RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 C19orf73Q9NVV2 129 aa5.08□□□□□ -1.6
BRCA1-201ENST00000352993 FSHBP01225 129 aa5.08□□□□□ -1.6
BRCA1-201ENST00000352993 PRR15Q8IV56 129 aa5.08□□□□□ -1.6
BRCA1-201ENST00000352993 LINC00612Q8N6U2 182 aa5.08□□□□□ -1.6
BRCA1-201ENST00000352993 DNHD1Q96M86 4753 aa5.07□□□□□ -1.6
BRCA1-201ENST00000352993 NKAPP1Q8N9T2 125 aa5.07□□□□□ -1.6
BRCA1-201ENST00000352993 ACANP16112 2415 aa5.07□□□□□ -1.6
BRCA1-201ENST00000352993 TRAV22A0A0B4J277 110 aa5.07□□□□□ -1.6
BRCA1-201ENST00000352993 A8MUN3 132 aa5.07□□□□□ -1.6
BRCA1-201ENST00000352993 KPRPQ5T749 579 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-201ENST00000352993 LINC00528Q8N1L1 170 aa5.07□□□□□ -1.6
BRCA1-201ENST00000352993 SPTSSBQ8NFR3 76 aa5.07□□□□□ -1.6
BRCA1-201ENST00000352993 RETNQ9HD89 108 aa5.07□□□□□ -1.6
BRCA1-201ENST00000352993 MAST4O15021 2626 aa5.06□□□□□ -1.6
BRCA1-201ENST00000352993 ETDCA0A1B0GVM5 59 aa5.06□□□□□ -1.6
BRCA1-201ENST00000352993 VPREB1P12018 145 aa5.06□□□□□ -1.6
BRCA1-201ENST00000352993 DEFB116Q30KQ4 102 aa5.06□□□□□ -1.6
BRCA1-201ENST00000352993 FASNP49327 2511 aaKnown RBP5.05□□□□□ -1.6
BRCA1-201ENST00000352993 X6R8D5 127 aa5.05□□□□□ -1.6
BRCA1-201ENST00000352993 Q6ZRU5 148 aa5.05□□□□□ -1.6
BRCA1-201ENST00000352993 WFDC13Q8IUB5 93 aa5.05□□□□□ -1.6
BRCA1-201ENST00000352993 Q1T7F1 81 aa5.04□□□□□ -1.6
BRCA1-201ENST00000352993 C1orf137Q5JT78 98 aa5.04□□□□□ -1.6
BRCA1-201ENST00000352993 NOTCH2Q04721 2471 aa5.04□□□□□ -1.6
BRCA1-201ENST00000352993 CHKB-CPT1BH3BT56 60 aa5.04□□□□□ -1.6
BRCA1-201ENST00000352993 KRTAP10-9P60411 292 aa5.04□□□□□ -1.6
BRCA1-201ENST00000352993 LELP1Q5T871 98 aa5.04□□□□□ -1.6
BRCA1-201ENST00000352993 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-201ENST00000352993 RPL37AP8A6NKH3 93 aa5.04□□□□□ -1.6
BRCA1-201ENST00000352993 LYRM9A8MSI8 78 aa5.04□□□□□ -1.6
BRCA1-201ENST00000352993 ST20-AS1Q8NBB2 130 aa5.04□□□□□ -1.6
BRCA1-201ENST00000352993 CMYA5Q8N3K9 4069 aa5.04□□□□□ -1.6
BRCA1-201ENST00000352993 K7EQZ3 153 aa5.03□□□□□ -1.6
BRCA1-201ENST00000352993 MP68P56378 58 aa5.03□□□□□ -1.6
BRCA1-201ENST00000352993 Q8N377 158 aa5.03□□□□□ -1.6
BRCA1-201ENST00000352993 GVQW2A0A096LPI5 108 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-201ENST00000352993 WFDC10BQ8IUB3 73 aa5.03□□□□□ -1.6
BRCA1-201ENST00000352993 MRPL55Q7Z7F7 128 aaKnown RBP5.02□□□□□ -1.61
BRCA1-201ENST00000352993 KRTAP1-3Q8IUG1 177 aa5.02□□□□□ -1.61
BRCA1-201ENST00000352993 LINC00208Q96KT6 92 aa5.02□□□□□ -1.61
BRCA1-201ENST00000352993 EGFEM1PQ0D2K5 195 aa5.02□□□□□ -1.61
BRCA1-201ENST00000352993 A0A1W2PNM2 257 aa5.02□□□□□ -1.61
BRCA1-201ENST00000352993 A8MU10 97 aa5.02□□□□□ -1.61
BRCA1-201ENST00000352993 IGKV2D-24A0A075B6R9 120 aa5.01□□□□□ -1.61
BRCA1-201ENST00000352993 PSCAO43653 123 aa5.01□□□□□ -1.61
BRCA1-201ENST00000352993 UBE2BP63146 152 aa5.01□□□□□ -1.61
BRCA1-201ENST00000352993 DEFB113Q30KQ7 82 aa5.01□□□□□ -1.61
BRCA1-201ENST00000352993 PRR15LQ9BU68 103 aa5.01□□□□□ -1.61
BRCA1-201ENST00000352993 ITPR2Q14571 2701 aa5.01□□□□□ -1.61
BRCA1-201ENST00000352993 HCG22E2RYF7 251 aa5□□□□□ -1.61
BRCA1-201ENST00000352993 SPART-AS1P0CW21 52 aa5□□□□□ -1.61
BRCA1-201ENST00000352993 A0A0G2JQZ4 141 aa5□□□□□ -1.61
BRCA1-201ENST00000352993 A0A1W2PNN7 141 aa5□□□□□ -1.61
BRCA1-201ENST00000352993 NDUFB1O75438 58 aa5□□□□□ -1.61
BRCA1-201ENST00000352993 SYCNQ0VAF6 134 aa5□□□□□ -1.61
BRCA1-201ENST00000352993 B9D2Q9BPU9 175 aa5□□□□□ -1.61
BRCA1-201ENST00000352993 PRR34Q9NV39 138 aa5□□□□□ -1.61
BRCA1-201ENST00000352993 FLNAP21333 2647 aaKnown RBP4.99□□□□□ -1.61
BRCA1-201ENST00000352993 C7orf33Q8WU49 177 aa4.99□□□□□ -1.61
BRCA1-201ENST00000352993 DSCR10P59022 87 aa4.99□□□□□ -1.61
BRCA1-201ENST00000352993 Q8NBF4 154 aa4.99□□□□□ -1.61
BRCA1-201ENST00000352993 A6NED7 52 aa4.98□□□□□ -1.61
BRCA1-201ENST00000352993 CD164Q04900 197 aa4.98□□□□□ -1.61
BRCA1-201ENST00000352993 IGLV5-48A0A075B6I7 105 aa4.98□□□□□ -1.61
BRCA1-201ENST00000352993 UBE2AP49459 152 aa4.98□□□□□ -1.61
BRCA1-201ENST00000352993 SERTAD4-AS1Q5TG53 156 aa4.98□□□□□ -1.61
BRCA1-201ENST00000352993 DHRS4-AS1Q9P1J3 65 aa4.98□□□□□ -1.61
BRCA1-201ENST00000352993 APOC4P55056 127 aa4.97□□□□□ -1.61
BRCA1-201ENST00000352993 ITPR3Q14573 2671 aa4.97□□□□□ -1.61
BRCA1-201ENST00000352993 ZCCHC13Q8WW36 166 aaKnown RBP4.97□□□□□ -1.61
BRCA1-201ENST00000352993 HECTD1Q9ULT8 2610 aa4.96□□□□□ -1.62
BRCA1-201ENST00000352993 Q5VV11 94 aa4.96□□□□□ -1.62
BRCA1-201ENST00000352993 CYP4F30PQ9H0H9 118 aa4.96□□□□□ -1.62
BRCA1-201ENST00000352993 RPL37AP61513 92 aaKnown RBP4.95□□□□□ -1.62
BRCA1-201ENST00000352993 KCNQ1DNQ9H478 68 aa4.95□□□□□ -1.62
BRCA1-201ENST00000352993 Q6ZRX8 168 aa4.95□□□□□ -1.62
BRCA1-201ENST00000352993 C15orf56Q8N910 161 aa4.95□□□□□ -1.62
BRCA1-201ENST00000352993 H0Y9P7 68 aa4.95□□□□□ -1.62
BRCA1-201ENST00000352993 A0A087WSZ3 146 aa4.94□□□□□ -1.62
BRCA1-201ENST00000352993 LCE6AA0A183 80 aa4.94□□□□□ -1.62
BRCA1-201ENST00000352993 FAM168BA1KXE4 195 aa4.94□□□□□ -1.62
BRCA1-201ENST00000352993 Q9BRP9 147 aa4.94□□□□□ -1.62
BRCA1-201ENST00000352993 LIMD2Q9BT23 127 aa4.94□□□□□ -1.62
BRCA1-201ENST00000352993 A0A1B0GW54 56 aa4.93□□□□□ -1.62
BRCA1-201ENST00000352993 C16orf90A8MZG2 172 aa4.93□□□□□ -1.62
BRCA1-201ENST00000352993 LINC00476Q8WZB0 136 aa4.93□□□□□ -1.62
BRCA1-201ENST00000352993 DNAH3Q8TD57 4116 aa4.93□□□□□ -1.62
BRCA1-201ENST00000352993 HIVEP1P15822 2718 aa4.92□□□□□ -1.62
BRCA1-201ENST00000352993 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
BRCA1-201ENST00000352993 Q8NAQ8 132 aa4.92□□□□□ -1.62
BRCA1-201ENST00000352993 Q8N9P0 234 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-201ENST00000352993 RBM12B-AS1Q9P1G2 102 aa4.92□□□□□ -1.62
BRCA1-201ENST00000352993 CASC2Q6XLA1 102 aa4.91□□□□□ -1.62
BRCA1-201ENST00000352993 KRTAP1-1Q07627 177 aa4.91□□□□□ -1.62
BRCA1-201ENST00000352993 SPRR4Q96PI1 79 aa4.91□□□□□ -1.62
BRCA1-201ENST00000352993 LINC00588Q9Y4M8 146 aa4.91□□□□□ -1.62
BRCA1-201ENST00000352993 PCOTHQ58A44 107 aa4.9□□□□□ -1.63
BRCA1-201ENST00000352993 A0A096LNI7 61 aa4.9□□□□□ -1.63
BRCA1-201ENST00000352993 H0Y9J4 135 aa4.89□□□□□ -1.63
BRCA1-201ENST00000352993 TNP2Q05952 138 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms