RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 SPANXCQ9NY87 97 aa10.69□□□□□ -0.7
USF2-202ENST00000343550 SCGB1D1O95968 90 aa10.68□□□□□ -0.7
USF2-202ENST00000343550 S100A12P80511 92 aa10.68□□□□□ -0.7
USF2-202ENST00000343550 C4orf48Q5BLP8 95 aa10.68□□□□□ -0.7
USF2-202ENST00000343550 S100A7L2Q5SY68 101 aa10.68□□□□□ -0.7
USF2-202ENST00000343550 SPANXDQ9BXN6 97 aa10.68□□□□□ -0.7
USF2-202ENST00000343550 HSBP1L1C9JCN9 74 aa10.68□□□□□ -0.7
USF2-202ENST00000343550 ANAPC11Q9NYG5 84 aa10.68□□□□□ -0.7
USF2-202ENST00000343550 LPAP08519 4548 aa10.67□□□□□ -0.7
USF2-202ENST00000343550 RPL13AP40429 203 aaKnown RBP10.67□□□□□ -0.7
USF2-202ENST00000343550 HIGD2AQ9BW72 106 aa10.67□□□□□ -0.7
USF2-202ENST00000343550 ETDCA0A1B0GVM5 59 aa10.66□□□□□ -0.7
USF2-202ENST00000343550 A0A087X002 238 aa10.65□□□□□ -0.7
USF2-202ENST00000343550 CRYGAP11844 174 aa10.64□□□□□ -0.71
USF2-202ENST00000343550 Q6ZVH6 145 aa10.64□□□□□ -0.71
USF2-202ENST00000343550 B5MCH6 92 aa10.63□□□□□ -0.71
USF2-202ENST00000343550 IFITM1P13164 125 aa10.63□□□□□ -0.71
USF2-202ENST00000343550 PPDPFQ9H3Y8 114 aa10.63□□□□□ -0.71
USF2-202ENST00000343550 TRAV23DV6A0A075B6W5 121 aa10.62□□□□□ -0.71
USF2-202ENST00000343550 FAM229BQ4G0N7 80 aa10.62□□□□□ -0.71
USF2-202ENST00000343550 MUSTN1Q8IVN3 82 aa10.62□□□□□ -0.71
USF2-202ENST00000343550 SMCR5Q8TEV8 140 aa10.62□□□□□ -0.71
USF2-202ENST00000343550 OR13C6PQ8NH95 151 aa10.61□□□□□ -0.71
USF2-202ENST00000343550 COPS9Q8WXC6 57 aa10.61□□□□□ -0.71
USF2-202ENST00000343550 ZNF73O43830 326 aaPredicted RBP10.6□□□□□ -0.71
USF2-202ENST00000343550 KRTAP13-2Q52LG2 175 aa10.59□□□□□ -0.71
USF2-202ENST00000343550 CBY1Q9Y3M2 126 aa10.59□□□□□ -0.71
USF2-202ENST00000343550 Q6ZRX8 168 aa10.58□□□□□ -0.72
USF2-202ENST00000343550 TYMSOSQ8TAI1 123 aa10.58□□□□□ -0.72
USF2-202ENST00000343550 SPRR4Q96PI1 79 aa10.58□□□□□ -0.72
USF2-202ENST00000343550 Q9BRP9 147 aa10.58□□□□□ -0.72
USF2-202ENST00000343550 ERC2-IT1O76042 136 aa10.56□□□□□ -0.72
USF2-202ENST00000343550 PRR4Q16378 134 aa10.56□□□□□ -0.72
USF2-202ENST00000343550 ZNF706Q9Y5V0 76 aaPredicted RBP10.56□□□□□ -0.72
USF2-202ENST00000343550 PCP4L1A6NKN8 68 aa10.55□□□□□ -0.72
USF2-202ENST00000343550 COX8AP10176 69 aa10.54□□□□□ -0.72
USF2-202ENST00000343550 HINT1P49773 126 aaPredicted RBP10.53□□□□□ -0.72
USF2-202ENST00000343550 TSTD3H0UI37 97 aa10.52□□□□□ -0.73
USF2-202ENST00000343550 A6NDN8 102 aa10.51□□□□□ -0.73
USF2-202ENST00000343550 DLEU1O43261 78 aa10.51□□□□□ -0.73
USF2-202ENST00000343550 C3orf22Q8N5N4 141 aa10.51□□□□□ -0.73
USF2-202ENST00000343550 PAM16Q9Y3D7 125 aa10.51□□□□□ -0.73
USF2-202ENST00000343550 C14orf144Q96I85 54 aa10.5□□□□□ -0.73
USF2-202ENST00000343550 TSPAN13O95857 204 aa10.49□□□□□ -0.73
USF2-202ENST00000343550 C6orf99Q4VX62 202 aa10.49□□□□□ -0.73
USF2-202ENST00000343550 SPATA45Q537H7 98 aa10.49□□□□□ -0.73
USF2-202ENST00000343550 LINC00483Q53H64 154 aa10.49□□□□□ -0.73
USF2-202ENST00000343550 GAGE2AQ6NT46 116 aa10.49□□□□□ -0.73
USF2-202ENST00000343550 VAMP8Q9BV40 100 aa10.48□□□□□ -0.73
USF2-202ENST00000343550 TRAV13-2A0A0B4J235 113 aa10.48□□□□□ -0.73
USF2-202ENST00000343550 A4D1N5 150 aa10.47□□□□□ -0.73
USF2-202ENST00000343550 ELOF1P60002 83 aaKnown RBP10.47□□□□□ -0.73
USF2-202ENST00000343550 TRBV7-6A0A0J9YX20 115 aa10.46□□□□□ -0.74
USF2-202ENST00000343550 COX7BP24311 80 aa10.46□□□□□ -0.74
USF2-202ENST00000343550 HIST1H4GQ99525 98 aa10.46□□□□□ -0.74
USF2-202ENST00000343550 LINC00304Q8N9R0 145 aa10.45□□□□□ -0.74
USF2-202ENST00000343550 PRO1933Q9H354 126 aa10.45□□□□□ -0.74
USF2-202ENST00000343550 DHRS4-AS1Q9P1J3 65 aa10.45□□□□□ -0.74
USF2-202ENST00000343550 MUC2Q02817 5179 aa10.45□□□□□ -0.74
USF2-202ENST00000343550 ST20-AS1Q8NBB2 130 aa10.44□□□□□ -0.74
USF2-202ENST00000343550 SLC25A34Q6PIV7 304 aa10.43□□□□□ -0.74
USF2-202ENST00000343550 SMIM11BQ8TCY0 68 aa10.43□□□□□ -0.74
USF2-202ENST00000343550 HIGD1BQ9P298 99 aa10.43□□□□□ -0.74
USF2-202ENST00000343550 A0A1B0GWB2 263 aa10.41□□□□□ -0.74
USF2-202ENST00000343550 CTAG1AP78358 180 aa10.39□□□□□ -0.75
USF2-202ENST00000343550 C2orf91Q6ZV80 131 aa10.39□□□□□ -0.75
USF2-202ENST00000343550 IGLV9-49A0A0B4J1Y8 123 aa10.38□□□□□ -0.75
USF2-202ENST00000343550 Q8NBF4 154 aa10.38□□□□□ -0.75
USF2-202ENST00000343550 SPAG11AQ6PDA7 123 aa10.38□□□□□ -0.75
USF2-202ENST00000343550 SPRR1BP22528 89 aa10.37□□□□□ -0.75
USF2-202ENST00000343550 SSBP3-AS1Q7Z2R9 100 aa10.37□□□□□ -0.75
USF2-202ENST00000343550 MOBPQ13875 183 aa10.36□□□□□ -0.75
USF2-202ENST00000343550 UQCR10Q9UDW1 63 aa10.35□□□□□ -0.75
USF2-202ENST00000343550 CFC1BP0CG36 223 aa10.33□□□□□ -0.76
USF2-202ENST00000343550 CFC1P0CG37 223 aa10.33□□□□□ -0.76
USF2-202ENST00000343550 VAMP3Q15836 100 aa10.33□□□□□ -0.76
USF2-202ENST00000343550 TAL2Q16559 108 aa10.33□□□□□ -0.76
USF2-202ENST00000343550 A0A0U1RQV1 116 aa10.33□□□□□ -0.76
USF2-202ENST00000343550 DEFB105AQ8NG35 78 aa10.33□□□□□ -0.76
USF2-202ENST00000343550 RETNLBQ9BQ08 111 aa10.32□□□□□ -0.76
USF2-202ENST00000343550 CEND1Q8N111 149 aa10.31□□□□□ -0.76
USF2-202ENST00000343550 TEX49A0A1B0GTD5 131 aa10.3□□□□□ -0.76
USF2-202ENST00000343550 SPINK1P00995 79 aa10.3□□□□□ -0.76
USF2-202ENST00000343550 NHP2Q9NX24 153 aaKnown RBP10.3□□□□□ -0.76
USF2-202ENST00000343550 LINC01547P58512 204 aaPredicted RBP10.29□□□□□ -0.76
USF2-202ENST00000343550 C9orf153Q5TBE3 101 aa10.29□□□□□ -0.76
USF2-202ENST00000343550 LINC00575Q6W349 94 aa10.29□□□□□ -0.76
USF2-202ENST00000343550 LAMTOR3Q9UHA4 124 aa10.29□□□□□ -0.76
USF2-202ENST00000343550 IGLV5-48A0A075B6I7 105 aa10.28□□□□□ -0.76
USF2-202ENST00000343550 RAB37Q96AX2 223 aa10.28□□□□□ -0.76
USF2-202ENST00000343550 A0A0B4J2C4 111 aa10.28□□□□□ -0.76
USF2-202ENST00000343550 SLC25A20O43772 301 aa10.28□□□□□ -0.76
USF2-202ENST00000343550 SMIM29Q86T20 159 aa10.27□□□□□ -0.77
USF2-202ENST00000343550 H7C2G1 150 aa10.26□□□□□ -0.77
USF2-202ENST00000343550 FXYD2P54710 66 aa10.25□□□□□ -0.77
USF2-202ENST00000343550 Q1RN00 199 aa10.25□□□□□ -0.77
USF2-202ENST00000343550 BVES-AS1Q5T3Y7 98 aa10.25□□□□□ -0.77
USF2-202ENST00000343550 hADV29S1A0JD25 119 aa10.24□□□□□ -0.77
USF2-202ENST00000343550 Q8N377 158 aa10.24□□□□□ -0.77
USF2-202ENST00000343550 IGLV7-46A0A075B6I9 117 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms