RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 RMI2Q96E14 147 aa7.28□□□□□ -1.24
RTN3-204ENST00000354497 IGKV2D-24A0A075B6R9 120 aa7.27□□□□□ -1.24
RTN3-204ENST00000354497 KRTAP9-6A0A140TA67 174 aa7.27□□□□□ -1.24
RTN3-204ENST00000354497 COX7A2LO14548 114 aa7.27□□□□□ -1.24
RTN3-204ENST00000354497 XCL1P47992 114 aa7.27□□□□□ -1.24
RTN3-204ENST00000354497 SUMO2P61956 95 aaKnown RBP7.27□□□□□ -1.24
RTN3-204ENST00000354497 ZNF876PQ49A33 203 aa7.27□□□□□ -1.24
RTN3-204ENST00000354497 OBSCN-AS1Q96MR7 158 aa7.27□□□□□ -1.24
RTN3-204ENST00000354497 KRTAP4-12Q9BQ66 201 aa7.27□□□□□ -1.24
RTN3-204ENST00000354497 TNXBP22105 4242 aa7.27□□□□□ -1.24
RTN3-204ENST00000354497 GNRH2O43555 120 aa7.27□□□□□ -1.25
RTN3-204ENST00000354497 TRAV7A0A075B6U4 112 aa7.26□□□□□ -1.25
RTN3-204ENST00000354497 I3L3M4 83 aa7.26□□□□□ -1.25
RTN3-204ENST00000354497 ZNF80P51504 273 aaPredicted RBP7.26□□□□□ -1.25
RTN3-204ENST00000354497 TSPEAR-AS2P59090 65 aa7.25□□□□□ -1.25
RTN3-204ENST00000354497 LITAFQ99732 161 aa7.25□□□□□ -1.25
RTN3-204ENST00000354497 TRBV6-4A0A1B0GX49 114 aa7.24□□□□□ -1.25
RTN3-204ENST00000354497 GAS8-AS1O95177 125 aa7.24□□□□□ -1.25
RTN3-204ENST00000354497 MIAQ16674 131 aa7.24□□□□□ -1.25
RTN3-204ENST00000354497 C14orf178Q8N769 122 aaPredicted RBP7.24□□□□□ -1.25
RTN3-204ENST00000354497 BRK1Q8WUW1 75 aa7.24□□□□□ -1.25
RTN3-204ENST00000354497 A0A0U1RQV1 116 aa7.23□□□□□ -1.25
RTN3-204ENST00000354497 CCKP06307 115 aa7.23□□□□□ -1.25
RTN3-204ENST00000354497 KRTAP19-1Q8IUB9 90 aa7.23□□□□□ -1.25
RTN3-204ENST00000354497 KLK12Q9UKR0 248 aa7.22□□□□□ -1.25
RTN3-204ENST00000354497 TRAV13-2A0A0B4J235 113 aa7.21□□□□□ -1.25
RTN3-204ENST00000354497 C14orf177Q52M58 125 aa7.21□□□□□ -1.25
RTN3-204ENST00000354497 TRAV21A0A0B4J279 112 aa7.2□□□□□ -1.26
RTN3-204ENST00000354497 TSHBP01222 138 aa7.2□□□□□ -1.26
RTN3-204ENST00000354497 PRSS2P07478 247 aa7.2□□□□□ -1.26
RTN3-204ENST00000354497 BAALC-AS2P0C853 105 aa7.2□□□□□ -1.26
RTN3-204ENST00000354497 C22orf24Q9Y442 160 aa7.2□□□□□ -1.26
RTN3-204ENST00000354497 IGHV1-58A0A0C4DH39 117 aa7.19□□□□□ -1.26
RTN3-204ENST00000354497 ERC2-IT1O76042 136 aa7.19□□□□□ -1.26
RTN3-204ENST00000354497 CLEC2BQ92478 149 aa7.19□□□□□ -1.26
RTN3-204ENST00000354497 LENEPQ9Y5L5 61 aa7.19□□□□□ -1.26
RTN3-204ENST00000354497 H7C2G1 150 aa7.18□□□□□ -1.26
RTN3-204ENST00000354497 DNAL4O96015 105 aa7.18□□□□□ -1.26
RTN3-204ENST00000354497 TRBV6-5A0A0K0K1A5 114 aa7.18□□□□□ -1.26
RTN3-204ENST00000354497 PANO1I0J062 215 aa7.17□□□□□ -1.26
RTN3-204ENST00000354497 POLR2KP53803 58 aaKnown RBP7.17□□□□□ -1.26
RTN3-204ENST00000354497 VCYO14598 125 aa7.16□□□□□ -1.26
RTN3-204ENST00000354497 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
RTN3-204ENST00000354497 IGKV3D-20A0A0C4DH25 116 aa7.15□□□□□ -1.27
RTN3-204ENST00000354497 CRPP02741 224 aa7.15□□□□□ -1.27
RTN3-204ENST00000354497 MRPL55Q7Z7F7 128 aaKnown RBP7.15□□□□□ -1.27
RTN3-204ENST00000354497 LCE3BQ5TA77 95 aa7.14□□□□□ -1.27
RTN3-204ENST00000354497 Q9UF83 564 aa7.14□□□□□ -1.27
RTN3-204ENST00000354497 TRBV27A0A0K0K1C4 114 aa7.13□□□□□ -1.27
RTN3-204ENST00000354497 SPANXN1Q5VSR9 72 aa7.13□□□□□ -1.27
RTN3-204ENST00000354497 C9orf163Q8N9P6 203 aa7.13□□□□□ -1.27
RTN3-204ENST00000354497 LINC00846Q9NV44 126 aa7.13□□□□□ -1.27
RTN3-204ENST00000354497 DGAT2L7PQ6IED9 249 aa7.12□□□□□ -1.27
RTN3-204ENST00000354497 C11orf21Q9P2W6 132 aa7.12□□□□□ -1.27
RTN3-204ENST00000354497 H0YGX0 51 aa7.11□□□□□ -1.27
RTN3-204ENST00000354497 RPL28P46779 137 aaKnown RBP7.11□□□□□ -1.27
RTN3-204ENST00000354497 RBM3P98179 157 aaKnown RBP7.11□□□□□ -1.27
RTN3-204ENST00000354497 Q1T7F1 81 aa7.11□□□□□ -1.27
RTN3-204ENST00000354497 ENHOQ6UWT2 76 aa7.11□□□□□ -1.27
RTN3-204ENST00000354497 CHCHD7Q9BUK0 85 aa7.11□□□□□ -1.27
RTN3-204ENST00000354497 S100A4P26447 101 aaKnown RBP7.1□□□□□ -1.27
RTN3-204ENST00000354497 CIRBPQ14011 172 aaKnown RBP7.1□□□□□ -1.27
RTN3-204ENST00000354497 IGKV3D-7A0A0C4DH55 119 aa7.1□□□□□ -1.27
RTN3-204ENST00000354497 ANGP03950 147 aaKnown RBP7.1□□□□□ -1.27
RTN3-204ENST00000354497 RNASE3P12724 160 aaKnown RBP7.1□□□□□ -1.27
RTN3-204ENST00000354497 ADAMTSL4-AS1Q5T5F5 129 aa7.1□□□□□ -1.27
RTN3-204ENST00000354497 FAM74A4Q5TZK3 123 aa7.1□□□□□ -1.27
RTN3-204ENST00000354497 C7orf33Q8WU49 177 aa7.1□□□□□ -1.27
RTN3-204ENST00000354497 NDUFA12Q9UI09 145 aa7.1□□□□□ -1.27
RTN3-204ENST00000354497 KIF25-AS1Q9Y6Z4 181 aa7.1□□□□□ -1.27
RTN3-204ENST00000354497 A0A087WYN8 130 aa7.09□□□□□ -1.28
RTN3-204ENST00000354497 JMJD7-PLA2G4BH0Y9G9 81 aa7.09□□□□□ -1.28
RTN3-204ENST00000354497 CHTF8P0CG12 524 aa7.09□□□□□ -1.28
RTN3-204ENST00000354497 CLPSL2Q6UWE3 100 aa7.09□□□□□ -1.28
RTN3-204ENST00000354497 CD164L2Q6UWJ8 174 aa7.09□□□□□ -1.28
RTN3-204ENST00000354497 A0A087WVE0 104 aa7.08□□□□□ -1.28
RTN3-204ENST00000354497 NDUFA1O15239 70 aa7.08□□□□□ -1.28
RTN3-204ENST00000354497 LPAP08519 4548 aa7.07□□□□□ -1.28
RTN3-204ENST00000354497 A0A087WWL8 130 aa7.07□□□□□ -1.28
RTN3-204ENST00000354497 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
RTN3-204ENST00000354497 NDUFS5O43920 106 aa7.07□□□□□ -1.28
RTN3-204ENST00000354497 LINC00474Q9P2X8 69 aa7.07□□□□□ -1.28
RTN3-204ENST00000354497 IGHV3-64A0A075B6Q5 118 aa7.06□□□□□ -1.28
RTN3-204ENST00000354497 F8WEM9 126 aa7.06□□□□□ -1.28
RTN3-204ENST00000354497 RPL36AP83881 106 aaKnown RBP7.06□□□□□ -1.28
RTN3-204ENST00000354497 KTN1-AS1Q86SY8 53 aa7.06□□□□□ -1.28
RTN3-204ENST00000354497 RPL36ALQ969Q0 106 aaKnown RBP7.06□□□□□ -1.28
RTN3-204ENST00000354497 LINC00308Q8TCZ7 52 aa7.05□□□□□ -1.28
RTN3-204ENST00000354497 PRR3P79522 188 aaKnown RBP7.04□□□□□ -1.28
RTN3-204ENST00000354497 REG3GQ6UW15 175 aa7.04□□□□□ -1.28
RTN3-204ENST00000354497 C20orf203Q8NBC4 194 aa7.04□□□□□ -1.28
RTN3-204ENST00000354497 SPACA4Q8TDM5 124 aa7.04□□□□□ -1.28
RTN3-204ENST00000354497 RPL39LQ96EH5 51 aaKnown RBP7.04□□□□□ -1.28
RTN3-204ENST00000354497 IGLV5-45A0A087WSX0 123 aa7.03□□□□□ -1.28
RTN3-204ENST00000354497 TRBV6-8A0A0A6YYG3 113 aa7.03□□□□□ -1.28
RTN3-204ENST00000354497 TRBV7-4A0A0J9YYF1 115 aa7.03□□□□□ -1.28
RTN3-204ENST00000354497 LINC00167Q96N53 147 aa7.03□□□□□ -1.28
RTN3-204ENST00000354497 IGLV10-54A0A075B6I4 117 aa7.02□□□□□ -1.29
RTN3-204ENST00000354497 KRTAP10-8P60410 259 aa7.02□□□□□ -1.29
RTN3-204ENST00000354497 CNBPP62633 177 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms