RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 A0A0U1RQV1 116 aa5.11□□□□□ -1.59
HIPK1-201ENST00000340480 ELOF1P60002 83 aaKnown RBP5.11□□□□□ -1.59
HIPK1-201ENST00000340480 IGLV6-57P01721 117 aa5.11□□□□□ -1.59
HIPK1-201ENST00000340480 LINC00313P59037 77 aa5.11□□□□□ -1.59
HIPK1-201ENST00000340480 XIRP2A4UGR9 3374 aa5.1□□□□□ -1.59
HIPK1-201ENST00000340480 K7EIL1 84 aa5.1□□□□□ -1.59
HIPK1-201ENST00000340480 SPAG11AQ6PDA7 123 aa5.1□□□□□ -1.59
HIPK1-201ENST00000340480 C1orf64Q8NEQ6 169 aa5.1□□□□□ -1.59
HIPK1-201ENST00000340480 CFAP54Q96N23 3096 aa5.09□□□□□ -1.59
HIPK1-201ENST00000340480 A0A1B0GU69 56 aa5.09□□□□□ -1.59
HIPK1-201ENST00000340480 FAM218AQ96MZ4 157 aa5.09□□□□□ -1.59
HIPK1-201ENST00000340480 C8orf87E5RJ46 101 aa5.09□□□□□ -1.6
HIPK1-201ENST00000340480 TLX1NBP0CAT3 122 aa5.09□□□□□ -1.6
HIPK1-201ENST00000340480 VPREB1P12018 145 aa5.09□□□□□ -1.6
HIPK1-201ENST00000340480 LOC110117498A0A087WWA1 95 aa5.09□□□□□ -1.6
HIPK1-201ENST00000340480 MAST4O15021 2626 aa5.08□□□□□ -1.6
HIPK1-201ENST00000340480 Q8N3U1 123 aa5.08□□□□□ -1.6
HIPK1-201ENST00000340480 LINC00167Q96N53 147 aa5.08□□□□□ -1.6
HIPK1-201ENST00000340480 PLA2G2DQ9UNK4 145 aa5.08□□□□□ -1.6
HIPK1-201ENST00000340480 BCE1O60756 84 aa5.07□□□□□ -1.6
HIPK1-201ENST00000340480 DEFB116Q30KQ4 102 aa5.07□□□□□ -1.6
HIPK1-201ENST00000340480 Q96NJ1 140 aa5.07□□□□□ -1.6
HIPK1-201ENST00000340480 CXCL6P80162 114 aa5.06□□□□□ -1.6
HIPK1-201ENST00000340480 EIF4EBP3O60516 100 aaPredicted RBP5.06□□□□□ -1.6
HIPK1-201ENST00000340480 H3BPC8 53 aa5.06□□□□□ -1.6
HIPK1-201ENST00000340480 C15orf56Q8N910 161 aa5.05□□□□□ -1.6
HIPK1-201ENST00000340480 LINC00846Q9NV44 126 aa5.05□□□□□ -1.6
HIPK1-201ENST00000340480 Q6ZRX8 168 aa5.05□□□□□ -1.6
HIPK1-201ENST00000340480 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
HIPK1-201ENST00000340480 KCNQ1DNQ9H478 68 aa5.05□□□□□ -1.6
HIPK1-201ENST00000340480 UBR5O95071 2799 aaPredicted RBP5.05□□□□□ -1.6
HIPK1-201ENST00000340480 C1orf195Q5TG92 126 aa5.04□□□□□ -1.6
HIPK1-201ENST00000340480 RBM12B-AS1Q9P1G2 102 aa5.04□□□□□ -1.6
HIPK1-201ENST00000340480 SPTBN5Q9NRC6 3674 aaKnown RBP5.04□□□□□ -1.6
HIPK1-201ENST00000340480 VCANP13611 3396 aa5.04□□□□□ -1.6
HIPK1-201ENST00000340480 PHF5AQ7RTV0 110 aaKnown RBP5.04□□□□□ -1.6
HIPK1-201ENST00000340480 LINC00304Q8N9R0 145 aa5.03□□□□□ -1.6
HIPK1-201ENST00000340480 TEX15Q9BXT5 2789 aa5.03□□□□□ -1.6
HIPK1-201ENST00000340480 TRAV22A0A0B4J277 110 aa5.03□□□□□ -1.6
HIPK1-201ENST00000340480 EPM2AB3EWF7 344 aa5.03□□□□□ -1.6
HIPK1-201ENST00000340480 LINC00528Q8N1L1 170 aa5.03□□□□□ -1.6
HIPK1-201ENST00000340480 Q6ZQT0 140 aa5.02□□□□□ -1.61
HIPK1-201ENST00000340480 SETXQ7Z333 2677 aaKnown RBP5.02□□□□□ -1.61
HIPK1-201ENST00000340480 TMEM254Q8TBM7 123 aa5.02□□□□□ -1.61
HIPK1-201ENST00000340480 DMXL2Q8TDJ6 3036 aa5.02□□□□□ -1.61
HIPK1-201ENST00000340480 IGLV5-37A0A075B6J1 123 aa5.01□□□□□ -1.61
HIPK1-201ENST00000340480 COL6A3P12111 3177 aa5.01□□□□□ -1.61
HIPK1-201ENST00000340480 FRYQ5TBA9 3013 aa5.01□□□□□ -1.61
HIPK1-201ENST00000340480 GCN1Q92616 2671 aaKnown RBP5.01□□□□□ -1.61
HIPK1-201ENST00000340480 CNBPP62633 177 aaKnown RBP5.01□□□□□ -1.61
HIPK1-201ENST00000340480 LOC101927531A0A1B0GV80 90 aa5.01□□□□□ -1.61
HIPK1-201ENST00000340480 MGAM2Q2M2H8 2515 aa5□□□□□ -1.61
HIPK1-201ENST00000340480 FRYLO94915 3013 aa5□□□□□ -1.61
HIPK1-201ENST00000340480 IGLV1-50A0A075B6I6 118 aa5□□□□□ -1.61
HIPK1-201ENST00000340480 ATMQ13315 3056 aa5□□□□□ -1.61
HIPK1-201ENST00000340480 CHTF8P0CG12 524 aa4.99□□□□□ -1.61
HIPK1-201ENST00000340480 SSBP3-AS1Q7Z2R9 100 aa4.99□□□□□ -1.61
HIPK1-201ENST00000340480 APLNQ9ULZ1 77 aa4.99□□□□□ -1.61
HIPK1-201ENST00000340480 ITPR1Q14643 2758 aa4.99□□□□□ -1.61
HIPK1-201ENST00000340480 ST20-AS1Q8NBB2 130 aa4.98□□□□□ -1.61
HIPK1-201ENST00000340480 LINC00476Q8WZB0 136 aa4.98□□□□□ -1.61
HIPK1-201ENST00000340480 OBSCN-AS1Q96MR7 158 aa4.98□□□□□ -1.61
HIPK1-201ENST00000340480 ADGRG4Q8IZF6 3080 aa4.97□□□□□ -1.61
HIPK1-201ENST00000340480 MAP1AP78559 2803 aaPredicted RBP4.97□□□□□ -1.61
HIPK1-201ENST00000340480 SMIM29Q86T20 159 aa4.97□□□□□ -1.61
HIPK1-201ENST00000340480 C9orf163Q8N9P6 203 aa4.97□□□□□ -1.61
HIPK1-201ENST00000340480 TEP1Q99973 2627 aaKnown RBP4.97□□□□□ -1.61
HIPK1-201ENST00000340480 A0A087WVE0 104 aa4.97□□□□□ -1.61
HIPK1-201ENST00000340480 CCDC179H3BU77 68 aa4.97□□□□□ -1.61
HIPK1-201ENST00000340480 PSPHP1O15172 72 aa4.97□□□□□ -1.61
HIPK1-201ENST00000340480 HRNRQ86YZ3 2850 aaPredicted RBP4.97□□□□□ -1.61
HIPK1-201ENST00000340480 DMXL1Q9Y485 3027 aa4.96□□□□□ -1.61
HIPK1-201ENST00000340480 C9orf129Q5T035 196 aaKnown RBP4.96□□□□□ -1.61
HIPK1-201ENST00000340480 STAB1Q9NY15 2570 aa4.96□□□□□ -1.61
HIPK1-201ENST00000340480 APCP25054 2843 aa4.96□□□□□ -1.61
HIPK1-201ENST00000340480 TRBV7-4A0A0J9YYF1 115 aa4.96□□□□□ -1.62
HIPK1-201ENST00000340480 SERTAD4-AS1Q5TG53 156 aa4.96□□□□□ -1.62
HIPK1-201ENST00000340480 NSD1Q96L73 2696 aaPredicted RBP4.96□□□□□ -1.62
HIPK1-201ENST00000340480 COL6A5A8TX70 2615 aa4.95□□□□□ -1.62
HIPK1-201ENST00000340480 ITPR2Q14571 2701 aa4.95□□□□□ -1.62
HIPK1-201ENST00000340480 UTP20O75691 2785 aaKnown RBP4.95□□□□□ -1.62
HIPK1-201ENST00000340480 NBEAQ8NFP9 2946 aa4.94□□□□□ -1.62
HIPK1-201ENST00000340480 KALRNO60229 2985 aa4.94□□□□□ -1.62
HIPK1-201ENST00000340480 DNAH14Q0VDD8 3507 aa4.94□□□□□ -1.62
HIPK1-201ENST00000340480 EYSQ5T1H1 3165 aa4.94□□□□□ -1.62
HIPK1-201ENST00000340480 BOD1L1Q8NFC6 3051 aa4.94□□□□□ -1.62
HIPK1-201ENST00000340480 MRPL34Q9BQ48 92 aaKnown RBP4.94□□□□□ -1.62
HIPK1-201ENST00000340480 CRIPTQ9P021 101 aa4.94□□□□□ -1.62
HIPK1-201ENST00000340480 SPINT4Q6UDR6 99 aa4.93□□□□□ -1.62
HIPK1-201ENST00000340480 ZNF861PO60384 105 aa4.93□□□□□ -1.62
HIPK1-201ENST00000340480 COL12A1Q99715 3063 aa4.93□□□□□ -1.62
HIPK1-201ENST00000340480 A8MWP4 228 aa4.92□□□□□ -1.62
HIPK1-201ENST00000340480 A0A087WTM6 91 aa4.92□□□□□ -1.62
HIPK1-201ENST00000340480 KMT2BQ9UMN6 2715 aaPredicted RBP4.91□□□□□ -1.62
HIPK1-201ENST00000340480 FREM2Q5SZK8 3169 aa4.91□□□□□ -1.62
HIPK1-201ENST00000340480 KRTAP26-1Q6PEX3 210 aa4.91□□□□□ -1.62
HIPK1-201ENST00000340480 SMR3BP02814 79 aaPredicted RBP4.9□□□□□ -1.62
HIPK1-201ENST00000340480 IGLV5-48A0A075B6I7 105 aa4.9□□□□□ -1.62
HIPK1-201ENST00000340480 M0R2T5 61 aa4.9□□□□□ -1.62
HIPK1-201ENST00000340480 ERC2-IT1O76042 136 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms