RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 CHTF8P0CG12 524 aa8.32□□□□□ -1.08
PCDHB11-201ENST00000354757 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
PCDHB11-201ENST00000354757 C7orf33Q8WU49 177 aa8.32□□□□□ -1.08
PCDHB11-201ENST00000354757 C4orf48Q5BLP8 95 aa8.32□□□□□ -1.08
PCDHB11-201ENST00000354757 MRPL55Q7Z7F7 128 aaKnown RBP8.31□□□□□ -1.08
PCDHB11-201ENST00000354757 BPY2O14599 106 aa8.31□□□□□ -1.08
PCDHB11-201ENST00000354757 C22orf24Q9Y442 160 aa8.31□□□□□ -1.08
PCDHB11-201ENST00000354757 DNAH10OSP0CZ25 163 aa8.3□□□□□ -1.08
PCDHB11-201ENST00000354757 LINC00612Q8N6U2 182 aa8.3□□□□□ -1.08
PCDHB11-201ENST00000354757 MUC7Q8TAX7 377 aa8.3□□□□□ -1.08
PCDHB11-201ENST00000354757 ATP5EP2Q5VTU8 51 aa8.29□□□□□ -1.08
PCDHB11-201ENST00000354757 NBDYA0A0U1RRE5 68 aa8.29□□□□□ -1.08
PCDHB11-201ENST00000354757 REG3GQ6UW15 175 aa8.28□□□□□ -1.08
PCDHB11-201ENST00000354757 DHRS4-AS1Q9P1J3 65 aa8.28□□□□□ -1.08
PCDHB11-201ENST00000354757 TM2D3Q9BRN9 247 aa8.28□□□□□ -1.08
PCDHB11-201ENST00000354757 NDUFB1O75438 58 aa8.27□□□□□ -1.09
PCDHB11-201ENST00000354757 OTOGQ6ZRI0 2925 aa8.27□□□□□ -1.09
PCDHB11-201ENST00000354757 LINC00167Q96N53 147 aa8.27□□□□□ -1.09
PCDHB11-201ENST00000354757 PDE6GP18545 87 aa8.26□□□□□ -1.09
PCDHB11-201ENST00000354757 C1orf137Q5JT78 98 aa8.26□□□□□ -1.09
PCDHB11-201ENST00000354757 CASC10Q5T4H9 136 aa8.26□□□□□ -1.09
PCDHB11-201ENST00000354757 Q6ZRP5 223 aa8.26□□□□□ -1.09
PCDHB11-201ENST00000354757 LINC01561Q8N1V8 128 aa8.26□□□□□ -1.09
PCDHB11-201ENST00000354757 LINC00474Q9P2X8 69 aa8.26□□□□□ -1.09
PCDHB11-201ENST00000354757 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.26□□□□□ -1.09
PCDHB11-201ENST00000354757 FAM168BA1KXE4 195 aa8.25□□□□□ -1.09
PCDHB11-201ENST00000354757 H3BQ85 93 aa8.25□□□□□ -1.09
PCDHB11-201ENST00000354757 RPS28P62857 69 aaKnown RBP8.25□□□□□ -1.09
PCDHB11-201ENST00000354757 C9orf129Q5T035 196 aaKnown RBP8.24□□□□□ -1.09
PCDHB11-201ENST00000354757 LINC00575Q6W349 94 aa8.24□□□□□ -1.09
PCDHB11-201ENST00000354757 PHF5AQ7RTV0 110 aaKnown RBP8.23□□□□□ -1.09
PCDHB11-201ENST00000354757 PRR34Q9NV39 138 aa8.22□□□□□ -1.09
PCDHB11-201ENST00000354757 FBN1P35555 2871 aaKnown RBP8.22□□□□□ -1.09
PCDHB11-201ENST00000354757 KIAA0087Q14695 138 aa8.22□□□□□ -1.09
PCDHB11-201ENST00000354757 NBPF19A0A087WUL8 3843 aa8.22□□□□□ -1.09
PCDHB11-201ENST00000354757 DEFB116Q30KQ4 102 aa8.22□□□□□ -1.09
PCDHB11-201ENST00000354757 TENM1Q9UKZ4 2725 aa8.22□□□□□ -1.09
PCDHB11-201ENST00000354757 TRAV7A0A075B6U4 112 aa8.21□□□□□ -1.09
PCDHB11-201ENST00000354757 SERP1Q9Y6X1 66 aa8.21□□□□□ -1.09
PCDHB11-201ENST00000354757 SMIM26A0A096LP01 95 aa8.21□□□□□ -1.1
PCDHB11-201ENST00000354757 WFDC13Q8IUB5 93 aa8.21□□□□□ -1.1
PCDHB11-201ENST00000354757 WWC2-AS2Q96NR7 200 aa8.2□□□□□ -1.1
PCDHB11-201ENST00000354757 C15orf56Q8N910 161 aa8.2□□□□□ -1.1
PCDHB11-201ENST00000354757 PRR4Q16378 134 aa8.19□□□□□ -1.1
PCDHB11-201ENST00000354757 CIRBP-AS1Q8TBR5 109 aa8.19□□□□□ -1.1
PCDHB11-201ENST00000354757 SERTAD4-AS1Q5TG53 156 aa8.18□□□□□ -1.1
PCDHB11-201ENST00000354757 GVQW2A0A096LPI5 108 aaPredicted RBP8.18□□□□□ -1.1
PCDHB11-201ENST00000354757 FAM104AQ969W3 186 aa8.18□□□□□ -1.1
PCDHB11-201ENST00000354757 Q6ZVQ6 151 aa8.17□□□□□ -1.1
PCDHB11-201ENST00000354757 Q9BRP9 147 aa8.17□□□□□ -1.1
PCDHB11-201ENST00000354757 LINC01547P58512 204 aaPredicted RBP8.17□□□□□ -1.1
PCDHB11-201ENST00000354757 CYSTM1Q9H1C7 97 aa8.17□□□□□ -1.1
PCDHB11-201ENST00000354757 A0A087WSZ3 146 aa8.16□□□□□ -1.1
PCDHB11-201ENST00000354757 RTL8CO15255 209 aa8.16□□□□□ -1.1
PCDHB11-201ENST00000354757 Q8N9L7 120 aa8.16□□□□□ -1.1
PCDHB11-201ENST00000354757 ST20-AS1Q8NBB2 130 aa8.15□□□□□ -1.1
PCDHB11-201ENST00000354757 V9GYY9 64 aa8.15□□□□□ -1.1
PCDHB11-201ENST00000354757 PRYO14603 147 aa8.15□□□□□ -1.1
PCDHB11-201ENST00000354757 WIPF1O43516 503 aa8.15□□□□□ -1.1
PCDHB11-201ENST00000354757 VPREB1P12018 145 aa8.15□□□□□ -1.11
PCDHB11-201ENST00000354757 C1orf195Q5TG92 126 aa8.15□□□□□ -1.11
PCDHB11-201ENST00000354757 F8WDY8 70 aa8.13□□□□□ -1.11
PCDHB11-201ENST00000354757 PRO0628Q9UI54 55 aa8.13□□□□□ -1.11
PCDHB11-201ENST00000354757 TRBV7-6A0A0J9YX20 115 aa8.13□□□□□ -1.11
PCDHB11-201ENST00000354757 NDUFC1O43677 76 aa8.13□□□□□ -1.11
PCDHB11-201ENST00000354757 FAM19A3Q7Z5A8 133 aa8.12□□□□□ -1.11
PCDHB11-201ENST00000354757 LINC01600Q96MT4 127 aa8.12□□□□□ -1.11
PCDHB11-201ENST00000354757 VWFP04275 2813 aa8.12□□□□□ -1.11
PCDHB11-201ENST00000354757 APLNQ9ULZ1 77 aa8.11□□□□□ -1.11
PCDHB11-201ENST00000354757 ZNF706Q9Y5V0 76 aaPredicted RBP8.11□□□□□ -1.11
PCDHB11-201ENST00000354757 C16orf90A8MZG2 172 aa8.11□□□□□ -1.11
PCDHB11-201ENST00000354757 TMEM254Q8TBM7 123 aa8.11□□□□□ -1.11
PCDHB11-201ENST00000354757 IGKV4-1P06312 121 aa8.1□□□□□ -1.11
PCDHB11-201ENST00000354757 MP68P56378 58 aa8.1□□□□□ -1.11
PCDHB11-201ENST00000354757 LINC00336Q6ZUF6 198 aa8.1□□□□□ -1.11
PCDHB11-201ENST00000354757 FAM30AQ9NZY2 134 aa8.1□□□□□ -1.11
PCDHB11-201ENST00000354757 PDZD2O15018 2839 aa8.1□□□□□ -1.11
PCDHB11-201ENST00000354757 PKD1L1Q8TDX9 2849 aa8.09□□□□□ -1.11
PCDHB11-201ENST00000354757 ELOF1P60002 83 aaKnown RBP8.08□□□□□ -1.12
PCDHB11-201ENST00000354757 EPM2AB3EWF7 344 aa8.07□□□□□ -1.12
PCDHB11-201ENST00000354757 Q6ZRX8 168 aa8.07□□□□□ -1.12
PCDHB11-201ENST00000354757 TENM3Q9P273 2699 aa8.07□□□□□ -1.12
PCDHB11-201ENST00000354757 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
PCDHB11-201ENST00000354757 A0A0G2JQZ4 141 aa8.06□□□□□ -1.12
PCDHB11-201ENST00000354757 A0A1W2PNN7 141 aa8.06□□□□□ -1.12
PCDHB11-201ENST00000354757 IGLV6-57P01721 117 aa8.06□□□□□ -1.12
PCDHB11-201ENST00000354757 ATP5EP56381 51 aaPredicted RBP8.06□□□□□ -1.12
PCDHB11-201ENST00000354757 MOBPQ13875 183 aa8.05□□□□□ -1.12
PCDHB11-201ENST00000354757 PSPHP1O15172 72 aa8.05□□□□□ -1.12
PCDHB11-201ENST00000354757 Q6ZQT0 140 aa8.05□□□□□ -1.12
PCDHB11-201ENST00000354757 A0A087WTM6 91 aa8.04□□□□□ -1.12
PCDHB11-201ENST00000354757 IGHV6-1A0A0B4J1U7 121 aa8.02□□□□□ -1.13
PCDHB11-201ENST00000354757 H7BZZ5 65 aa8.02□□□□□ -1.13
PCDHB11-201ENST00000354757 SMR3BP02814 79 aaPredicted RBP8.01□□□□□ -1.13
PCDHB11-201ENST00000354757 C9orf163Q8N9P6 203 aa8.01□□□□□ -1.13
PCDHB11-201ENST00000354757 IGLV1-50A0A075B6I6 118 aa8□□□□□ -1.13
PCDHB11-201ENST00000354757 ANAPC11Q9NYG5 84 aa8□□□□□ -1.13
PCDHB11-201ENST00000354757 OXTP01178 125 aa8□□□□□ -1.13
PCDHB11-201ENST00000354757 CXCL6P80162 114 aa8□□□□□ -1.13
PCDHB11-201ENST00000354757 LINC00476Q8WZB0 136 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms