RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 CHTF8P0CG12 524 aa7.95□□□□□ -1.14
COL12A1-202ENST00000345356 CSNK1G2-AS1Q8NCQ2 148 aa7.95□□□□□ -1.14
COL12A1-202ENST00000345356 PRR34Q9NV39 138 aa7.94□□□□□ -1.14
COL12A1-202ENST00000345356 ANKRD11Q6UB99 2663 aaPredicted RBP7.93□□□□□ -1.14
COL12A1-202ENST00000345356 H3BS24 57 aa7.93□□□□□ -1.14
COL12A1-202ENST00000345356 FAM104AQ969W3 186 aa7.92□□□□□ -1.14
COL12A1-202ENST00000345356 C15orf56Q8N910 161 aa7.92□□□□□ -1.14
COL12A1-202ENST00000345356 LRRK2Q5S007 2527 aa7.92□□□□□ -1.14
COL12A1-202ENST00000345356 A0A1B0GVX0 72 aa7.91□□□□□ -1.14
COL12A1-202ENST00000345356 ZFYVE26Q68DK2 2539 aa7.91□□□□□ -1.14
COL12A1-202ENST00000345356 A0A096LNT2 108 aa7.91□□□□□ -1.14
COL12A1-202ENST00000345356 Q75L30 129 aa7.91□□□□□ -1.14
COL12A1-202ENST00000345356 PIEZO1Q92508 2521 aa7.9□□□□□ -1.14
COL12A1-202ENST00000345356 MTORP42345 2549 aa7.9□□□□□ -1.14
COL12A1-202ENST00000345356 PRRC2CQ9Y520 2896 aaKnown RBP7.9□□□□□ -1.14
COL12A1-202ENST00000345356 UTRNP46939 3433 aa7.9□□□□□ -1.14
COL12A1-202ENST00000345356 IGLV5-48A0A075B6I7 105 aa7.9□□□□□ -1.15
COL12A1-202ENST00000345356 LINC00588Q9Y4M8 146 aa7.89□□□□□ -1.15
COL12A1-202ENST00000345356 GIG44P09565 113 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-202ENST00000345356 F8P00451 2351 aa7.87□□□□□ -1.15
COL12A1-202ENST00000345356 LINC01554Q52M75 96 aa7.87□□□□□ -1.15
COL12A1-202ENST00000345356 C1orf134Q5TEV5 83 aa7.87□□□□□ -1.15
COL12A1-202ENST00000345356 DNAH10OSP0CZ25 163 aa7.87□□□□□ -1.15
COL12A1-202ENST00000345356 DSCR10P59022 87 aa7.87□□□□□ -1.15
COL12A1-202ENST00000345356 PRR26Q8N8Z3 221 aa7.86□□□□□ -1.15
COL12A1-202ENST00000345356 Q8N9P0 234 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-202ENST00000345356 Q96NJ1 140 aa7.86□□□□□ -1.15
COL12A1-202ENST00000345356 PRAC1Q96KF2 57 aa7.84□□□□□ -1.15
COL12A1-202ENST00000345356 DNAH12Q6ZR08 3092 aa7.84□□□□□ -1.15
COL12A1-202ENST00000345356 Q5VV11 94 aa7.84□□□□□ -1.15
COL12A1-202ENST00000345356 CRIPTQ9P021 101 aa7.84□□□□□ -1.15
COL12A1-202ENST00000345356 POLQO75417 2590 aa7.84□□□□□ -1.15
COL12A1-202ENST00000345356 PLA2G2DQ9UNK4 145 aa7.83□□□□□ -1.16
COL12A1-202ENST00000345356 BPTFQ12830 3046 aa7.83□□□□□ -1.16
COL12A1-202ENST00000345356 IGLV7-46A0A075B6I9 117 aa7.82□□□□□ -1.16
COL12A1-202ENST00000345356 LINC00612Q8N6U2 182 aa7.82□□□□□ -1.16
COL12A1-202ENST00000345356 C9orf163Q8N9P6 203 aa7.81□□□□□ -1.16
COL12A1-202ENST00000345356 TLX1NBP0CAT3 122 aa7.81□□□□□ -1.16
COL12A1-202ENST00000345356 C19orf73Q9NVV2 129 aa7.79□□□□□ -1.16
COL12A1-202ENST00000345356 SPRR4Q96PI1 79 aa7.79□□□□□ -1.16
COL12A1-202ENST00000345356 APLNQ9ULZ1 77 aa7.79□□□□□ -1.16
COL12A1-202ENST00000345356 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
COL12A1-202ENST00000345356 A0A0C4DFX4 3053 aa7.78□□□□□ -1.16
COL12A1-202ENST00000345356 RTL8CO15255 209 aa7.78□□□□□ -1.16
COL12A1-202ENST00000345356 CHD8Q9HCK8 2581 aa7.76□□□□□ -1.17
COL12A1-202ENST00000345356 ANKRD17O75179 2603 aaKnown RBP7.76□□□□□ -1.17
COL12A1-202ENST00000345356 TYMSOSQ8TAI1 123 aa7.75□□□□□ -1.17
COL12A1-202ENST00000345356 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
COL12A1-202ENST00000345356 SPTBN4Q9H254 2564 aa7.75□□□□□ -1.17
COL12A1-202ENST00000345356 NBDYA0A0U1RRE5 68 aa7.74□□□□□ -1.17
COL12A1-202ENST00000345356 Q8NDZ9 215 aa7.72□□□□□ -1.17
COL12A1-202ENST00000345356 CR1P17927 2039 aa7.72□□□□□ -1.17
COL12A1-202ENST00000345356 ANAPC11Q9NYG5 84 aa7.72□□□□□ -1.17
COL12A1-202ENST00000345356 CNBPP62633 177 aaKnown RBP7.71□□□□□ -1.17
COL12A1-202ENST00000345356 ACANP16112 2415 aa7.71□□□□□ -1.18
COL12A1-202ENST00000345356 SPINK7P58062 85 aa7.71□□□□□ -1.18
COL12A1-202ENST00000345356 CEP350Q5VT06 3117 aa7.71□□□□□ -1.18
COL12A1-202ENST00000345356 IGLV5-37A0A075B6J1 123 aa7.69□□□□□ -1.18
COL12A1-202ENST00000345356 CASC10Q5T4H9 136 aa7.69□□□□□ -1.18
COL12A1-202ENST00000345356 Q8N1X5 172 aa7.69□□□□□ -1.18
COL12A1-202ENST00000345356 ZNF861PO60384 105 aa7.68□□□□□ -1.18
COL12A1-202ENST00000345356 CSAG1Q6PB30 78 aa7.68□□□□□ -1.18
COL12A1-202ENST00000345356 WWC2-AS2Q96NR7 200 aa7.67□□□□□ -1.18
COL12A1-202ENST00000345356 HRES1P13985 223 aa7.66□□□□□ -1.18
COL12A1-202ENST00000345356 A0A0D9SG42 100 aa7.66□□□□□ -1.18
COL12A1-202ENST00000345356 PCNTO95613 3336 aa7.64□□□□□ -1.19
COL12A1-202ENST00000345356 MMP24-AS1A0A0U1RRL7 71 aa7.63□□□□□ -1.19
COL12A1-202ENST00000345356 COX6B2Q6YFQ2 88 aa7.6□□□□□ -1.19
COL12A1-202ENST00000345356 A0A1B0GU33 70 aa7.58□□□□□ -1.2
COL12A1-202ENST00000345356 PSORS1C2Q9UIG4 136 aa7.58□□□□□ -1.2
COL12A1-202ENST00000345356 C9orf92A6NGG3 77 aa7.58□□□□□ -1.2
COL12A1-202ENST00000345356 KRTAP10-3P60369 221 aa7.55□□□□□ -1.2
COL12A1-202ENST00000345356 KRTAP10-11P60412 298 aa7.55□□□□□ -1.2
COL12A1-202ENST00000345356 IGLV7-43P04211 117 aa7.53□□□□□ -1.2
COL12A1-202ENST00000345356 KRTAP24-1Q3LI83 254 aa7.53□□□□□ -1.2
COL12A1-202ENST00000345356 SPRR1AP35321 89 aa7.53□□□□□ -1.2
COL12A1-202ENST00000345356 LINC00304Q8N9R0 145 aa7.52□□□□□ -1.21
COL12A1-202ENST00000345356 LUZP6Q538Z0 58 aa7.52□□□□□ -1.21
COL12A1-202ENST00000345356 LINC00472Q9H8W2 130 aa7.52□□□□□ -1.21
COL12A1-202ENST00000345356 EPG5Q9HCE0 2579 aa7.51□□□□□ -1.21
COL12A1-202ENST00000345356 A0A087WTM6 91 aa7.5□□□□□ -1.21
COL12A1-202ENST00000345356 ZCCHC13Q8WW36 166 aaKnown RBP7.48□□□□□ -1.21
COL12A1-202ENST00000345356 C5orf42Q9H799 3197 aa7.48□□□□□ -1.21
COL12A1-202ENST00000345356 CFAP54Q96N23 3096 aa7.48□□□□□ -1.21
COL12A1-202ENST00000345356 USP24Q9UPU5 2620 aa7.48□□□□□ -1.21
COL12A1-202ENST00000345356 DMAC1Q96GE9 116 aa7.46□□□□□ -1.21
COL12A1-202ENST00000345356 A6NN06 94 aa7.46□□□□□ -1.22
COL12A1-202ENST00000345356 FASNP49327 2511 aaKnown RBP7.44□□□□□ -1.22
COL12A1-202ENST00000345356 Q5W150 140 aa7.44□□□□□ -1.22
COL12A1-202ENST00000345356 ASB16-AS1Q495Z4 193 aa7.43□□□□□ -1.22
COL12A1-202ENST00000345356 K7EIL1 84 aa7.43□□□□□ -1.22
COL12A1-202ENST00000345356 TNP2Q05952 138 aa7.42□□□□□ -1.22
COL12A1-202ENST00000345356 SPRR1BP22528 89 aa7.4□□□□□ -1.23
COL12A1-202ENST00000345356 CHD7Q9P2D1 2997 aa7.39□□□□□ -1.23
COL12A1-202ENST00000345356 A8MU10 97 aa7.39□□□□□ -1.23
COL12A1-202ENST00000345356 KRTAP29-1A8MX34 341 aaPredicted RBP7.39□□□□□ -1.23
COL12A1-202ENST00000345356 KRTAP26-1Q6PEX3 210 aa7.38□□□□□ -1.23
COL12A1-202ENST00000345356 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.36□□□□□ -1.23
COL12A1-202ENST00000345356 Q6ZR54 194 aa7.35□□□□□ -1.23
COL12A1-202ENST00000345356 A0A0A0MQY5 61 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms