RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 Q6ZRU5 148 aa6.33□□□□□ -1.4
SMG6-202ENST00000354901 C10orf25Q5T742 122 aa6.32□□□□□ -1.4
SMG6-202ENST00000354901 LINC00612Q8N6U2 182 aa6.32□□□□□ -1.4
SMG6-202ENST00000354901 KLK12Q9UKR0 248 aa6.32□□□□□ -1.4
SMG6-202ENST00000354901 Q6ZRP5 223 aa6.32□□□□□ -1.4
SMG6-202ENST00000354901 PKD1L1Q8TDX9 2849 aa6.32□□□□□ -1.4
SMG6-202ENST00000354901 CXCL6P80162 114 aa6.31□□□□□ -1.4
SMG6-202ENST00000354901 UNQ6190/PRO20217Q6UXQ8 127 aa6.31□□□□□ -1.4
SMG6-202ENST00000354901 Q8NDZ9 215 aa6.31□□□□□ -1.4
SMG6-202ENST00000354901 C1orf64Q8NEQ6 169 aa6.31□□□□□ -1.4
SMG6-202ENST00000354901 DEFB105AQ8NG35 78 aa6.31□□□□□ -1.4
SMG6-202ENST00000354901 C9orf66Q5T8R8 295 aa6.31□□□□□ -1.4
SMG6-202ENST00000354901 XAGE1AQ9HD64 81 aa6.31□□□□□ -1.4
SMG6-202ENST00000354901 KIAA0087Q14695 138 aa6.31□□□□□ -1.4
SMG6-202ENST00000354901 LYRM9A8MSI8 78 aa6.3□□□□□ -1.4
SMG6-202ENST00000354901 BCE1O60756 84 aa6.3□□□□□ -1.4
SMG6-202ENST00000354901 TRAV22A0A0B4J277 110 aa6.3□□□□□ -1.4
SMG6-202ENST00000354901 Q6ZTC4 211 aa6.3□□□□□ -1.4
SMG6-202ENST00000354901 SMIM29Q86T20 159 aa6.3□□□□□ -1.4
SMG6-202ENST00000354901 UBE2BP63146 152 aa6.29□□□□□ -1.4
SMG6-202ENST00000354901 SPAG11BQ08648 103 aa6.29□□□□□ -1.4
SMG6-202ENST00000354901 LINC00167Q96N53 147 aa6.29□□□□□ -1.4
SMG6-202ENST00000354901 KTN1-AS1Q86SY8 53 aa6.29□□□□□ -1.4
SMG6-202ENST00000354901 LOC110117498A0A087WWA1 95 aa6.28□□□□□ -1.4
SMG6-202ENST00000354901 A6NED7 52 aa6.28□□□□□ -1.4
SMG6-202ENST00000354901 STAB1Q9NY15 2570 aa6.28□□□□□ -1.4
SMG6-202ENST00000354901 NOTCH1P46531 2555 aa6.27□□□□□ -1.41
SMG6-202ENST00000354901 hDV103S1A0JD37 113 aa6.27□□□□□ -1.41
SMG6-202ENST00000354901 CYSRT1A8MQ03 144 aa6.27□□□□□ -1.41
SMG6-202ENST00000354901 SPART-AS1P0CW21 52 aa6.27□□□□□ -1.41
SMG6-202ENST00000354901 Q8NAQ8 132 aa6.27□□□□□ -1.41
SMG6-202ENST00000354901 IGHV4-30-4P0DP06 118 aa6.26□□□□□ -1.41
SMG6-202ENST00000354901 IGKV4-1P06312 121 aa6.26□□□□□ -1.41
SMG6-202ENST00000354901 DEFB116Q30KQ4 102 aa6.26□□□□□ -1.41
SMG6-202ENST00000354901 DIRC1Q969H9 104 aa6.26□□□□□ -1.41
SMG6-202ENST00000354901 HIGD2BQ4VC39 106 aa6.26□□□□□ -1.41
SMG6-202ENST00000354901 OCR1Q9BZK8 76 aa6.25□□□□□ -1.41
SMG6-202ENST00000354901 TENM3Q9P273 2699 aa6.24□□□□□ -1.41
SMG6-202ENST00000354901 MAST4O15021 2626 aa6.24□□□□□ -1.41
SMG6-202ENST00000354901 M0R378 163 aa6.24□□□□□ -1.41
SMG6-202ENST00000354901 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
SMG6-202ENST00000354901 PDE6GP18545 87 aa6.24□□□□□ -1.41
SMG6-202ENST00000354901 HCG22E2RYF7 251 aa6.23□□□□□ -1.41
SMG6-202ENST00000354901 COX17Q14061 63 aa6.23□□□□□ -1.41
SMG6-202ENST00000354901 LELP1Q5T871 98 aa6.23□□□□□ -1.41
SMG6-202ENST00000354901 ZNF73O43830 326 aaPredicted RBP6.23□□□□□ -1.41
SMG6-202ENST00000354901 SYCNQ0VAF6 134 aa6.23□□□□□ -1.41
SMG6-202ENST00000354901 WFDC10BQ8IUB3 73 aa6.23□□□□□ -1.41
SMG6-202ENST00000354901 MDFIQ99750 246 aa6.23□□□□□ -1.41
SMG6-202ENST00000354901 COX7BP24311 80 aa6.22□□□□□ -1.41
SMG6-202ENST00000354901 UBE2AP49459 152 aa6.22□□□□□ -1.41
SMG6-202ENST00000354901 NBEAL1Q6ZS30 2694 aa6.21□□□□□ -1.42
SMG6-202ENST00000354901 C6orf48Q9UBA6 75 aa6.2□□□□□ -1.42
SMG6-202ENST00000354901 NDUFS5O43920 106 aa6.2□□□□□ -1.42
SMG6-202ENST00000354901 ST20-AS1Q8NBB2 130 aa6.2□□□□□ -1.42
SMG6-202ENST00000354901 CAMK2N2Q96S95 79 aa6.2□□□□□ -1.42
SMG6-202ENST00000354901 KPRPQ5T749 579 aaPredicted RBP6.19□□□□□ -1.42
SMG6-202ENST00000354901 Q1T7F1 81 aa6.19□□□□□ -1.42
SMG6-202ENST00000354901 WFDC13Q8IUB5 93 aa6.19□□□□□ -1.42
SMG6-202ENST00000354901 FBN1P35555 2871 aaKnown RBP6.18□□□□□ -1.42
SMG6-202ENST00000354901 ERC2-IT1O76042 136 aa6.18□□□□□ -1.42
SMG6-202ENST00000354901 LINC00588Q9Y4M8 146 aa6.18□□□□□ -1.42
SMG6-202ENST00000354901 A0A0J9YWU9 116 aa6.18□□□□□ -1.42
SMG6-202ENST00000354901 PRR34Q9NV39 138 aa6.18□□□□□ -1.42
SMG6-202ENST00000354901 PSCAO43653 123 aa6.18□□□□□ -1.42
SMG6-202ENST00000354901 C8orf87E5RJ46 101 aa6.17□□□□□ -1.42
SMG6-202ENST00000354901 C16orf90A8MZG2 172 aa6.16□□□□□ -1.42
SMG6-202ENST00000354901 IGKV2D-24A0A075B6R9 120 aa6.16□□□□□ -1.42
SMG6-202ENST00000354901 Q5VV11 94 aa6.16□□□□□ -1.42
SMG6-202ENST00000354901 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.16□□□□□ -1.42
SMG6-202ENST00000354901 IGLV6-57P01721 117 aa6.16□□□□□ -1.42
SMG6-202ENST00000354901 MGAM2Q2M2H8 2515 aa6.15□□□□□ -1.42
SMG6-202ENST00000354901 COL6A5A8TX70 2615 aa6.15□□□□□ -1.42
SMG6-202ENST00000354901 LINC00208Q96KT6 92 aa6.15□□□□□ -1.43
SMG6-202ENST00000354901 KRTAP24-1Q3LI83 254 aa6.15□□□□□ -1.43
SMG6-202ENST00000354901 BAHCC1Q9P281 2608 aa6.14□□□□□ -1.43
SMG6-202ENST00000354901 ETDCA0A1B0GVM5 59 aa6.14□□□□□ -1.43
SMG6-202ENST00000354901 KRTAP10-11P60412 298 aa6.14□□□□□ -1.43
SMG6-202ENST00000354901 SERTAD4-AS1Q5TG53 156 aa6.14□□□□□ -1.43
SMG6-202ENST00000354901 NKAPP1Q8N9T2 125 aa6.13□□□□□ -1.43
SMG6-202ENST00000354901 A0A0G2JQZ4 141 aa6.13□□□□□ -1.43
SMG6-202ENST00000354901 A0A1W2PNN7 141 aa6.13□□□□□ -1.43
SMG6-202ENST00000354901 K7EQZ3 153 aa6.13□□□□□ -1.43
SMG6-202ENST00000354901 EGFEM1PQ0D2K5 195 aa6.13□□□□□ -1.43
SMG6-202ENST00000354901 ATP11AUNQ6ZP68 121 aa6.12□□□□□ -1.43
SMG6-202ENST00000354901 B9D2Q9BPU9 175 aa6.12□□□□□ -1.43
SMG6-202ENST00000354901 C7orf65Q6ZTY9 151 aa6.11□□□□□ -1.43
SMG6-202ENST00000354901 C15orf56Q8N910 161 aa6.11□□□□□ -1.43
SMG6-202ENST00000354901 VPREB1P12018 145 aa6.11□□□□□ -1.43
SMG6-202ENST00000354901 DEFB131BA0A096LNP1 70 aa6.11□□□□□ -1.43
SMG6-202ENST00000354901 GVQW2A0A096LPI5 108 aaPredicted RBP6.1□□□□□ -1.43
SMG6-202ENST00000354901 LCA10Q71F78 164 aa6.1□□□□□ -1.43
SMG6-202ENST00000354901 MP68P56378 58 aa6.1□□□□□ -1.43
SMG6-202ENST00000354901 ELOF1P60002 83 aaKnown RBP6.09□□□□□ -1.43
SMG6-202ENST00000354901 PRAC1Q96KF2 57 aa6.09□□□□□ -1.43
SMG6-202ENST00000354901 KRTAP26-1Q6PEX3 210 aa6.09□□□□□ -1.44
SMG6-202ENST00000354901 LIMD2Q9BT23 127 aa6.08□□□□□ -1.44
SMG6-202ENST00000354901 RPL37AP8A6NKH3 93 aa6.07□□□□□ -1.44
SMG6-202ENST00000354901 H3BQ85 93 aa6.06□□□□□ -1.44
SMG6-202ENST00000354901 C1orf137Q5JT78 98 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms