RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 SERTAD4-AS1Q5TG53 156 aa6.94□□□□□ -1.3
TRAF3IP2-201ENST00000340026 DHRS4-AS1Q9P1J3 65 aa6.94□□□□□ -1.3
TRAF3IP2-201ENST00000340026 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
TRAF3IP2-201ENST00000340026 LOC107984640A0A0U1RRK4 108 aa6.93□□□□□ -1.3
TRAF3IP2-201ENST00000340026 CNBPP62633 177 aaKnown RBP6.93□□□□□ -1.3
TRAF3IP2-201ENST00000340026 CXCL6P80162 114 aa6.93□□□□□ -1.3
TRAF3IP2-201ENST00000340026 C3orf22Q8N5N4 141 aa6.93□□□□□ -1.3
TRAF3IP2-201ENST00000340026 COX7CP15954 63 aa6.92□□□□□ -1.3
TRAF3IP2-201ENST00000340026 NBEAL1Q6ZS30 2694 aa6.92□□□□□ -1.3
TRAF3IP2-201ENST00000340026 Q6ZRX8 168 aa6.91□□□□□ -1.3
TRAF3IP2-201ENST00000340026 IGLV5-48A0A075B6I7 105 aa6.91□□□□□ -1.3
TRAF3IP2-201ENST00000340026 IGKV3D-7A0A0C4DH55 119 aa6.91□□□□□ -1.3
TRAF3IP2-201ENST00000340026 COL6A5A8TX70 2615 aa6.91□□□□□ -1.3
TRAF3IP2-201ENST00000340026 B5MCH6 92 aa6.91□□□□□ -1.3
TRAF3IP2-201ENST00000340026 B9D2Q9BPU9 175 aa6.91□□□□□ -1.3
TRAF3IP2-201ENST00000340026 NOTCH1P46531 2555 aa6.9□□□□□ -1.3
TRAF3IP2-201ENST00000340026 CASC10Q5T4H9 136 aa6.9□□□□□ -1.3
TRAF3IP2-201ENST00000340026 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.3
TRAF3IP2-201ENST00000340026 APLNQ9ULZ1 77 aa6.9□□□□□ -1.3
TRAF3IP2-201ENST00000340026 PRB2P02812 416 aaPredicted RBP6.9□□□□□ -1.31
TRAF3IP2-201ENST00000340026 CRYGAP11844 174 aa6.9□□□□□ -1.31
TRAF3IP2-201ENST00000340026 Q6ZVQ6 151 aa6.9□□□□□ -1.31
TRAF3IP2-201ENST00000340026 LINC01547P58512 204 aaPredicted RBP6.89□□□□□ -1.31
TRAF3IP2-201ENST00000340026 C14orf177Q52M58 125 aa6.88□□□□□ -1.31
TRAF3IP2-201ENST00000340026 MRPL55Q7Z7F7 128 aaKnown RBP6.88□□□□□ -1.31
TRAF3IP2-201ENST00000340026 SERP2Q8N6R1 65 aa6.88□□□□□ -1.31
TRAF3IP2-201ENST00000340026 TNP2Q05952 138 aa6.87□□□□□ -1.31
TRAF3IP2-201ENST00000340026 PKIGQ9Y2B9 76 aa6.87□□□□□ -1.31
TRAF3IP2-201ENST00000340026 C16orf90A8MZG2 172 aa6.87□□□□□ -1.31
TRAF3IP2-201ENST00000340026 M0R2N4 97 aa6.87□□□□□ -1.31
TRAF3IP2-201ENST00000340026 Q8N377 158 aa6.87□□□□□ -1.31
TRAF3IP2-201ENST00000340026 J3QL48 77 aa6.86□□□□□ -1.31
TRAF3IP2-201ENST00000340026 Q9BRP9 147 aa6.86□□□□□ -1.31
TRAF3IP2-201ENST00000340026 KRTAP1-5Q9BYS1 174 aa6.86□□□□□ -1.31
TRAF3IP2-201ENST00000340026 A0A087WVE0 104 aa6.85□□□□□ -1.31
TRAF3IP2-201ENST00000340026 ETDCA0A1B0GVM5 59 aa6.85□□□□□ -1.31
TRAF3IP2-201ENST00000340026 SMIM20Q8N5G0 67 aa6.85□□□□□ -1.31
TRAF3IP2-201ENST00000340026 C9orf153Q5TBE3 101 aa6.84□□□□□ -1.31
TRAF3IP2-201ENST00000340026 FAM168BA1KXE4 195 aa6.84□□□□□ -1.31
TRAF3IP2-201ENST00000340026 NUPR2A6NF83 97 aa6.82□□□□□ -1.32
TRAF3IP2-201ENST00000340026 REG3GQ6UW15 175 aa6.82□□□□□ -1.32
TRAF3IP2-201ENST00000340026 FAM19A1Q7Z5A9 133 aa6.82□□□□□ -1.32
TRAF3IP2-201ENST00000340026 DNAH7Q8WXX0 4024 aa6.82□□□□□ -1.32
TRAF3IP2-201ENST00000340026 H0Y9J4 135 aa6.81□□□□□ -1.32
TRAF3IP2-201ENST00000340026 SS18L2Q9UHA2 77 aa6.81□□□□□ -1.32
TRAF3IP2-201ENST00000340026 SPRR4Q96PI1 79 aa6.8□□□□□ -1.32
TRAF3IP2-201ENST00000340026 DNAH10Q8IVF4 4471 aa6.8□□□□□ -1.32
TRAF3IP2-201ENST00000340026 MGAM2Q2M2H8 2515 aa6.8□□□□□ -1.32
TRAF3IP2-201ENST00000340026 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
TRAF3IP2-201ENST00000340026 RPL37AP8A6NKH3 93 aa6.8□□□□□ -1.32
TRAF3IP2-201ENST00000340026 UBE2DNLQ8IWF7 75 aa6.8□□□□□ -1.32
TRAF3IP2-201ENST00000340026 A0A096LNI7 61 aa6.8□□□□□ -1.32
TRAF3IP2-201ENST00000340026 FAM19A5Q7Z5A7 132 aaPredicted RBP6.8□□□□□ -1.32
TRAF3IP2-201ENST00000340026 VPS13DQ5THJ4 4388 aa6.79□□□□□ -1.32
TRAF3IP2-201ENST00000340026 IGLV8-61A0A075B6I0 122 aa6.79□□□□□ -1.32
TRAF3IP2-201ENST00000340026 HAMPP81172 84 aa6.79□□□□□ -1.32
TRAF3IP2-201ENST00000340026 LRCOL1A6NCL2 159 aa6.79□□□□□ -1.32
TRAF3IP2-201ENST00000340026 EPM2AB3EWF7 344 aa6.79□□□□□ -1.32
TRAF3IP2-201ENST00000340026 MDFIQ99750 246 aa6.79□□□□□ -1.32
TRAF3IP2-201ENST00000340026 STAB2Q8WWQ8 2551 aa6.78□□□□□ -1.32
TRAF3IP2-201ENST00000340026 TRAV7A0A075B6U4 112 aa6.78□□□□□ -1.32
TRAF3IP2-201ENST00000340026 PSCAO43653 123 aa6.78□□□□□ -1.32
TRAF3IP2-201ENST00000340026 C9orf163Q8N9P6 203 aa6.78□□□□□ -1.32
TRAF3IP2-201ENST00000340026 COL7A1Q02388 2944 aa6.78□□□□□ -1.32
TRAF3IP2-201ENST00000340026 FUSP35637 526 aaKnown RBP eCLIP6.78□□□□□ -1.32
TRAF3IP2-201ENST00000340026 Q8NBF4 154 aa6.78□□□□□ -1.32
TRAF3IP2-201ENST00000340026 NBDYA0A0U1RRE5 68 aa6.77□□□□□ -1.33
TRAF3IP2-201ENST00000340026 Q6ZRN7 208 aaPredicted RBP6.77□□□□□ -1.33
TRAF3IP2-201ENST00000340026 LYSTQ99698 3801 aa6.77□□□□□ -1.33
TRAF3IP2-201ENST00000340026 LINC00474Q9P2X8 69 aa6.77□□□□□ -1.33
TRAF3IP2-201ENST00000340026 SMIM29Q86T20 159 aa6.76□□□□□ -1.33
TRAF3IP2-201ENST00000340026 A0A1W2PNN7 141 aa6.76□□□□□ -1.33
TRAF3IP2-201ENST00000340026 TMEM258P61165 79 aa6.76□□□□□ -1.33
TRAF3IP2-201ENST00000340026 NREPQ16612 68 aa6.76□□□□□ -1.33
TRAF3IP2-201ENST00000340026 CSMD3Q7Z407 3707 aa6.76□□□□□ -1.33
TRAF3IP2-201ENST00000340026 PRKDCP78527 4128 aaKnown RBP6.75□□□□□ -1.33
TRAF3IP2-201ENST00000340026 SPRR1BP22528 89 aa6.75□□□□□ -1.33
TRAF3IP2-201ENST00000340026 C1orf137Q5JT78 98 aa6.75□□□□□ -1.33
TRAF3IP2-201ENST00000340026 A0A1W2PNM2 257 aa6.75□□□□□ -1.33
TRAF3IP2-201ENST00000340026 ERC2-IT1O76042 136 aa6.75□□□□□ -1.33
TRAF3IP2-201ENST00000340026 UBE2BP63146 152 aa6.74□□□□□ -1.33
TRAF3IP2-201ENST00000340026 ST20-AS1Q8NBB2 130 aa6.74□□□□□ -1.33
TRAF3IP2-201ENST00000340026 DEFB105AQ8NG35 78 aa6.74□□□□□ -1.33
TRAF3IP2-201ENST00000340026 IGKV4-1P06312 121 aa6.73□□□□□ -1.33
TRAF3IP2-201ENST00000340026 RPS28P62857 69 aaKnown RBP6.73□□□□□ -1.33
TRAF3IP2-201ENST00000340026 KLKP1Q107X0 134 aa6.72□□□□□ -1.33
TRAF3IP2-201ENST00000340026 BPY2O14599 106 aa6.72□□□□□ -1.33
TRAF3IP2-201ENST00000340026 F8WEM9 126 aa6.7□□□□□ -1.34
TRAF3IP2-201ENST00000340026 DNAH6Q9C0G6 4158 aa6.7□□□□□ -1.34
TRAF3IP2-201ENST00000340026 LINC00476Q8WZB0 136 aa6.69□□□□□ -1.34
TRAF3IP2-201ENST00000340026 STARD9Q9P2P6 4700 aa6.69□□□□□ -1.34
TRAF3IP2-201ENST00000340026 IGKV2-24A0A0C4DH68 120 aa6.69□□□□□ -1.34
TRAF3IP2-201ENST00000340026 KRTAP13-1Q8IUC0 172 aa6.69□□□□□ -1.34
TRAF3IP2-201ENST00000340026 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
TRAF3IP2-201ENST00000340026 C3orf84H3BNL1 204 aa6.69□□□□□ -1.34
TRAF3IP2-201ENST00000340026 NDUFC1O43677 76 aa6.67□□□□□ -1.34
TRAF3IP2-201ENST00000340026 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.67□□□□□ -1.34
TRAF3IP2-201ENST00000340026 IGFL1Q6UW32 110 aa6.67□□□□□ -1.34
TRAF3IP2-201ENST00000340026 SPACA4Q8TDM5 124 aa6.67□□□□□ -1.34
TRAF3IP2-201ENST00000340026 SCXQ7RTU7 201 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms