RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 RPL36AP83881 106 aaKnown RBP7.4□□□□□ -1.22
SND1-201ENST00000354725 RPL36ALQ969Q0 106 aaKnown RBP7.4□□□□□ -1.22
SND1-201ENST00000354725 C16orf90A8MZG2 172 aa7.4□□□□□ -1.23
SND1-201ENST00000354725 Q75L30 129 aa7.39□□□□□ -1.23
SND1-201ENST00000354725 A6NN06 94 aa7.39□□□□□ -1.23
SND1-201ENST00000354725 C1orf64Q8NEQ6 169 aa7.38□□□□□ -1.23
SND1-201ENST00000354725 ADM2Q7Z4H4 148 aa7.38□□□□□ -1.23
SND1-201ENST00000354725 IGHV6-1A0A0B4J1U7 121 aa7.37□□□□□ -1.23
SND1-201ENST00000354725 HTN1P15515 57 aa7.37□□□□□ -1.23
SND1-201ENST00000354725 CXCL6P80162 114 aa7.37□□□□□ -1.23
SND1-201ENST00000354725 ATP11AUNQ6ZP68 121 aa7.37□□□□□ -1.23
SND1-201ENST00000354725 IGKV2-28A0A075B6P5 120 aa7.37□□□□□ -1.23
SND1-201ENST00000354725 A6NED7 52 aa7.37□□□□□ -1.23
SND1-201ENST00000354725 IGKV2D-28P01615 120 aa7.37□□□□□ -1.23
SND1-201ENST00000354725 HUWE1Q7Z6Z7 4374 aaKnown RBP7.36□□□□□ -1.23
SND1-201ENST00000354725 Q5VV11 94 aa7.36□□□□□ -1.23
SND1-201ENST00000354725 NBEAL1Q6ZS30 2694 aa7.36□□□□□ -1.23
SND1-201ENST00000354725 BPY2O14599 106 aa7.36□□□□□ -1.23
SND1-201ENST00000354725 CSNK1G2-AS1Q8NCQ2 148 aa7.35□□□□□ -1.23
SND1-201ENST00000354725 FBN3Q75N90 2809 aa7.35□□□□□ -1.23
SND1-201ENST00000354725 KIAA0087Q14695 138 aa7.35□□□□□ -1.23
SND1-201ENST00000354725 COL7A1Q02388 2944 aa7.35□□□□□ -1.23
SND1-201ENST00000354725 SCXQ7RTU7 201 aa7.34□□□□□ -1.23
SND1-201ENST00000354725 LINC00167Q96N53 147 aa7.34□□□□□ -1.23
SND1-201ENST00000354725 PRR3P79522 188 aaKnown RBP7.33□□□□□ -1.24
SND1-201ENST00000354725 TNP2Q05952 138 aa7.33□□□□□ -1.24
SND1-201ENST00000354725 KPRPQ5T749 579 aaPredicted RBP7.33□□□□□ -1.24
SND1-201ENST00000354725 HIGD2AQ9BW72 106 aa7.33□□□□□ -1.24
SND1-201ENST00000354725 DYNC2H1Q8NCM8 4307 aaKnown RBP7.33□□□□□ -1.24
SND1-201ENST00000354725 TRBV6-4A0A1B0GX49 114 aa7.33□□□□□ -1.24
SND1-201ENST00000354725 CHCHD10Q8WYQ3 142 aaPredicted RBP7.33□□□□□ -1.24
SND1-201ENST00000354725 Q6ZQT0 140 aa7.32□□□□□ -1.24
SND1-201ENST00000354725 IGHV3OR16-9A0A0B4J2B5 98 aa7.32□□□□□ -1.24
SND1-201ENST00000354725 TRGV1A0A0A0MS02 117 aa7.32□□□□□ -1.24
SND1-201ENST00000354725 PSCAO43653 123 aa7.32□□□□□ -1.24
SND1-201ENST00000354725 HIGD2BQ4VC39 106 aa7.31□□□□□ -1.24
SND1-201ENST00000354725 OCR1Q9BZK8 76 aa7.31□□□□□ -1.24
SND1-201ENST00000354725 C16orf74Q96GX8 76 aa7.31□□□□□ -1.24
SND1-201ENST00000354725 M0R2N4 97 aa7.3□□□□□ -1.24
SND1-201ENST00000354725 LINC00612Q8N6U2 182 aa7.3□□□□□ -1.24
SND1-201ENST00000354725 EGFEM1PQ0D2K5 195 aa7.29□□□□□ -1.24
SND1-201ENST00000354725 COX7B2Q8TF08 81 aa7.29□□□□□ -1.24
SND1-201ENST00000354725 PRR4Q16378 134 aa7.28□□□□□ -1.24
SND1-201ENST00000354725 LOC110117498A0A087WWA1 95 aa7.28□□□□□ -1.24
SND1-201ENST00000354725 TRBV6-8A0A0A6YYG3 113 aa7.28□□□□□ -1.24
SND1-201ENST00000354725 Q8N814 137 aa7.27□□□□□ -1.25
SND1-201ENST00000354725 CSMD3Q7Z407 3707 aa7.27□□□□□ -1.25
SND1-201ENST00000354725 IGLV4-60A0A075B6I1 120 aa7.27□□□□□ -1.25
SND1-201ENST00000354725 IGLV1-51P01701 117 aa7.27□□□□□ -1.25
SND1-201ENST00000354725 CMC4P56277 68 aaPredicted RBP7.27□□□□□ -1.25
SND1-201ENST00000354725 NOP10Q9NPE3 64 aaKnown RBP7.27□□□□□ -1.25
SND1-201ENST00000354725 KRTAP10-11P60412 298 aa7.26□□□□□ -1.25
SND1-201ENST00000354725 CCL18P55774 89 aa7.26□□□□□ -1.25
SND1-201ENST00000354725 PRR15LQ9BU68 103 aa7.25□□□□□ -1.25
SND1-201ENST00000354725 LYSTQ99698 3801 aa7.25□□□□□ -1.25
SND1-201ENST00000354725 C1orf134Q5TEV5 83 aa7.24□□□□□ -1.25
SND1-201ENST00000354725 A0A1B0GUV1 79 aa7.24□□□□□ -1.25
SND1-201ENST00000354725 PLA2G1BP04054 148 aaKnown RBP7.24□□□□□ -1.25
SND1-201ENST00000354725 CYP4F30PQ9H0H9 118 aa7.24□□□□□ -1.25
SND1-201ENST00000354725 LINC00959A0A1B0GUT2 108 aa7.22□□□□□ -1.25
SND1-201ENST00000354725 C9orf116Q5BN46 136 aaPredicted RBP7.21□□□□□ -1.25
SND1-201ENST00000354725 Q8IZM0 81 aa7.21□□□□□ -1.25
SND1-201ENST00000354725 LIMD2Q9BT23 127 aa7.21□□□□□ -1.26
SND1-201ENST00000354725 WFDC10AQ9H1F0 79 aa7.21□□□□□ -1.26
SND1-201ENST00000354725 LINC00476Q8WZB0 136 aa7.21□□□□□ -1.26
SND1-201ENST00000354725 MGAM2Q2M2H8 2515 aa7.2□□□□□ -1.26
SND1-201ENST00000354725 LINC00158P58513 81 aa7.2□□□□□ -1.26
SND1-201ENST00000354725 C9orf66Q5T8R8 295 aa7.2□□□□□ -1.26
SND1-201ENST00000354725 IGHV4-28A0A0C4DH34 117 aa7.2□□□□□ -1.26
SND1-201ENST00000354725 LINC00528Q8N1L1 170 aa7.2□□□□□ -1.26
SND1-201ENST00000354725 PDE6GP18545 87 aa7.19□□□□□ -1.26
SND1-201ENST00000354725 Q8N9P0 234 aaPredicted RBP7.19□□□□□ -1.26
SND1-201ENST00000354725 WNK1Q9H4A3 2382 aa7.19□□□□□ -1.26
SND1-201ENST00000354725 NOTCH1P46531 2555 aa7.18□□□□□ -1.26
SND1-201ENST00000354725 TRGV2A0A075B6R0 118 aa7.18□□□□□ -1.26
SND1-201ENST00000354725 IGKV4-1P06312 121 aa7.18□□□□□ -1.26
SND1-201ENST00000354725 Q8N9L7 120 aa7.18□□□□□ -1.26
SND1-201ENST00000354725 CDC42SE1Q9NRR8 79 aa7.18□□□□□ -1.26
SND1-201ENST00000354725 MOBPQ13875 183 aa7.18□□□□□ -1.26
SND1-201ENST00000354725 LCE6AA0A183 80 aa7.17□□□□□ -1.26
SND1-201ENST00000354725 ZCCHC13Q8WW36 166 aaKnown RBP7.17□□□□□ -1.26
SND1-201ENST00000354725 COX17Q14061 63 aa7.17□□□□□ -1.26
SND1-201ENST00000354725 TRGV4A0A0C4DH28 118 aa7.17□□□□□ -1.26
SND1-201ENST00000354725 NOTCH3Q9UM47 2321 aa7.16□□□□□ -1.26
SND1-201ENST00000354725 STARD9Q9P2P6 4700 aa7.16□□□□□ -1.26
SND1-201ENST00000354725 KRTAP16-1A8MUX0 517 aa7.15□□□□□ -1.27
SND1-201ENST00000354725 C3orf84H3BNL1 204 aa7.15□□□□□ -1.27
SND1-201ENST00000354725 K7EIL1 84 aa7.15□□□□□ -1.27
SND1-201ENST00000354725 MUC7Q8TAX7 377 aa7.15□□□□□ -1.27
SND1-201ENST00000354725 DNAH1Q9P2D7 4330 aa7.14□□□□□ -1.27
SND1-201ENST00000354725 Q8NDZ9 215 aa7.14□□□□□ -1.27
SND1-201ENST00000354725 TOMM7Q9P0U1 55 aa7.13□□□□□ -1.27
SND1-201ENST00000354725 IGLV9-49A0A0B4J1Y8 123 aa7.13□□□□□ -1.27
SND1-201ENST00000354725 PLECQ15149 4684 aaKnown RBP7.11□□□□□ -1.27
SND1-201ENST00000354725 LOC101927531A0A1B0GV80 90 aa7.11□□□□□ -1.27
SND1-201ENST00000354725 LINC00575Q6W349 94 aa7.1□□□□□ -1.27
SND1-201ENST00000354725 PRO0255Q9UI72 69 aa7.1□□□□□ -1.27
SND1-201ENST00000354725 TENM3Q9P273 2699 aa7.1□□□□□ -1.27
SND1-201ENST00000354725 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
SND1-201ENST00000354725 SMIM29Q86T20 159 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms