC42SE1Q9NRR8 79 aa8.28□□□□□ -1.08
SCN8A-202ENST00000355133 CD164Q04900 197 aa8.25□□□□□ -1.09
SCN8A-202ENST00000355133 FLNAP21333 2647 aaKnown RBP8.22□□□□□ -1.09
SCN8A-202ENST00000355133 ATRQ13535 2644 aa8.22□□□□□ -1.09
SCN8A-202ENST00000355133 CR1P17927 2039 aa8.21□□□□□ -1.09
SCN8A-202ENST00000355133 M0R2T5 61 aa8.21□□□□□ -1.1
SCN8A-202ENST00000355133 OCR1Q9BZK8 76 aa8.21□□□□□ -1.1
SCN8A-202ENST00000355133 ITPR3Q14573 2671 aa8.18□□□□□ -1.1
SCN8A-202ENST00000355133 KTN1-AS1Q86SY8 53 aa8.18□□□□□ -1.1
SCN8A-202ENST00000355133 HRES1P13985 223 aa8.18□□□□□ -1.1
SCN8A-202ENST00000355133 MAST4O15021 2626 aa8.17□□□□□ -1.1
SCN8A-202ENST00000355133 PLAC8Q9NZF1 115 aa8.16□□□□□ -1.1
SCN8A-202ENST00000355133 UTRNP46939 3433 aa8.16□□□□□ -1.1
SCN8A-202ENST00000355133 CAMK2N1Q7Z7J9 78 aa8.16□□□□□ -1.1
SCN8A-202ENST00000355133 FAM229BQ4G0N7 80 aa8.15□□□□□ -1.1
SCN8A-202ENST00000355133 LCA10Q71F78 164 aa8.15□□□□□ -1.11
SCN8A-202ENST00000355133 WIPF1O43516 503 aa8.14□□□□□ -1.11
SCN8A-202ENST00000355133 Q8NDZ9 215 aa8.14□□□□□ -1.11
SCN8A-202ENST00000355133 A0A1B0GU33 70 aa8.12□□□□□ -1.11
SCN8A-202ENST00000355133 HELZ2Q9BYK8 2649 aaKnown RBP8.12□□□□□ -1.11
SCN8A-202ENST00000355133 ZCCHC13Q8WW36 166 aaKnown RBP8.11□□□□□ -1.11
SCN8A-202ENST00000355133 MMP24-AS1A0A0U1RRL7 71 aa8.11□□□□□ -1.11
SCN8A-202ENST00000355133 CEP350Q5VT06 3117 aa8.1□□□□□ -1.11
SCN8A-202ENST00000355133 Q8N9P0 234 aaPredicted RBP8.1□□□□□ -1.11
SCN8A-202ENST00000355133 Q1T7F1 81 aa8.07□□□□□ -1.12
SCN8A-202ENST00000355133 SPRR1AP35321 89 aa8.06□□□□□ -1.12
SCN8A-202ENST00000355133 S4R3F8 94 aa8.06□□□□□ -1.12
SCN8A-202ENST00000355133 KRTAP1-5Q9BYS1 174 aa8.05□□□□□ -1.12
SCN8A-202ENST00000355133 C5orf42Q9H799 3197 aa8.05□□□□□ -1.12
SCN8A-202ENST00000355133 CSAG1Q6PB30 78 aa8.04□□□□□ -1.12
SCN8A-202ENST00000355133 LUZP6Q538Z0 58 aa8.04□□□□□ -1.12
SCN8A-202ENST00000355133 CFAP46Q8IYW2 2715 aa8.03□□□□□ -1.12
SCN8A-202ENST00000355133 Q5W150 140 aa8.01□□□□□ -1.13
SCN8A-202ENST00000355133 Q5VSD8 79 aa8.01□□□□□ -1.13
SCN8A-202ENST00000355133 SPINK7P58062 85 aa7.99□□□□□ -1.13
SCN8A-202ENST00000355133 LINC00472Q9H8W2 130 aa7.98□□□□□ -1.13
SCN8A-202ENST00000355133 CHD7Q9P2D1 2997 aa7.98□□□□□ -1.13
SCN8A-202ENST00000355133 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
SCN8A-202ENST00000355133 Q75L30 129 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms